NP-MRD: Showing NP-Card for n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid (NP0250797)

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Record Information

Version

2.0

Created at

2022-09-07 13:45:52 UTC

Updated at

2022-09-07 13:45:52 UTC

NP-MRD ID

NP0250797

Secondary Accession Numbers

None

Natural Product Identification

Common Name

n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid

Description

N-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid belongs to the class of organic compounds known as hexoses. These are monosaccharides in which the sugar unit is a is a six-carbon containing moeity. N-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid is a very strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004241502132D          

 27 27  0  0  0  0            999 V2000
    1.4289   -2.4158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414   -1.7013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664   -1.7013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789   -2.4158    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789   -0.9868    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664   -0.2724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414   -0.2724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.9868    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.4421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6039    0.4421    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414    1.1566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    1.8711    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414    2.5855    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414    4.0145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6039    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1914    4.0145    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664    2.5855    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789    1.8711    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664    4.0145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3164    4.0145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664    1.1566    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789    0.4421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    0.4421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3164   -0.2724    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 13 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  1  0  0  0  0
 11 24  1  0  0  0  0
 24 25  1  0  0  0  0
  6 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END

     RDKit          3D

 58 58  0  0  0  0  0  0  0  0999 V2000
    7.3431   -0.9781   -0.1100 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0189   -1.0262   -0.8023 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8900   -0.7008    0.0963 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1884   -0.4297    1.3087 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5399   -0.6850   -0.3452 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.4356   -0.3740    0.5040 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6736    0.8563    0.0590 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6072    2.0401   -0.1361 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8218    3.1668   -0.2971 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8383    0.6577   -0.9977 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1445   -0.3167   -0.8333 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0107    0.1682    0.0811 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3010    0.4282   -0.2831 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7299    1.8545   -0.0776 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.6760    2.2970    1.2118 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8916    2.7671   -0.9906 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9510    2.2952   -2.3572 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1864   -0.4703    0.5440 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0755   -0.2699    1.9663 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5942   -0.5697    0.0638 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.3045    0.5645    0.3752 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3096   -1.7836    0.6720 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5884   -1.8980    0.1705 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5210   -1.6296   -0.5043 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3557   -2.6619   -0.2133 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4636   -1.5025    0.6721 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1781   -2.6872    0.7759 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8250    0.0245   -0.2049 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0256   -1.7786   -0.5190 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2102   -1.1580    0.9830 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9016   -2.0530   -1.2359 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9868   -0.2740   -1.6400 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3663   -0.9153   -1.3452 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8549   -0.1609    1.5263 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0321    1.1523    0.9266 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3442    1.8775   -0.9231 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1808    2.1792    0.8154 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7120    3.6956    0.5117 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5860   -0.4628   -1.8579 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5512    0.1942   -1.3379 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7574    1.9980   -0.4561 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3413    3.2214    1.3130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8521    2.8008   -0.6817 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3055    3.7958   -0.9829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8398    1.7928   -2.5684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6904    3.0021   -3.0481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7351   -1.5113    0.3829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1188   -1.1816    2.4946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7965    0.3715    2.3490 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6131   -0.7862   -1.0456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7434    0.5078    1.2656 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7644   -2.7165    0.3971 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2897   -1.7371    1.7822 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1730   -1.1409    0.3535 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1425   -1.9834   -1.3582 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1462   -3.5035   -0.6724 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8446   -1.3612    1.5815 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4769   -3.0019   -0.1180 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  7 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
 13 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  1  0
 11 24  1  0
 24 25  1  0
 24 26  1  0
 26 27  1  0
 26  6  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  2 31  1  0
  2 32  1  0
  5 33  1  0
  6 34  1  1
  7 35  1  1
  8 36  1  0
  8 37  1  0
  9 38  1  0
 11 39  1  6
 13 40  1  6
 14 41  1  6
 15 42  1  0
 16 43  1  0
 16 44  1  0
 17 45  1  0
 17 46  1  0
 18 47  1  1
 19 48  1  0
 19 49  1  0
 20 50  1  6
 21 51  1  0
 22 52  1  0
 22 53  1  0
 23 54  1  0
 24 55  1  6
 25 56  1  0
 26 57  1  1
 27 58  1  0
M  END


  Mrv1533004241502132D          

 27 27  0  0  0  0            999 V2000
    1.4289   -2.4158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414   -1.7013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664   -1.7013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789   -2.4158    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789   -0.9868    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664   -0.2724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414   -0.2724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.9868    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.4421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6039    0.4421    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414    1.1566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    1.8711    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414    2.5855    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8414    4.0145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6039    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1914    4.0145    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664    2.5855    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789    1.8711    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664    4.0145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3164    4.0145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664    1.1566    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0789    0.4421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    0.4421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3164   -0.2724    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 13 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  1  0  0  0  0
 11 24  1  0  0  0  0
 24 25  1  0  0  0  0
  6 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0250797

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCC(=O)NC1C(CO)OC(OC(C(O)CN)C(N)C(O)CO)C(O)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C15H31N3O9/c1-2-9(23)18-11-8(5-20)26-15(13(25)12(11)24)27-14(6(21)3-16)10(17)7(22)4-19/h6-8,10-15,19-22,24-25H,2-5,16-17H2,1H3,(H,18,23)

> <INCHI_KEY>
JFNOZOIQSSNDRN-UHFFFAOYSA-N

> <FORMULA>
C15H31N3O9

> <MOLECULAR_WEIGHT>
397.425

> <EXACT_MASS>
397.20602959

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
58

> <JCHEM_AVERAGE_POLARIZABILITY>
39.30233793406457

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
9

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
N-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanamide

> <ALOGPS_LOGP>
-2.78

> <JCHEM_LOGP>
-5.302117434333333

> <ALOGPS_LOGS>
-0.50

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
2

> <JCHEM_PKA>
13.02975799310812

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.242930602087334

> <JCHEM_PKA_STRONGEST_BASIC>
9.547660081791328

> <JCHEM_POLAR_SURFACE_AREA>
220.97999999999996

> <JCHEM_REFRACTIVITY>
89.86009999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
10

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.26e+02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
N-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanamide

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-APR-15         0                                  
HETATM    1  C   UNK     0       2.667  -4.509   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.437  -3.176   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.977  -3.176   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       5.747  -4.509   0.000  0.00  0.00           O+0
HETATM    5  N   UNK     0       5.747  -1.842   0.000  0.00  0.00           N+0
HETATM    6  C   UNK     0       4.977  -0.508   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.437  -0.508   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       2.667  -1.842   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       2.667   0.825   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       1.127   0.825   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       3.437   2.159   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       2.667   3.493   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       3.437   4.826   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.667   6.160   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       3.437   7.494   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       1.127   6.160   0.000  0.00  0.00           C+0
HETATM   17  N   UNK     0       0.357   7.494   0.000  0.00  0.00           N+0
HETATM   18  C   UNK     0       4.977   4.826   0.000  0.00  0.00           C+0
HETATM   19  N   UNK     0       5.747   3.493   0.000  0.00  0.00           N+0
HETATM   20  C   UNK     0       5.747   6.160   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       4.977   7.494   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       7.287   6.160   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       8.057   7.494   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0       4.977   2.159   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       5.747   0.825   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       7.287   0.825   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       8.057  -0.508   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7   25                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   24                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   18                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16                                                            
CONECT   18   13   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23                                                       
CONECT   23   22                                                            
CONECT   24   11   25                                                       
CONECT   25   24    6   26                                                  
CONECT   26   25   27                                                       
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   54    0
END

View in JSmol

Synonyms

Value	Source
N-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidate	Generator

Chemical Formula

C₁₅H₃₁N₃O₉

Average Mass

397.4250 Da

Monoisotopic Mass

397.20603 Da

IUPAC Name

N-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanamide

Traditional Name

N-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanamide

CAS Registry Number

Not Available

SMILES

CCC(=O)NC1C(CO)OC(OC(C(O)CN)C(N)C(O)CO)C(O)C1O

InChI Identifier

InChI=1S/C15H31N3O9/c1-2-9(23)18-11-8(5-20)26-15(13(25)12(11)24)27-14(6(21)3-16)10(17)7(22)4-19/h6-8,10-15,19-22,24-25H,2-5,16-17H2,1H3,(H,18,23)

InChI Key

JFNOZOIQSSNDRN-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hexoses. These are monosaccharides in which the sugar unit is a is a six-carbon containing moeity.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbohydrates and carbohydrate conjugates

Direct Parent

Hexoses

Alternative Parents

Substituents

Hexose monosaccharide
Oxane
1,3-aminoalcohol
1,2-aminoalcohol
Amino acid or derivatives
Carboxamide group
Secondary alcohol
Secondary carboxylic acid amide
Oxacycle
Organoheterocyclic compound
Polyol
Acetal
Carboxylic acid derivative
Hydrocarbon derivative
Primary aliphatic amine
Organopnictogen compound
Organonitrogen compound
Organic oxide
Carbonyl group
Organic nitrogen compound
Amine
Alcohol
Primary alcohol
Primary amine
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-2.8	ALOGPS
logP	-5.3	ChemAxon
logS	-0.5	ALOGPS
pKa (Strongest Acidic)	12.24	ChemAxon
pKa (Strongest Basic)	9.55	ChemAxon
Physiological Charge	2	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	9	ChemAxon
Polar Surface Area	220.98 Å²	ChemAxon
Rotatable Bond Count	10	ChemAxon
Refractivity	89.86 m³·mol⁻¹	ChemAxon
Polarizability	39.3 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

198409

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid (NP0250797)

MOL for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

3D MOL for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

3D SDF for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

3D-SDF for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

PDB for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

3D PDB for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

SMILES for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

INCHI for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

Structure for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)

3D Structure for NP0250797 (n-{6-[(1,4-diamino-2,5,6-trihydroxyhexan-3-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl}propanimidic acid)