NP-MRD: Showing NP-Card for (1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate (NP0249652)

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Record Information

Version

2.0

Created at

2022-09-07 12:15:59 UTC

Updated at

2022-09-07 12:15:59 UTC

NP-MRD ID

NP0249652

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate

Description

(1S)-1-[(5R)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxo-2,5-dihydrofuran-3-yl]butyl acetate belongs to the class of organic compounds known as ketals. These are acetals derived from ketones by replacement of the oxo group by two hydrocarbyloxy groups R2C(OR)2 ( R not Hydrogen ). This term, once abandoned, has been reinstated as a subclass of acetals. (1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate is found in Delisea pulchra. Based on a literature review very few articles have been published on (1S)-1-[(5R)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxo-2,5-dihydrofuran-3-yl]butyl acetate.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 35 35  0  0  0  0  0  0  0  0999 V2000
   -2.9196   -2.4805   -0.9112 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1456   -1.5119   -1.7713 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0022   -0.1607   -1.2130 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3133    0.0782    0.0626 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3924    1.5083    0.3244 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8916    1.9766    1.5222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0134    3.3995    1.8840 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2687    1.1197    2.3627 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1708   -0.2377    0.0240 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1325    0.6472   -0.0071 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9223    2.5401   -0.0135 Br  0  0  0  0  0  0  0  0  0  0  0  0
    2.4439   -0.0959   -0.0272 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0155    0.1980    1.1793 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1323   -0.4403    1.5795 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2335    0.3532   -1.2465 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0698   -0.0614   -2.7750 Br  0  0  0  0  0  0  0  0  0  0  0  0
    4.8209   -0.6957   -1.5151 Br  0  0  0  0  0  0  0  0  0  0  0  0
    2.0778   -1.4299   -0.0936 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7046   -1.5752   -0.0251 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0862   -2.7049   -0.0085 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6357   -2.4346    0.1607 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9975   -2.3501   -1.0743 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6535   -3.5013   -1.2572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8126   -1.3923   -2.6985 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2425   -1.9840   -2.1970 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0018    0.3762   -1.2311 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4271    0.4405   -2.0004 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6991   -0.4314    0.9424 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8708    4.0794    1.0145 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3352    3.6783    2.7166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0546    3.5480    2.2879 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0012   -0.2714    0.9343 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9869   -1.5409    1.7521 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4627   -0.0736    2.6022 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4164    1.4304   -1.2838 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  2  0
  4  9  1  0
  9 10  2  0
 10 11  1  0
 10 12  1  0
 12 13  1  1
 13 14  1  0
 12 18  1  0
 18 19  1  0
 19 20  2  0
 12 15  1  0
 15 16  1  0
 15 17  1  0
 19  9  1  0
  1 21  1  0
  1 22  1  0
  1 23  1  0
  2 24  1  0
  2 25  1  0
  3 26  1  0
  3 27  1  0
  4 28  1  1
  7 29  1  0
  7 30  1  0
  7 31  1  0
 14 32  1  0
 14 33  1  0
 14 34  1  0
 15 35  1  0
M  END


  Mrv1652309072214162D          

 20 20  0  0  1  0            999 V2000
    1.3870   -1.5832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1015   -1.9957    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1015   -2.8207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8159   -3.2332    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5304   -2.8207    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5304   -1.9957    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8159   -1.5832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2449   -1.5832    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8159   -4.0582    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4834   -4.5431    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2680   -4.2882    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
    3.2284   -5.3278    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0354   -5.4993    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5874   -4.8862    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1422   -6.1482    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3885   -6.4838    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
    3.8096   -6.6332    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
    2.4034   -5.3278    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1485   -4.5431    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3639   -4.2882    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  2  0  0  0  0
  4  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  1  0  0  0
 13 14  1  0  0  0  0
 12 15  1  6  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 12 18  1  0  0  0  0
 18 19  1  0  0  0  0
  9 19  1  0  0  0  0
 19 20  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0249652

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCC[C@H](OC(C)=O)C1=C(Br)[C@@](OC)(OC1=O)C(Br)Br

> <INCHI_IDENTIFIER>
InChI=1S/C12H15Br3O5/c1-4-5-7(19-6(2)16)8-9(13)12(18-3,11(14)15)20-10(8)17/h7,11H,4-5H2,1-3H3/t7-,12+/m0/s1

> <INCHI_KEY>
MSGJXJIOEUCWTA-JVXZTZIISA-N

> <FORMULA>
C12H15Br3O5

> <MOLECULAR_WEIGHT>
478.959

> <EXACT_MASS>
475.846963

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
35

> <JCHEM_AVERAGE_POLARIZABILITY>
34.07511852345942

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S)-1-[(5R)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxo-2,5-dihydrofuran-3-yl]butyl acetate

> <JCHEM_LOGP>
3.3232922439999992

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.35404000888967

> <JCHEM_POLAR_SURFACE_AREA>
61.830000000000005

> <JCHEM_REFRACTIVITY>
83.528

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1S)-1-[(5R)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 07-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   07-SEP-22         0                                  
HETATM    1  C   UNK     0       2.589  -2.955   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.923  -3.725   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.923  -5.265   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.256  -6.035   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       6.590  -5.265   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       6.590  -3.725   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.256  -2.955   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       7.924  -2.955   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       5.256  -7.575   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.502  -8.481   0.000  0.00  0.00           C+0
HETATM   11 Br   UNK     0       7.967  -8.005   0.000  0.00  0.00          Br+0
HETATM   12  C   UNK     0       6.026  -9.945   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       7.533 -10.265   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       8.563  -9.121   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.865 -11.477   0.000  0.00  0.00           C+0
HETATM   16 Br   UNK     0       4.459 -12.103   0.000  0.00  0.00          Br+0
HETATM   17 Br   UNK     0       7.111 -12.382   0.000  0.00  0.00          Br+0
HETATM   18  O   UNK     0       4.486  -9.945   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       4.011  -8.481   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       2.546  -8.005   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5    9                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9    4   10   19                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   15   18                                             
CONECT   13   12   14                                                       
CONECT   14   13                                                            
CONECT   15   12   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15                                                            
CONECT   18   12   19                                                       
CONECT   19   18    9   20                                                  
CONECT   20   19                                                            
MASTER        0    0    0    0    0    0    0    0   20    0   40    0
END

View in JSmol

Synonyms

Value	Source
(1S)-1-[(5R)-4-Bromo-5-(dibromomethyl)-5-methoxy-2-oxo-2,5-dihydrofuran-3-yl]butyl acetic acid	Generator

Chemical Formula

C₁₂H₁₅Br₃O₅

Average Mass

478.9590 Da

Monoisotopic Mass

475.84696 Da

IUPAC Name

(1S)-1-[(5R)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxo-2,5-dihydrofuran-3-yl]butyl acetate

Traditional Name

(1S)-1-[(5R)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate

CAS Registry Number

Not Available

SMILES

CCC[C@H](OC(C)=O)C1=C(Br)[C@@](OC)(OC1=O)C(Br)Br

InChI Identifier

InChI=1S/C12H15Br3O5/c1-4-5-7(19-6(2)16)8-9(13)12(18-3,11(14)15)20-10(8)17/h7,11H,4-5H2,1-3H3/t7-,12+/m0/s1

InChI Key

MSGJXJIOEUCWTA-JVXZTZIISA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Delisea pulchra	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as ketals. These are acetals derived from ketones by replacement of the oxo group by two hydrocarbyloxy groups R2C(OR)2 ( R not Hydrogen ). This term, once abandoned, has been reinstated as a subclass of acetals.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Ethers

Direct Parent

Ketals

Alternative Parents

Substituents

Ketal
2-furanone
Dicarboxylic acid or derivatives
Dihydrofuran
Enoate ester
Vinylogous halide
Alpha,beta-unsaturated carboxylic ester
Carboxylic acid ester
Lactone
Carboxylic acid derivative
Oxacycle
Bromoalkene
Haloalkene
Vinyl bromide
Vinyl halide
Organoheterocyclic compound
Alkyl bromide
Alkyl halide
Organic oxide
Organohalogen compound
Organobromide
Carbonyl group
Hydrocarbon derivative
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.32	ChemAxon
pKa (Strongest Basic)	-4.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	61.83 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	83.53 m³·mol⁻¹	ChemAxon
Polarizability	34.08 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162959838

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate (NP0249652)

MOL for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

3D MOL for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

3D SDF for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

3D-SDF for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

PDB for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

3D PDB for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

SMILES for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

INCHI for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

Structure for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)

3D Structure for NP0249652 ((1s)-1-[(5r)-4-bromo-5-(dibromomethyl)-5-methoxy-2-oxofuran-3-yl]butyl acetate)