NP-MRD: Showing NP-Card for dihydroformononetin (NP0243365)

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Record Information

Version

2.0

Created at

2022-09-07 03:53:54 UTC

Updated at

2022-09-07 03:53:54 UTC

NP-MRD ID

NP0243365

Secondary Accession Numbers

None

Natural Product Identification

Common Name

dihydroformononetin

Description

Dihydroformononetin belongs to the class of organic compounds known as 4'-o-methylated isoflavonoids. These are isoflavonoids with methoxy groups attached to the C4' atom of the isoflavonoid backbone. Isoflavonoids are natural products derived from 3-phenylchromen-4-one. Thus, dihydroformononetin is considered to be a flavonoid lipid molecule. dihydroformononetin is found in Eysenhardtia polystachya and Styphnolobium japonicum. Dihydroformononetin is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 34 36  0  0  0  0  0  0  0  0999 V2000
   -6.2002   -1.0196   -0.6948 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1134   -1.2889    0.1281 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7887   -0.9758   -0.1139 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8523   -1.3248    0.8421 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4906   -1.0502    0.6811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0425   -0.4144   -0.4525 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3915   -0.0949   -0.6769 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2006   -1.3675   -0.5248 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5838   -1.1137   -0.4459 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1425   -0.0045    0.1460 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5093    0.1071    0.3281 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0732    1.2127    0.9197 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4610    1.3180    1.1020 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2143    2.2238    1.3318 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8536    2.1053    1.1465 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2803    1.0004    0.5545 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8472    0.8670    0.3556 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0369    1.5359    1.0280 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9942   -0.0710   -1.4008 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3361   -0.3384   -1.2485 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9510   -0.0773   -1.2595 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4112   -1.7840   -1.4437 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1234   -0.8094   -0.1158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1705   -1.8236    1.7404 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7750   -1.3297    1.4393 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5525    0.3556   -1.6822 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9882   -2.0568   -1.3708 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8708   -1.8933    0.3828 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1553   -0.7105   -0.0128 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0111    1.7523    0.3460 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6263    3.1008    1.7954 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1415    2.8836    1.4609 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6280    0.4302   -2.2895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0627   -0.0645   -1.9960 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6 19  1  0
 19 20  2  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 16  2  0
 16 15  1  0
 15 14  2  0
 14 12  1  0
 12 13  1  0
 12 11  2  0
 16 17  1  0
 17 18  2  0
 20  3  1  0
 17  7  1  0
 11 10  1  0
  1 21  1  0
  1 22  1  0
  1 23  1  0
  4 24  1  0
  5 25  1  0
 19 33  1  0
 20 34  1  0
  7 26  1  6
  8 27  1  0
  8 28  1  0
 15 32  1  0
 14 31  1  0
 13 30  1  0
 11 29  1  0
M  END


  Mrv0541 02241208202D          

 20 22  0  0  0  0            999 V2000
   -2.3956    0.3491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6811   -0.0634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9667    0.3491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2522   -0.0634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2522   -0.8884    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1767   -0.8884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8912   -1.3009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6057   -0.8884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6057   -0.0634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8912    0.3491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1767   -0.0634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4623    0.3491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4623    1.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2522    1.5866    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9667    1.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6811    1.5866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3956    1.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1101    1.5866    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3202   -1.3009    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3202   -2.1259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  1 17  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  3 15  2  0  0  0  0
  4  5  2  0  0  0  0
  4 12  1  0  0  0  0
  6  7  1  0  0  0  0
  6 11  2  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  8 19  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 19 20  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0243365

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC=C(C=C1)C1COC2=C(C=CC(O)=C2)C1=O

> <INCHI_IDENTIFIER>
InChI=1S/C16H14O4/c1-19-12-5-2-10(3-6-12)14-9-20-15-8-11(17)4-7-13(15)16(14)18/h2-8,14,17H,9H2,1H3

> <INCHI_KEY>
INYISIYHXQDCPK-UHFFFAOYSA-N

> <FORMULA>
C16H14O4

> <MOLECULAR_WEIGHT>
270.28

> <EXACT_MASS>
270.089208936

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_AVERAGE_POLARIZABILITY>
27.789397238488775

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
7-hydroxy-3-(4-methoxyphenyl)-3,4-dihydro-2H-1-benzopyran-4-one

> <ALOGPS_LOGP>
3.01

> <JCHEM_LOGP>
2.527117491666666

> <ALOGPS_LOGS>
-3.51

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.859226024467638

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.783726759495664

> <JCHEM_PKA_STRONGEST_BASIC>
-4.562453771114429

> <JCHEM_POLAR_SURFACE_AREA>
55.760000000000005

> <JCHEM_REFRACTIVITY>
74.1779

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.44e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
dihydroformononetin

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0      -4.472   0.652   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.138  -0.118   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.805   0.652   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.471  -0.118   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      -0.471  -1.658   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       2.197  -1.658   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.530  -2.428   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.864  -1.658   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.864  -0.118   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.530   0.652   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.197  -0.118   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.863   0.652   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.863   2.192   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      -0.471   2.962   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      -1.805   2.192   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -3.138   2.962   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -4.472   2.192   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      -5.806   2.962   0.000  0.00  0.00           O+0
HETATM   19  O   UNK     0       6.198  -2.428   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       6.198  -3.968   0.000  0.00  0.00           C+0
CONECT    1    2   17                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4   15                                                  
CONECT    4    3    5   12                                                  
CONECT    5    4                                                            
CONECT    6    7   11                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   19                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11    6   10   12                                                  
CONECT   12    4   11   13                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15    3   14   16                                                  
CONECT   16   15   17                                                       
CONECT   17    1   16   18                                                  
CONECT   18   17                                                            
CONECT   19    8   20                                                       
CONECT   20   19                                                            
MASTER        0    0    0    0    0    0    0    0   20    0   44    0
END

View in JSmol

Synonyms

Value	Source
7-Hydroxy-4'-methoxyisoflavanone	HMDB

Chemical Formula

C₁₆H₁₄O₄

Average Mass

270.2800 Da

Monoisotopic Mass

270.08921 Da

IUPAC Name

7-hydroxy-3-(4-methoxyphenyl)-3,4-dihydro-2H-1-benzopyran-4-one

Traditional Name

dihydroformononetin

CAS Registry Number

Not Available

SMILES

COC1=CC=C(C=C1)C1COC2=C(C=CC(O)=C2)C1=O

InChI Identifier

InChI=1S/C16H14O4/c1-19-12-5-2-10(3-6-12)14-9-20-15-8-11(17)4-7-13(15)16(14)18/h2-8,14,17H,9H2,1H3

InChI Key

INYISIYHXQDCPK-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Eysenhardtia polystachya	LOTUS Database	35616633
Styphnolobium japonicum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 4'-o-methylated isoflavonoids. These are isoflavonoids with methoxy groups attached to the C4' atom of the isoflavonoid backbone. Isoflavonoids are natural products derived from 3-phenylchromen-4-one.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

O-methylated isoflavonoids

Direct Parent

4'-O-methylated isoflavonoids

Alternative Parents

Substituents

4p-methoxyisoflavonoid
Hydroxyisoflavonoid
Isoflavanol
Isoflavanone
Isoflavan
Chromone
Chromane
Benzopyran
1-benzopyran
Phenoxy compound
Anisole
Methoxybenzene
Phenol ether
Aryl ketone
Aryl alkyl ketone
Alkyl aryl ether
1-hydroxy-2-unsubstituted benzenoid
Benzenoid
Monocyclic benzene moiety
Ketone
Oxacycle
Ether
Organoheterocyclic compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Isoflavonoids (LMPK12050448 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.01	ALOGPS
logP	2.53	ChemAxon
logS	-3.5	ALOGPS
pKa (Strongest Acidic)	7.78	ChemAxon
pKa (Strongest Basic)	-4.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	55.76 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	74.18 m³·mol⁻¹	ChemAxon
Polarizability	27.79 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0033759

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB011895

KNApSAcK ID

C00009534

Chemspider ID

10211379

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

14730796

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for dihydroformononetin (NP0243365)

MOL for NP0243365 (dihydroformononetin)

3D MOL for NP0243365 (dihydroformononetin)

3D SDF for NP0243365 (dihydroformononetin)

3D-SDF for NP0243365 (dihydroformononetin)

PDB for NP0243365 (dihydroformononetin)

3D PDB for NP0243365 (dihydroformononetin)

SMILES for NP0243365 (dihydroformononetin)

INCHI for NP0243365 (dihydroformononetin)

Structure for NP0243365 (dihydroformononetin)

3D Structure for NP0243365 (dihydroformononetin)