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Record Information
Version2.0
Created at2022-09-07 12:30:41 UTC
Updated at2022-09-07 12:30:41 UTC
NP-MRD IDNP0249836
Secondary Accession NumbersNone
Natural Product Identification
Common Name6-hydroxy-4-[(6e,8e)-2-hydroxy-5,7-dimethyl-4-oxodeca-6,8-dien-1-yl]-4,5-dihydro-3h-pyridin-2-one
Description9-Methylstreptimidone belongs to the class of organic compounds known as piperidinediones. Piperidinediones are compounds containing a piperidine ring which bears two ketones. 6-hydroxy-4-[(6e,8e)-2-hydroxy-5,7-dimethyl-4-oxodeca-6,8-dien-1-yl]-4,5-dihydro-3h-pyridin-2-one was first documented in 2006 (PMID: 16753783). Based on a literature review a significant number of articles have been published on 9-Methylstreptimidone (PMID: 30696946) (PMID: 34520340) (PMID: 25617668) (PMID: 23438151) (PMID: 23035360) (PMID: 22153343).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC17H25NO4
Average Mass307.3900 Da
Monoisotopic Mass307.17836 Da
IUPAC Name6-hydroxy-4-[(6E,8E)-2-hydroxy-5,7-dimethyl-4-oxodeca-6,8-dien-1-yl]-2,3,4,5-tetrahydropyridin-2-one
Traditional Name6-hydroxy-4-[(6E,8E)-2-hydroxy-5,7-dimethyl-4-oxodeca-6,8-dien-1-yl]-4,5-dihydro-3H-pyridin-2-one
CAS Registry NumberNot Available
SMILES
C\C=C\C(\C)=C\C(C)C(=O)CC(O)CC1CC(O)=NC(=O)C1
InChI Identifier
InChI=1S/C17H25NO4/c1-4-5-11(2)6-12(3)15(20)10-14(19)7-13-8-16(21)18-17(22)9-13/h4-6,12-14,19H,7-10H2,1-3H3,(H,18,21,22)/b5-4+,11-6+
InChI KeyATUBIBZJAGAIBW-LJIKRCSCSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
Description Belongs to the class of organic compounds known as piperidinediones. Piperidinediones are compounds containing a piperidine ring which bears two ketones.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPiperidines
Sub ClassPiperidinones
Direct ParentPiperidinediones
Alternative Parents
Substituents
  • Piperidinedione
  • Delta-lactam
  • Beta-hydroxy ketone
  • Carboxylic acid imide
  • Dicarboximide
  • Carboxylic acid imide, n-unsubstituted
  • Secondary alcohol
  • Lactam
  • Ketone
  • Carboxylic acid derivative
  • Azacycle
  • Organopnictogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Organic nitrogen compound
  • Organic oxygen compound
  • Alcohol
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.76ChemAxon
pKa (Strongest Acidic)3.41ChemAxon
pKa (Strongest Basic)-2.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area86.96 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity86.41 m³·mol⁻¹ChemAxon
Polarizability34.02 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00016473
Chemspider ID4900267
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound6373950
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Zhao XL, Wang H, Xue ZL, Li JS, Qi H, Zhang H, Zhao T, Wang JD, Xiang WS: Two new glutarimide antibiotics from Streptomyces sp. HS-NF-780. J Antibiot (Tokyo). 2019 Apr;72(4):241-245. doi: 10.1038/s41429-019-0143-6. Epub 2019 Jan 29. [PubMed:30696946 ]
  2. Jiang M, Xu X, Song J, Li D, Han L, Sun X, Guo L, Xiang W, Zhao J, Wang X: Streptomyces botrytidirepellens sp. nov., a novel actinomycete with antifungal activity against Botrytis cinerea. Int J Syst Evol Microbiol. 2021 Sep;71(9). doi: 10.1099/ijsem.0.005004. [PubMed:34520340 ]
  3. Koide N, Kaneda A, Yokochi T, Umezawa K: Inhibition of RANKL- and LPS-induced osteoclast differentiations by novel NF-kappaB inhibitor DTCM-glutarimide. Int Immunopharmacol. 2015 Mar;25(1):162-8. doi: 10.1016/j.intimp.2015.01.004. Epub 2015 Jan 21. [PubMed:25617668 ]
  4. Wang B, Song Y, Luo M, Chen Q, Ma J, Huang H, Ju J: Biosynthesis of 9-methylstreptimidone involves a new decarboxylative step for polyketide terminal diene formation. Org Lett. 2013 Mar 15;15(6):1278-81. doi: 10.1021/ol400224n. Epub 2013 Feb 25. [PubMed:23438151 ]
  5. Takeiri M, Ota E, Nishiyama S, Kiyota H, Umezawa K: Structure-activity relationship of 9-methylstreptimidone, a compound that induces apoptosis selectively in adult T-cell leukemia cells. Oncol Res. 2012;20(1):7-14. doi: 10.3727/096504012x13425470196056. [PubMed:23035360 ]
  6. Ota E, Takeiri M, Tachibana M, Ishikawa Y, Umezawa K, Nishiyama S: Synthesis and biological evaluation of molecular probes based on the 9-methylstreptimidone derivative DTCM-glutarimide. Bioorg Med Chem Lett. 2012 Jan 1;22(1):164-7. doi: 10.1016/j.bmcl.2011.11.045. Epub 2011 Nov 18. [PubMed:22153343 ]
  7. Takeiri M, Tachibana M, Kaneda A, Ito A, Ishikawa Y, Nishiyama S, Goto R, Yamashita K, Shibasaki S, Hirokata G, Ozaki M, Todo S, Umezawa K: Inhibition of macrophage activation and suppression of graft rejection by DTCM-glutarimide, a novel piperidine derived from the antibiotic 9-methylstreptimidone. Inflamm Res. 2011 Sep;60(9):879-88. doi: 10.1007/s00011-011-0348-z. Epub 2011 May 28. [PubMed:21625968 ]
  8. Ishikawa Y, Tachibana M, Matsui C, Obata R, Umezawa K, Nishiyama S: Synthesis and biological evaluation on novel analogs of 9-methylstreptimidone, an inhibitor of NF-kappaB. Bioorg Med Chem Lett. 2009 Mar 15;19(6):1726-8. doi: 10.1016/j.bmcl.2009.01.107. Epub 2009 Feb 5. [PubMed:19231181 ]
  9. Cheng CL, Liu QY, Chen LH, Jin WZ, Si SY, Li DD: Isolation, structure determination and biological activity of a new glutarimide antibiotic, S632A3. J Asian Nat Prod Res. 2006 Jan-Mar;8(1-2):55-60. doi: 10.1080/10286020500382884. [PubMed:16753783 ]
  10. LOTUS database [Link]