NP-MRD: Showing NP-Card for 3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one (NP0252597)

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Record Information

Version

2.0

Created at

2022-09-07 16:09:39 UTC

Updated at

2022-09-07 16:09:40 UTC

NP-MRD ID

NP0252597

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one

Description

3-(2,4-Dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methyl-4H,8H-pyrano[2,3-f]chromen-4-one belongs to the class of organic compounds known as pyranoisoflavonoids. These are isoflavonoids that contain a pyran ring fused to either of the A, B, or C ring of the isoflavonoid skeleton. 3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one is found in Lupinus luteus. 3-(2,4-Dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methyl-4H,8H-pyrano[2,3-f]chromen-4-one is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652310051707112D          

 27 30  0  0  0  0            999 V2000
    4.6465   -0.1178    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1730   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3480   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1730    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3645   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6465    0.9428    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5855    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9355    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3645    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1105    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3480    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0145    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5032    1.7553    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4105    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9355    1.8414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -1.7309    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1105   -1.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270    1.1270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020   -0.3020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  2  2  0  0  0  0
  5  4  2  0  0  0  0
 10  2  1  0  0  0  0
 10  6  2  0  0  0  0
 11  3  1  0  0  0  0
 12  4  1  0  0  0  0
 13  8  2  0  0  0  0
 13 11  1  0  0  0  0
 14  6  1  0  0  0  0
 14 11  2  0  0  0  0
 15  7  2  0  0  0  0
 16  7  1  0  0  0  0
 16 12  2  0  0  0  0
 17 15  1  0  0  0  0
 18 13  1  0  0  0  0
 18 17  1  0  0  0  0
 19 12  1  0  0  0  0
 19 17  2  0  0  0  0
 20  1  1  0  0  0  0
 20  5  1  0  0  0  0
 20  9  1  0  0  0  0
 21  9  1  0  0  0  0
 22 10  1  0  0  0  0
 23 14  1  0  0  0  0
 24 15  1  0  0  0  0
 25 18  2  0  0  0  0
 26  8  1  0  0  0  0
 26 19  1  0  0  0  0
 27 16  1  0  0  0  0
 27 20  1  0  0  0  0
M  END

     RDKit          3D

 43 46  0  0  0  0  0  0  0  0999 V2000
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   -4.6269    0.3941    0.0751 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.6383    0.6173   -1.0456 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3693    1.7421   -0.7639 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8397    1.5733    0.3914 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5254    1.5537    0.4137 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7741    0.3328    0.1149 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5286   -0.7804   -0.1913 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8963   -1.9953   -0.4866 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5280   -2.0295   -0.4571 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0979   -3.2379   -0.7505 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2097   -0.9056   -0.1467 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5813   -0.9751   -0.1282 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1101   -2.0645   -0.3913 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3278    0.1657    0.1804 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7528    0.0474    0.2079 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3145   -0.9276    1.0157 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6730   -1.0674    1.0881 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5518   -0.2534    0.3679 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9398   -0.4187    0.4589 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9699    0.7092   -0.4287 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6038    0.8599   -0.5098 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0554    1.8485   -1.3317 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6507    1.3212    0.4575 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3190    1.3804    0.4398 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3981    0.2996    0.1454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9106   -0.7537   -0.2190 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8353   -0.5929    1.9460 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6471    1.0133    1.9202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4033   -0.4009    1.0027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2758   -0.2844   -1.0805 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1403    0.6736   -2.0381 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8245    2.5545   -0.8491 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3556    2.4963    0.6134 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9232    2.4253    0.6494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5052   -2.8579   -0.7239 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4228   -4.0562   -0.9857 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6724   -1.5995    1.6076 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1712   -1.8191    1.7103 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3340   -1.0792   -0.2306 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6380    1.3617   -1.0075 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6124    2.4637   -1.8845 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2588    2.1860    0.6931 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1
  2  3  1  0
  3  4  1  0
  2 27  1  0
 27  8  1  0
  8  7  2  0
  7  6  1  0
  6  5  2  0
  7 26  1  0
 26 12  2  0
 12 10  1  0
 10 11  1  0
 10  9  2  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 15 24  2  0
 24 25  1  0
 15 16  1  0
 16 22  2  0
 22 23  1  0
 22 21  1  0
 21 19  2  0
 19 20  1  0
 19 18  1  0
 18 17  2  0
  5  2  1  0
 25 26  1  0
 17 16  1  0
  9  8  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  3 31  1  0
  3 32  1  0
  4 33  1  0
  6 35  1  0
  5 34  1  0
 11 37  1  0
  9 36  1  0
 24 43  1  0
 23 42  1  0
 21 41  1  0
 20 40  1  0
 18 39  1  0
 17 38  1  0
M  END


  Mrv1652310051707112D          

 27 30  0  0  0  0            999 V2000
    4.6465   -0.1178    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1730   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3480   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1730    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3645   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6465    0.9428    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5855    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9355    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3645    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1105    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3480    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0145    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5032    1.7553    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4105    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9355    1.8414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -1.7309    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1105   -1.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270    1.1270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020   -0.3020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  2  2  0  0  0  0
  5  4  2  0  0  0  0
 10  2  1  0  0  0  0
 10  6  2  0  0  0  0
 11  3  1  0  0  0  0
 12  4  1  0  0  0  0
 13  8  2  0  0  0  0
 13 11  1  0  0  0  0
 14  6  1  0  0  0  0
 14 11  2  0  0  0  0
 15  7  2  0  0  0  0
 16  7  1  0  0  0  0
 16 12  2  0  0  0  0
 17 15  1  0  0  0  0
 18 13  1  0  0  0  0
 18 17  1  0  0  0  0
 19 12  1  0  0  0  0
 19 17  2  0  0  0  0
 20  1  1  0  0  0  0
 20  5  1  0  0  0  0
 20  9  1  0  0  0  0
 21  9  1  0  0  0  0
 22 10  1  0  0  0  0
 23 14  1  0  0  0  0
 24 15  1  0  0  0  0
 25 18  2  0  0  0  0
 26  8  1  0  0  0  0
 26 19  1  0  0  0  0
 27 16  1  0  0  0  0
 27 20  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0252597

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1(CO)OC2=C(C=C1)C1=C(C(O)=C2)C(=O)C(=CO1)C1=C(O)C=C(O)C=C1

> <INCHI_IDENTIFIER>
InChI=1S/C20H16O7/c1-20(9-21)5-4-12-16(27-20)7-15(24)17-18(25)13(8-26-19(12)17)11-3-2-10(22)6-14(11)23/h2-8,21-24H,9H2,1H3

> <INCHI_KEY>
VXHLKWUURGGYHM-UHFFFAOYSA-N

> <FORMULA>
C20H16O7

> <MOLECULAR_WEIGHT>
368.341

> <EXACT_MASS>
368.089602855

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
43

> <JCHEM_AVERAGE_POLARIZABILITY>
37.30809612549325

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methyl-4H,8H-pyrano[2,3-f]chromen-4-one

> <ALOGPS_LOGP>
2.69

> <JCHEM_LOGP>
2.9305858249999996

> <ALOGPS_LOGS>
-4.10

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
8.563311689045687

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.503296630965608

> <JCHEM_PKA_STRONGEST_BASIC>
-3.0991195464839754

> <JCHEM_POLAR_SURFACE_AREA>
116.45000000000002

> <JCHEM_REFRACTIVITY>
97.61999999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.96e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-OCT-17   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-OCT-17         0                                  
HETATM    1  C   UNK     0       8.673  -0.220   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.056  -0.564   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.516  -0.564   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.184   2.104   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       6.724   2.104   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -4.056   2.104   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.414  -1.897   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.564   2.104   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.673   1.760   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -4.826   0.770   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.746   0.770   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.414   0.770   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.206   0.770   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.516   2.104   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.874  -1.897   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.184  -0.564   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.104  -0.564   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.564  -0.564   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.874   0.770   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       7.494   0.770   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       8.406   3.276   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0      -6.366   0.770   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0      -1.746   3.437   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0       2.104  -3.231   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0      -0.206  -1.897   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0       2.104   2.104   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       6.724  -0.564   0.000  0.00  0.00           O+0
CONECT    1   20                                                            
CONECT    2    3   10                                                       
CONECT    3    2   11                                                       
CONECT    4    5   12                                                       
CONECT    5    4   20                                                       
CONECT    6   10   14                                                       
CONECT    7   15   16                                                       
CONECT    8   13   26                                                       
CONECT    9   20   21                                                       
CONECT   10    2    6   22                                                  
CONECT   11    3   13   14                                                  
CONECT   12    4   16   19                                                  
CONECT   13    8   11   18                                                  
CONECT   14    6   11   23                                                  
CONECT   15    7   17   24                                                  
CONECT   16    7   12   27                                                  
CONECT   17   15   18   19                                                  
CONECT   18   13   17   25                                                  
CONECT   19   12   17   26                                                  
CONECT   20    1    5    9   27                                             
CONECT   21    9                                                            
CONECT   22   10                                                            
CONECT   23   14                                                            
CONECT   24   15                                                            
CONECT   25   18                                                            
CONECT   26    8   19                                                       
CONECT   27   16   20                                                       
MASTER        0    0    0    0    0    0    0    0   27    0   60    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₁₆O₇

Average Mass

368.3410 Da

Monoisotopic Mass

368.08960 Da

IUPAC Name

3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methyl-4H,8H-pyrano[2,3-f]chromen-4-one

Traditional Name

3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one

CAS Registry Number

Not Available

SMILES

CC1(CO)OC2=C(C=C1)C1=C(C(O)=C2)C(=O)C(=CO1)C1=C(O)C=C(O)C=C1

InChI Identifier

InChI=1S/C20H16O7/c1-20(9-21)5-4-12-16(27-20)7-15(24)17-18(25)13(8-26-19(12)17)11-3-2-10(22)6-14(11)23/h2-8,21-24H,9H2,1H3

InChI Key

VXHLKWUURGGYHM-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Lupinus luteus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as pyranoisoflavonoids. These are isoflavonoids that contain a pyran ring fused to either of the A, B, or C ring of the isoflavonoid skeleton.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

Pyranoisoflavonoids

Direct Parent

Pyranoisoflavonoids

Alternative Parents

Substituents

Pyranoisoflavonoid
Isoflavone
Hydroxyisoflavonoid
Pyranochromene
Chromone
Benzopyran
1-benzopyran
Resorcinol
Alkyl aryl ether
Pyranone
1-hydroxy-4-unsubstituted benzenoid
Phenol
1-hydroxy-2-unsubstituted benzenoid
Benzenoid
Monocyclic benzene moiety
Pyran
Vinylogous acid
Heteroaromatic compound
Oxacycle
Organoheterocyclic compound
Ether
Hydrocarbon derivative
Organooxygen compound
Primary alcohol
Alcohol
Organic oxygen compound
Organic oxide
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.69	ALOGPS
logP	2.93	ChemAxon
logS	-4.1	ALOGPS
pKa (Strongest Acidic)	7.5	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	116.45 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	97.62 m³·mol⁻¹	ChemAxon
Polarizability	37.31 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0147975

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one (NP0252597)

MOL for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

3D MOL for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

3D SDF for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

3D-SDF for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

PDB for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

3D PDB for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

SMILES for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

INCHI for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

Structure for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)

3D Structure for NP0252597 (3-(2,4-dihydroxyphenyl)-5-hydroxy-8-(hydroxymethyl)-8-methylpyrano[2,3-f]chromen-4-one)