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Record Information
Version2.0
Created at2022-09-07 10:36:58 UTC
Updated at2022-09-07 10:36:58 UTC
NP-MRD IDNP0248369
Secondary Accession NumbersNone
Natural Product Identification
Common Name[(2s,3r,4r,5s,6s)-3,4,5-trihydroxy-6-{3-[(1s)-3-oxo-1h-2-benzofuran-1-yl]propoxy}oxan-2-yl]methyl (2r)-2-hydroxy-2-(4-hydroxy-3-methoxyphenyl)acetate
Description[(2S,3R,4R,5S,6S)-3,4,5-trihydroxy-6-{3-[(1S)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]propoxy}oxan-2-yl]methyl (2R)-2-hydroxy-2-(4-hydroxy-3-methoxyphenyl)acetate belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol. [(2s,3r,4r,5s,6s)-3,4,5-trihydroxy-6-{3-[(1s)-3-oxo-1h-2-benzofuran-1-yl]propoxy}oxan-2-yl]methyl (2r)-2-hydroxy-2-(4-hydroxy-3-methoxyphenyl)acetate is found in Gentiana pyrenaica. Based on a literature review very few articles have been published on [(2S,3R,4R,5S,6S)-3,4,5-trihydroxy-6-{3-[(1S)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]propoxy}oxan-2-yl]methyl (2R)-2-hydroxy-2-(4-hydroxy-3-methoxyphenyl)acetate.
Structure
Thumb
Synonyms
ValueSource
[(2S,3R,4R,5S,6S)-3,4,5-Trihydroxy-6-{3-[(1S)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]propoxy}oxan-2-yl]methyl (2R)-2-hydroxy-2-(4-hydroxy-3-methoxyphenyl)acetic acidGenerator
Chemical FormulaC26H30O12
Average Mass534.5140 Da
Monoisotopic Mass534.17373 Da
IUPAC Name[(2S,3R,4R,5S,6S)-3,4,5-trihydroxy-6-{3-[(1S)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]propoxy}oxan-2-yl]methyl (2R)-2-hydroxy-2-(4-hydroxy-3-methoxyphenyl)acetate
Traditional Name(R)-([(2S,3R,4R,5S,6S)-3,4,5-trihydroxy-6-{3-[(1S)-3-oxo-1H-2-benzofuran-1-yl]propoxy}oxan-2-yl]methyl hydroxy(4-hydroxy-3-methoxyphenyl)acetate)
CAS Registry NumberNot Available
SMILES
COC1=CC(=CC=C1O)[C@@H](O)C(=O)OC[C@@H]1O[C@H](OCCC[C@@H]2OC(=O)C3=CC=CC=C23)[C@@H](O)[C@H](O)[C@H]1O
InChI Identifier
InChI=1S/C26H30O12/c1-34-18-11-13(8-9-16(18)27)20(28)25(33)36-12-19-21(29)22(30)23(31)26(38-19)35-10-4-7-17-14-5-2-3-6-15(14)24(32)37-17/h2-3,5-6,8-9,11,17,19-23,26-31H,4,7,10,12H2,1H3/t17-,19-,20+,21-,22+,23-,26-/m0/s1
InChI KeyBBUADAPAOUAEGC-CTBJMEFASA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Gentiana pyrenaicaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acyl glycosides
Direct ParentFatty acyl glycosides of mono- and disaccharides
Alternative Parents
Substituents
  • Fatty acyl glycoside of mono- or disaccharide
  • Alkyl glycoside
  • Glycosyl compound
  • O-glycosyl compound
  • Isobenzofuranone
  • Benzofuranone
  • Methoxyphenol
  • Phthalide
  • Isocoumaran
  • Phenoxy compound
  • Anisole
  • Methoxybenzene
  • Phenol ether
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Phenol
  • Monocyclic benzene moiety
  • Benzenoid
  • Monosaccharide
  • Dicarboxylic acid or derivatives
  • Oxane
  • Secondary alcohol
  • Lactone
  • Carboxylic acid ester
  • Acetal
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Polyol
  • Ether
  • Organic oxygen compound
  • Alcohol
  • Carbonyl group
  • Organic oxide
  • Aromatic alcohol
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.8ChemAxon
pKa (Strongest Acidic)9.9ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area181.44 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity128.18 m³·mol⁻¹ChemAxon
Polarizability53.39 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound162985038
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]