NP-MRD: Showing NP-Card for 3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde (NP0243592)

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Record Information

Version

2.0

Created at

2022-09-07 04:10:18 UTC

Updated at

2022-09-07 04:10:18 UTC

NP-MRD ID

NP0243592

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde

Description

3,6-Dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde belongs to the class of organic compounds known as hydroxybenzaldehydes. These are organic aromatic compounds containing a benzene ring carrying an aldehyde group and a hydroxyl group. 3,6-Dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 43 43  0  0  0  0  0  0  0  0999 V2000
    6.8518   -0.8526    1.2936 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4921    0.5517    0.8301 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5665    0.4912   -0.3716 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3069   -0.2475    0.0297 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3302   -0.3456   -1.1321 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1596   -1.0714   -0.6370 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9390   -0.6496   -0.5832 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5383    0.6437   -1.0182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6785    1.0669   -0.9660 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7873    0.2402   -0.4433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9769    0.7816   -0.4423 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2337    0.1730    0.0214 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2742   -1.1003    0.5277 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0923   -1.8729    0.6186 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4330   -1.7022    0.9712 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5941   -0.9965    0.9028 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5981    0.2909    0.3990 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8043    0.9425    0.3599 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4221    0.9070   -0.0532 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4935    2.2563   -0.5692 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5635    2.9380   -1.0030 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1523   -1.4329    0.3993 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7269   -0.7230    1.9942 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9682   -1.2597    1.8055 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4268    1.0806    0.6141 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0158    1.0615    1.6859 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3508    1.5464   -0.6604 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0690    0.0087   -1.2152 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8072    0.2699    0.8479 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5994   -1.2780    0.2907 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0444    0.6277   -1.5199 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8259   -0.9444   -1.9370 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3773   -2.0962   -0.2741 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1948   -1.3367   -0.1801 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2757    1.3337   -1.4199 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9314    2.0563   -1.3085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6092   -0.7387   -0.0916 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0042    1.8044   -0.8383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0919   -2.8091    0.9854 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3963   -2.7211    1.3639 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5045   -1.4740    1.2531 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0354    1.8333    0.0522 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4946    2.7469   -0.5820 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 13 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 17 19  2  0
 19 20  1  0
 20 21  2  0
 19 12  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  2 25  1  0
  2 26  1  0
  3 27  1  0
  3 28  1  0
  4 29  1  0
  4 30  1  0
  5 31  1  0
  5 32  1  0
  6 33  1  0
  7 34  1  0
  8 35  1  0
  9 36  1  0
 10 37  1  0
 11 38  1  0
 14 39  1  0
 15 40  1  0
 16 41  1  0
 18 42  1  0
 20 43  1  0
M  END


  Mrv1533004191517352D          

 21 21  0  0  0  0            999 V2000
    2.1434   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -7.4250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  6  5  1  4  0  0  0
  6  7  2  0  0  0  0
  8  7  1  4  0  0  0
  8  9  2  0  0  0  0
 10  9  1  4  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 19  2  0  0  0  0
 12 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0243592

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCC=CC=CC=CC1=C(O)C=CC(O)=C1C=O

> <INCHI_IDENTIFIER>
InChI=1S/C18H22O3/c1-2-3-4-5-6-7-8-9-10-11-15-16(14-19)18(21)13-12-17(15)20/h6-14,20-21H,2-5H2,1H3

> <INCHI_KEY>
XWTZRNKHLOKDOQ-UHFFFAOYSA-N

> <FORMULA>
C18H22O3

> <MOLECULAR_WEIGHT>
286.371

> <EXACT_MASS>
286.156894568

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
43

> <JCHEM_AVERAGE_POLARIZABILITY>
33.703217045451666

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde

> <ALOGPS_LOGP>
5.63

> <JCHEM_LOGP>
5.684660586666666

> <ALOGPS_LOGS>
-4.36

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.724529408469843

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.745520003546057

> <JCHEM_PKA_STRONGEST_BASIC>
-5.924528942009725

> <JCHEM_POLAR_SURFACE_AREA>
57.53

> <JCHEM_REFRACTIVITY>
91.0048

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.24e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 19-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-APR-15         0                                  
HETATM    1  C   UNK     0       4.001 -11.550   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.335 -12.320   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.668 -11.550   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       8.002 -12.320   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       9.336 -11.550   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      10.669 -12.320   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      12.003 -11.550   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      13.337 -12.320   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      14.670 -11.550   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      16.004 -12.320   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      17.338 -11.550   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      18.672 -12.320   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      20.005 -11.550   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      20.005 -10.010   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      21.339 -12.320   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      21.339 -13.860   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      20.005 -14.630   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      20.005 -16.170   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      18.672 -13.860   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      17.338 -14.630   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      16.004 -13.860   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   19                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   12   20                                                  
CONECT   20   19   21                                                       
CONECT   21   20                                                            
MASTER        0    0    0    0    0    0    0    0   21    0   42    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₈H₂₂O₃

Average Mass

286.3710 Da

Monoisotopic Mass

286.15689 Da

IUPAC Name

3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde

Traditional Name

3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde

CAS Registry Number

Not Available

SMILES

CCCCCC=CC=CC=CC1=C(O)C=CC(O)=C1C=O

InChI Identifier

InChI=1S/C18H22O3/c1-2-3-4-5-6-7-8-9-10-11-15-16(14-19)18(21)13-12-17(15)20/h6-14,20-21H,2-5H2,1H3

InChI Key

XWTZRNKHLOKDOQ-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hydroxybenzaldehydes. These are organic aromatic compounds containing a benzene ring carrying an aldehyde group and a hydroxyl group.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbonyl compounds

Direct Parent

Hydroxybenzaldehydes

Alternative Parents

Substituents

Hydroxybenzaldehyde
Styrene
Hydroquinone
Benzoyl
1-hydroxy-2-unsubstituted benzenoid
Phenol
Benzenoid
Monocyclic benzene moiety
Vinylogous acid
Organic oxide
Hydrocarbon derivative
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.63	ALOGPS
logP	5.68	ChemAxon
logS	-4.4	ALOGPS
pKa (Strongest Acidic)	8.75	ChemAxon
pKa (Strongest Basic)	-5.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	57.53 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	91 m³·mol⁻¹	ChemAxon
Polarizability	33.7 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

156027

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde (NP0243592)

MOL for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

3D MOL for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

3D SDF for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

3D-SDF for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

PDB for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

3D PDB for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

SMILES for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

INCHI for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

Structure for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)

3D Structure for NP0243592 (3,6-dihydroxy-2-(undeca-1,3,5-trien-1-yl)benzaldehyde)