NP-MRD: Showing NP-Card for 4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one (NP0251752)

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Record Information

Version

2.0

Created at

2022-09-07 15:02:31 UTC

Updated at

2022-09-07 15:02:31 UTC

NP-MRD ID

NP0251752

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one

Description

4-(2-{2-[(5-Amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalene-1-carbonyl)-5-hydroxy-2,3-dihydro-1H-pyrrol-3-one belongs to the class of organic compounds known as aminoglycosides. These are molecules or a portion of a molecule composed of amino-modified sugars. Based on a literature review very few articles have been published on 4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalene-1-carbonyl)-5-hydroxy-2,3-dihydro-1H-pyrrol-3-one.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309072217022D          

 34 37  0  0  0  0            999 V2000
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M  END

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M  END


  Mrv1652309072217022D          

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 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 15 20  1  0  0  0  0
 20 21  2  0  0  0  0
 11 22  1  0  0  0  0
  2 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 30 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  1  0  0  0  0
 27 34  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0251752

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(CC1C(C)=CC2CC(C)CCC2C1(C)C(=O)C1=C(O)NCC1=O)OC1CCC(N)C(C)O1

> <INCHI_IDENTIFIER>
InChI=1S/C27H42N2O5/c1-14-6-7-19-18(10-14)11-15(2)20(12-16(3)33-23-9-8-21(28)17(4)34-23)27(19,5)25(31)24-22(30)13-29-26(24)32/h11,14,16-21,23,29,32H,6-10,12-13,28H2,1-5H3

> <INCHI_KEY>
IACYFXLDBQQJPE-UHFFFAOYSA-N

> <FORMULA>
C27H42N2O5

> <MOLECULAR_WEIGHT>
474.642

> <EXACT_MASS>
474.30937246

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
76

> <JCHEM_AVERAGE_POLARIZABILITY>
53.65035269783489

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalene-1-carbonyl)-5-hydroxy-2,3-dihydro-1H-pyrrol-3-one

> <JCHEM_LOGP>
2.0138617374882783

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
7.23935973884514

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.2776774214679447

> <JCHEM_PKA_STRONGEST_BASIC>
9.77472000477588

> <JCHEM_POLAR_SURFACE_AREA>
110.88000000000001

> <JCHEM_REFRACTIVITY>
141.4641

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2H-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 07-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   07-SEP-22         0                                  
HETATM    1  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.002  -0.000   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.657  -4.260   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.677  -4.260   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       0.161  -3.992   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       2.204  -5.707   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.685  -6.131   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       4.898  -5.183   0.000  0.00  0.00           O+0
HETATM   18  N   UNK     0       3.738  -7.670   0.000  0.00  0.00           N+0
HETATM   19  C   UNK     0       2.291  -8.197   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.343  -6.984   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      -0.196  -7.037   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -2.667  -3.080   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   31  N   UNK     0      -8.002  -0.000   0.000  0.00  0.00           N+0
HETATM   32  C   UNK     0      -5.335  -0.000   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -5.335   1.540   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      -4.001  -0.770   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   22                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   10                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9    4   11                                                  
CONECT   11   10   12   13   22                                             
CONECT   12   11                                                            
CONECT   13   11   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   20                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   15   21                                                  
CONECT   21   20                                                            
CONECT   22   11    2   23                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26   28   34                                                  
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32   27                                                       
MASTER        0    0    0    0    0    0    0    0   34    0   74    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₇H₄₂N₂O₅

Average Mass

474.6420 Da

Monoisotopic Mass

474.30937 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CC(CC1C(C)=CC2CC(C)CCC2C1(C)C(=O)C1=C(O)NCC1=O)OC1CCC(N)C(C)O1

InChI Identifier

InChI=1S/C27H42N2O5/c1-14-6-7-19-18(10-14)11-15(2)20(12-16(3)33-23-9-8-21(28)17(4)34-23)27(19,5)25(31)24-22(30)13-29-26(24)32/h11,14,16-21,23,29,32H,6-10,12-13,28H2,1-5H3

InChI Key

IACYFXLDBQQJPE-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as aminoglycosides. These are molecules or a portion of a molecule composed of amino-modified sugars.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbohydrates and carbohydrate conjugates

Direct Parent

Aminoglycosides

Alternative Parents

Substituents

Aminoglycoside core
Oxane
Vinylogous amide
Vinylogous acid
Pyrroline
Cyclic ketone
Ketone
Ketene acetal or derivatives
Oxacycle
Azacycle
Organoheterocyclic compound
Secondary amine
Secondary aliphatic amine
Alkanolamine
Acetal
Organic nitrogen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Primary amine
Organonitrogen compound
Primary aliphatic amine
Carbonyl group
Amine
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

167071

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

192504

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one (NP0251752)

MOL for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

3D MOL for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

3D SDF for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

3D-SDF for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

PDB for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

3D PDB for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

SMILES for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

INCHI for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

Structure for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)

3D Structure for NP0251752 (4-(2-{2-[(5-amino-6-methyloxan-2-yl)oxy]propyl}-1,3,6-trimethyl-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl)-5-hydroxy-1,2-dihydropyrrol-3-one)