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Showing NP-Card for (2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol (NP0243880)

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Record Information
Version2.0
Created at2022-09-07 04:31:45 UTC
Updated at2022-09-07 04:31:45 UTC
NP-MRD IDNP0243880
Secondary Accession NumbersNone
Natural Product Identification
Common Name(2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol
Description(2E,8E)-9-(Furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol belongs to the class of organic compounds known as fatty alcohols. These are aliphatic alcohols consisting of a chain of a least six carbon atoms. (2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol is found in Atractylodes lancea. Based on a literature review very few articles have been published on (2E,8E)-9-(Furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol.
Structure
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MOL3D MOLSDFPDBSMILESInChI

MOL for NP0243880 ((2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol)


  Mrv1652309072206312D          

 15 15  0  0  0  0            999 V2000
   -1.5757    8.1268    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8612    7.7143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8612    6.8893    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    6.4768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    5.6518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    4.8268    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    4.0018    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    3.1768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    2.3518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.9393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.1143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2352    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9803   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1553   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0997    0.6294    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  3  0  0  0  0
  6  7  1  0  0  0  0
  7  8  3  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 11 15  1  0  0  0  0
M  END
Download

3D MOL for NP0243880 ((2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol)

     RDKit          3D

 25 25  0  0  0  0  0  0  0  0999 V2000
    7.2238    1.1408   -0.7024 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.7215    0.2132    0.2305 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2305    0.3798    0.2096 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4159   -0.6104   -0.1119 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9832   -0.4549   -0.1333 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7810   -0.3192   -0.1705 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3700   -0.1538   -0.2371 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8295   -0.0130   -0.3147 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2522    0.1334   -0.4204 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0031   -0.5060    0.4515 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4534   -0.3589    0.3465 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1666    0.3794   -0.5671 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5044    0.2187   -0.2804 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5570   -0.6218    0.8108 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3302   -0.9300    1.1373 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5498    1.8531   -0.9028 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0136   -0.7762   -0.1360 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0944    0.3850    1.2425 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7784    1.3288    0.4608 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8324   -1.5690   -0.3676 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7419    0.7325   -1.1670 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5832   -1.1320    1.2370 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7528    0.9782   -1.3666 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3527    0.6605   -0.8022 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4675   -0.9583    1.2999 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  3  0
  6  7  1  0
  7  8  3  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 11  1  0
  1 16  1  0
  2 17  1  0
  2 18  1  0
  3 19  1  0
  4 20  1  0
  9 21  1  0
 10 22  1  0
 12 23  1  0
 13 24  1  0
 14 25  1  0
M  END
Download

3D SDF for NP0243880 ((2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol)


  Mrv1652309072206312D          

 15 15  0  0  0  0            999 V2000
   -1.5757    8.1268    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8612    7.7143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8612    6.8893    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    6.4768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    5.6518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    4.8268    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    4.0018    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    3.1768    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    2.3518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.9393    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.1143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2352    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9803   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1553   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0997    0.6294    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  3  0  0  0  0
  6  7  1  0  0  0  0
  7  8  3  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 11 15  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0243880

> <DATABASE_NAME>
NP-MRD

> <SMILES>
OC\C=C\C#CC#C\C=C\C1=CC=CO1

> <INCHI_IDENTIFIER>
InChI=1S/C13H10O2/c14-11-7-5-3-1-2-4-6-9-13-10-8-12-15-13/h5-10,12,14H,11H2/b7-5+,9-6+

> <INCHI_KEY>
JPWHLNBWBPJJJN-PDTNFJSOSA-N

> <FORMULA>
C13H10O2

> <MOLECULAR_WEIGHT>
198.221

> <EXACT_MASS>
198.068079562

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
25

> <JCHEM_AVERAGE_POLARIZABILITY>
22.946773756734007

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2E,8E)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol

> <JCHEM_LOGP>
2.3509620286666664

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.565557301178693

> <JCHEM_PKA_STRONGEST_BASIC>
-2.5514252364644383

> <JCHEM_POLAR_SURFACE_AREA>
33.370000000000005

> <JCHEM_REFRACTIVITY>
63.028800000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2E,8E)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol

> <JCHEM_VEBER_RULE>
1

$$$$
Download

3D-SDF for NP0243880 ((2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol)

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PDB for NP0243880 ((2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol)
HEADER    PROTEIN                                 07-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   07-SEP-22         0                                  
HETATM    1  O   UNK     0      -2.941  15.170   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      -1.608  14.400   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.608  12.860   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.274  12.090   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.274  10.550   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.274   9.010   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.274   7.470   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.274   5.930   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.274   4.390   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.060   3.620   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.060   2.080   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.306   1.175   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.830  -0.290   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.290  -0.290   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      -0.186   1.175   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   15                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   11                                                       
MASTER        0    0    0    0    0    0    0    0   15    0   30    0
END

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3D PDB for NP0243880 ((2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol)
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SMILES for NP0243880 ((2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol)
OC\C=C\C#CC#C\C=C\C1=CC=CO1
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INCHI for NP0243880 ((2e,8e)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol)
InChI=1S/C13H10O2/c14-11-7-5-3-1-2-4-6-9-13-10-8-12-15-13/h5-10,12,14H,11H2/b7-5+,9-6+
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View in JSmol
SynonymsNot Available
Chemical FormulaC13H10O2
Average Mass198.2210 Da
Monoisotopic Mass198.06808 Da
IUPAC Name(2E,8E)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol
Traditional Name(2E,8E)-9-(furan-2-yl)nona-2,8-dien-4,6-diyn-1-ol
CAS Registry NumberNot Available
SMILES
OC\C=C\C#CC#C\C=C\C1=CC=CO1
InChI Identifier
InChI=1S/C13H10O2/c14-11-7-5-3-1-2-4-6-9-13-10-8-12-15-13/h5-10,12,14H,11H2/b7-5+,9-6+
InChI KeyJPWHLNBWBPJJJN-PDTNFJSOSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Atractylodes lanceaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as fatty alcohols. These are aliphatic alcohols consisting of a chain of a least six carbon atoms.
KingdomOrganic compounds  
Super ClassLipids and lipid-like molecules  
ClassFatty Acyls  
Sub ClassFatty alcohols  
Direct ParentFatty alcohols  
Alternative Parents
Substituents
  • Fatty alcohol
    • 

  • Heteroaromatic compound
    • 

  • Furan
    • 

  • Oxacycle
    • 

  • Organoheterocyclic compound
    • 

  • Organic oxygen compound
    • 

  • Hydrocarbon derivative
    • 

  • Primary alcohol
    • 

  • Organooxygen compound
    • 

  • Alcohol
    • 

  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.35ChemAxon
pKa (Strongest Acidic)15.57ChemAxon
pKa (Strongest Basic)-2.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area33.37 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity63.03 m³·mol⁻¹ChemAxon
Polarizability22.95 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8188538  
KEGG Compound IDC17856  
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10012964  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]