NP-MRD: Showing NP-Card for 2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid (NP0249432)

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Record Information

Version

2.0

Created at

2022-09-07 11:59:26 UTC

Updated at

2022-09-07 11:59:27 UTC

NP-MRD ID

NP0249432

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid

Description

2-(Dimethylamino)-3-methyl-N-{5,8,11-trihydroxy-7-[(1H-indol-3-yl)methyl]-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]Hexadeca-1(14),5,8,12,15-pentaen-4-yl}pentanimidic acid belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. 2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid is found in Discaria americana. 2-(Dimethylamino)-3-methyl-N-{5,8,11-trihydroxy-7-[(1H-indol-3-yl)methyl]-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]Hexadeca-1(14),5,8,12,15-pentaen-4-yl}pentanimidic acid is a very strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004161522112D          

 43 46  0  0  0  0            999 V2000
    0.3744   -4.1571    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2226   -4.1515    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0550   -3.9795    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8262   -3.1447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8618   -4.4144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1468   -5.3245    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.8885   -5.9497    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4305   -5.9459    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6073   -3.7722    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5688   -2.9024    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    4.6187   -4.9952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4590   -5.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2206   -5.3958    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    5.8307   -6.3832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    6.0904   -7.8103    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  1  0  0  0  0
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  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
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  6  8  1  0  0  0  0
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  9 10  2  0  0  0  0
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 12 39  1  0  0  0  0
 39 40  2  0  0  0  0
 13 41  1  0  0  0  0
 41 42  1  0  0  0  0
 41 43  1  0  0  0  0
M  END

     RDKit          3D

 88 91  0  0  0  0  0  0  0  0999 V2000
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   -4.3548   -1.3339    1.8206 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1533004161522112D          

 43 46  0  0  0  0            999 V2000
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    2.4305   -5.9459    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6073   -3.7722    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5688   -2.9024    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3911   -4.1515    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.6187   -4.9952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4590   -5.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2206   -5.3958    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.6341   -6.1587    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8307   -6.3832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5781   -7.1665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0904   -7.8103    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8991   -7.5835    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1799   -6.8036    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4219   -8.3620    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8768   -9.0974    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5918   -8.5823    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7822   -8.2757    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.2392   -7.5983    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4554   -7.6912    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0823   -6.7569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2285   -6.6554    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8141   -7.4154    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1157   -8.1833    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4786   -8.7074    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.7833   -8.2635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0120   -8.4831    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5998   -7.9043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3924   -7.1058    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4028   -6.8861    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9906   -7.4650    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3074   -5.9549    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.8542   -5.3274    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5541   -4.4861    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8274   -4.1899    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6094   -3.8185    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7447   -3.3289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  5  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 15 20  1  0  0  0  0
 18 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  2  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  2  0  0  0  0
 33 34  1  0  0  0  0
 34 35  2  0  0  0  0
 35 36  1  0  0  0  0
 36 37  2  0  0  0  0
 29 37  1  0  0  0  0
 32 37  1  0  0  0  0
 27 38  1  0  0  0  0
 38 39  1  0  0  0  0
 12 39  1  0  0  0  0
 39 40  2  0  0  0  0
 13 41  1  0  0  0  0
 41 42  1  0  0  0  0
 41 43  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0249432

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCC(C)C(N(C)C)C(=O)NC1C(OC2=CC=C(C=C2)C(O)CNC(=O)C(CC2=CNC3=CC=CC=C23)NC1=O)C(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C33H45N5O5/c1-7-20(4)29(38(5)6)33(42)37-28-30(19(2)3)43-23-14-12-21(13-15-23)27(39)18-35-31(40)26(36-32(28)41)16-22-17-34-25-11-9-8-10-24(22)25/h8-15,17,19-20,26-30,34,39H,7,16,18H2,1-6H3,(H,35,40)(H,36,41)(H,37,42)

> <INCHI_KEY>
MMMSPIBCDFEOIH-UHFFFAOYSA-N

> <FORMULA>
C33H45N5O5

> <MOLECULAR_WEIGHT>
591.753

> <EXACT_MASS>
591.342069569

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
88

> <JCHEM_AVERAGE_POLARIZABILITY>
63.46111749957241

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2-(dimethylamino)-N-{11-hydroxy-7-[(1H-indol-3-yl)methyl]-5,8-dioxo-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-trien-4-yl}-3-methylpentanamide

> <ALOGPS_LOGP>
3.36

> <JCHEM_LOGP>
3.379968978333331

> <ALOGPS_LOGS>
-4.68

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
12.54367485748546

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.293154863276529

> <JCHEM_PKA_STRONGEST_BASIC>
8.054714196494738

> <JCHEM_POLAR_SURFACE_AREA>
135.79

> <JCHEM_REFRACTIVITY>
164.91750000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.22e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-(dimethylamino)-N-[11-hydroxy-7-(1H-indol-3-ylmethyl)-3-isopropyl-5,8-dioxo-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-trien-4-yl]-3-methylpentanamide

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 16-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   16-APR-15         0                                  
HETATM    1  C   UNK     0       0.699  -7.760   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.282  -7.749   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.836  -7.428   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.409  -5.870   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.342  -8.240   0.000  0.00  0.00           C+0
HETATM    6  N   UNK     0       5.874  -9.939   0.000  0.00  0.00           N+0
HETATM    7  C   UNK     0       7.259 -11.106   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.537 -11.099   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.734  -7.042   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       6.662  -5.418   0.000  0.00  0.00           O+0
HETATM   11  N   UNK     0       8.197  -7.749   0.000  0.00  0.00           N+0
HETATM   12  C   UNK     0       8.621  -9.324   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      10.190  -9.380   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      11.612 -10.072   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      12.384 -11.496   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.884 -11.915   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      10.413 -13.377   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      11.369 -14.579   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      12.878 -14.156   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      13.403 -12.700   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      10.121 -15.609   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      10.970 -16.982   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       8.571 -16.020   0.000  0.00  0.00           C+0
HETATM   24  N   UNK     0       7.060 -15.448   0.000  0.00  0.00           N+0
HETATM   25  C   UNK     0       6.046 -14.183   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       4.583 -14.357   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       5.754 -12.613   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       4.160 -12.423   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       3.386 -13.842   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       3.949 -15.276   0.000  0.00  0.00           C+0
HETATM   31  N   UNK     0       2.760 -16.254   0.000  0.00  0.00           N+0
HETATM   32  C   UNK     0       1.462 -15.425   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -0.022 -15.835   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      -1.120 -14.755   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      -0.733 -13.264   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       0.752 -12.854   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       1.849 -13.935   0.000  0.00  0.00           C+0
HETATM   38  N   UNK     0       6.174 -11.116   0.000  0.00  0.00           N+0
HETATM   39  C   UNK     0       7.194  -9.945   0.000  0.00  0.00           C+0
HETATM   40  O   UNK     0       6.634  -8.374   0.000  0.00  0.00           O+0
HETATM   41  C   UNK     0      10.878  -7.821   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      12.337  -7.128   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      10.723  -6.214   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    9                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9    5   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11   13   39                                                  
CONECT   13   12   14   41                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   20                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   21                                                  
CONECT   19   18   20                                                       
CONECT   20   19   15                                                       
CONECT   21   18   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   38                                                  
CONECT   28   27   29                                                       
CONECT   29   28   30   37                                                  
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33   37                                                  
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   29   32                                                  
CONECT   38   27   39                                                       
CONECT   39   38   12   40                                                  
CONECT   40   39                                                            
CONECT   41   13   42   43                                                  
CONECT   42   41                                                            
CONECT   43   41                                                            
MASTER        0    0    0    0    0    0    0    0   43    0   92    0
END

View in JSmol

Synonyms

Value	Source
2-(Dimethylamino)-3-methyl-N-{5,8,11-trihydroxy-7-[(1H-indol-3-yl)methyl]-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl}pentanimidate	Generator

Chemical Formula

C₃₃H₄₅N₅O₅

Average Mass

591.7530 Da

Monoisotopic Mass

591.34207 Da

IUPAC Name

2-(dimethylamino)-N-{11-hydroxy-7-[(1H-indol-3-yl)methyl]-5,8-dioxo-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-trien-4-yl}-3-methylpentanamide

Traditional Name

2-(dimethylamino)-N-[11-hydroxy-7-(1H-indol-3-ylmethyl)-3-isopropyl-5,8-dioxo-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-trien-4-yl]-3-methylpentanamide

CAS Registry Number

Not Available

SMILES

CCC(C)C(N(C)C)C(=O)NC1C(OC2=CC=C(C=C2)C(O)CNC(=O)C(CC2=CNC3=CC=CC=C23)NC1=O)C(C)C

InChI Identifier

InChI=1S/C33H45N5O5/c1-7-20(4)29(38(5)6)33(42)37-28-30(19(2)3)43-23-14-12-21(13-15-23)27(39)18-35-31(40)26(36-32(28)41)16-22-17-34-25-11-9-8-10-24(22)25/h8-15,17,19-20,26-30,34,39H,7,16,18H2,1-6H3,(H,35,40)(H,36,41)(H,37,42)

InChI Key

MMMSPIBCDFEOIH-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Discaria americana	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Amino acids, peptides, and analogues

Direct Parent

Oligopeptides

Alternative Parents

Substituents

Alpha-oligopeptide
Cyclic alpha peptide
Isoleucine or derivatives
N-acyl-alpha amino acid or derivatives
Macrolactam
Alpha-amino acid amide
3-alkylindole
Alpha-amino acid or derivatives
Indole
Indole or derivatives
Alkyl aryl ether
N-acyl-amine
Fatty amide
Fatty acyl
Benzenoid
Substituted pyrrole
Heteroaromatic compound
Pyrrole
Secondary alcohol
Secondary carboxylic acid amide
Tertiary amine
Lactam
Tertiary aliphatic amine
Carboxamide group
Amino acid or derivatives
Oxacycle
Ether
Azacycle
Organoheterocyclic compound
Organic nitrogen compound
Alcohol
Hydrocarbon derivative
Carbonyl group
Organic oxide
Amine
Organic oxygen compound
Organopnictogen compound
Organooxygen compound
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.36	ALOGPS
logP	3.38	ChemAxon
logS	-4.7	ALOGPS
pKa (Strongest Acidic)	11.29	ChemAxon
pKa (Strongest Basic)	8.05	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	135.79 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	164.92 m³·mol⁻¹	ChemAxon
Polarizability	63.46 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101427824

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid (NP0249432)

MOL for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

3D MOL for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

3D SDF for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

3D-SDF for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

PDB for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

3D PDB for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

SMILES for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

INCHI for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

Structure for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)

3D Structure for NP0249432 (2-(dimethylamino)-3-methyl-n-[5,8,11-trihydroxy-7-(1h-indol-3-ylmethyl)-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,12,15-pentaen-4-yl]pentanimidic acid)