NP-MRD: Showing NP-Card for 3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate (NP0253040)

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Record Information

Version

2.0

Created at

2022-09-07 16:47:18 UTC

Updated at

2022-09-07 16:47:18 UTC

NP-MRD ID

NP0253040

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate

Description

3-(Acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4,4a,5,6,8a-octahydronaphthalen-2-yl 2-methylbut-2-enoate belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. 3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate is found in Waitzia acuminata. Based on a literature review very few articles have been published on 3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4,4a,5,6,8a-octahydronaphthalen-2-yl 2-methylbut-2-enoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309072218472D          

 37 38  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652309072218472D          

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    4.2868    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8163   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0416   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  3  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
  8 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
 15 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
 26 28  2  0  0  0  0
 28 29  1  4  0  0  0
 22 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  2  0  0  0  0
 30 35  1  0  0  0  0
 14 35  1  0  0  0  0
 35 36  1  0  0  0  0
 35 37  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0253040

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC=C(C)C(=O)OC1CC2(COC(C)=O)C(CC(O)C(C)=C2CCC(C)(O)C=C)C(C)(C)C1OC(C)=O

> <INCHI_IDENTIFIER>
InChI=1S/C29H44O8/c1-10-17(3)26(33)37-23-15-29(16-35-19(5)30)21(12-13-28(9,34)11-2)18(4)22(32)14-24(29)27(7,8)25(23)36-20(6)31/h10-11,22-25,32,34H,2,12-16H2,1,3-9H3

> <INCHI_KEY>
WKWBYQWUOKRHBL-UHFFFAOYSA-N

> <FORMULA>
C29H44O8

> <MOLECULAR_WEIGHT>
520.663

> <EXACT_MASS>
520.303618377

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
81

> <JCHEM_AVERAGE_POLARIZABILITY>
56.61972713986563

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4,4a,5,6,8a-octahydronaphthalen-2-yl 2-methylbut-2-enoate

> <JCHEM_LOGP>
3.480719265666667

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
18.488220744788055

> <JCHEM_PKA_STRONGEST_ACIDIC>
18.36550141264748

> <JCHEM_PKA_STRONGEST_BASIC>
-0.9980307376726069

> <JCHEM_POLAR_SURFACE_AREA>
119.36000000000001

> <JCHEM_REFRACTIVITY>
140.1842

> <JCHEM_ROTATABLE_BOND_COUNT>
12

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 07-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   07-SEP-22         0                                  
HETATM    1  C   UNK     0      -2.667   6.160   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.334   5.390   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.334   3.850   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.874   3.850   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       0.206   3.850   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      -1.334   2.310   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.000  -0.000   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -2.667  -0.000   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      -2.667  -3.080   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.334   0.770   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       2.667   3.080   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       4.001   3.850   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       5.335  -0.000   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       4.001   2.310   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       6.668   2.310   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       8.002   1.540   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       6.668   3.850   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       5.335   4.620   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       5.335  -3.080   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0       6.668  -0.770   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       3.390  -4.440   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       1.944  -4.440   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5    6                                             
CONECT    4    3                                                            
CONECT    5    3                                                            
CONECT    6    3    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   15                                                  
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14                                                       
CONECT   14   13   15   35                                                  
CONECT   15   14    8   16   21                                             
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18                                                            
CONECT   21   15   22                                                       
CONECT   22   21   23   30                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26   29                                                       
CONECT   29   28                                                            
CONECT   30   22   31   35                                                  
CONECT   31   30   32                                                       
CONECT   32   31   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32                                                            
CONECT   35   30   14   36   37                                             
CONECT   36   35                                                            
CONECT   37   35                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   76    0
END

View in JSmol

Synonyms

Value	Source
3-(Acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4,4a,5,6,8a-octahydronaphthalen-2-yl 2-methylbut-2-enoic acid	Generator

Chemical Formula

C₂₉H₄₄O₈

Average Mass

520.6630 Da

Monoisotopic Mass

520.30362 Da

IUPAC Name

3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4,4a,5,6,8a-octahydronaphthalen-2-yl 2-methylbut-2-enoate

Traditional Name

3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate

CAS Registry Number

Not Available

SMILES

CC=C(C)C(=O)OC1CC2(COC(C)=O)C(CC(O)C(C)=C2CCC(C)(O)C=C)C(C)(C)C1OC(C)=O

InChI Identifier

InChI=1S/C29H44O8/c1-10-17(3)26(33)37-23-15-29(16-35-19(5)30)21(12-13-28(9,34)11-2)18(4)22(32)14-24(29)27(7,8)25(23)36-20(6)31/h10-11,22-25,32,34H,2,12-16H2,1,3-9H3

InChI Key

WKWBYQWUOKRHBL-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Waitzia acuminata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Diterpenoids

Alternative Parents

Substituents

Labdane diterpenoid
Diterpenoid
Tricarboxylic acid or derivatives
Fatty acid ester
Fatty acyl
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Tertiary alcohol
Carboxylic acid ester
Secondary alcohol
Carboxylic acid derivative
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Organooxygen compound
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.48	ChemAxon
pKa (Strongest Acidic)	18.37	ChemAxon
pKa (Strongest Basic)	-1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	119.36 Å²	ChemAxon
Rotatable Bond Count	12	ChemAxon
Refractivity	140.18 m³·mol⁻¹	ChemAxon
Polarizability	56.62 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162912007

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate (NP0253040)

MOL for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

3D MOL for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

3D SDF for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

3D-SDF for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

PDB for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

3D PDB for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

SMILES for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

INCHI for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

Structure for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)

3D Structure for NP0253040 (3-(acetyloxy)-8a-[(acetyloxy)methyl]-6-hydroxy-8-(3-hydroxy-3-methylpent-4-en-1-yl)-4,4,7-trimethyl-1,2,3,4a,5,6-hexahydronaphthalen-2-yl 2-methylbut-2-enoate)