Np mrd loader

Record Information
Version2.0
Created at2022-09-07 02:07:58 UTC
Updated at2022-09-07 02:07:58 UTC
NP-MRD IDNP0241939
Secondary Accession NumbersNone
Natural Product Identification
Common Name(2r)-2-{[(2r,3r,4r,5r)-2-amino-4,5-dihydroxy-1-oxo-6-(phosphonooxy)hexan-3-yl]oxy}propanoic acid
DescriptionMuramic acid 6-phosphate belongs to the class of organic compounds known as monosaccharide phosphates. These are monosaccharides comprising a phosphated group linked to the carbohydrate unit. (2r)-2-{[(2r,3r,4r,5r)-2-amino-4,5-dihydroxy-1-oxo-6-(phosphonooxy)hexan-3-yl]oxy}propanoic acid was first documented in 1983 (PMID: 6874676). Based on a literature review a significant number of articles have been published on Muramic acid 6-phosphate (PMID: 1627160) (PMID: 2914854) (PMID: 2986963) (PMID: 3918862) (PMID: 6427197).
Structure
Thumb
Synonyms
ValueSource
Muramate 6-phosphateGenerator
Muramic acid 6-phosphoric acidGenerator
Chemical FormulaC9H18NO10P
Average Mass331.2140 Da
Monoisotopic Mass331.06683 Da
IUPAC Name(2R)-2-{[(2R,3R,4R,5R)-2-amino-4,5-dihydroxy-1-oxo-6-(phosphonooxy)hexan-3-yl]oxy}propanoic acid
Traditional Name(2R)-2-{[(2R,3R,4R,5R)-2-amino-4,5-dihydroxy-1-oxo-6-(phosphonooxy)hexan-3-yl]oxy}propanoic acid
CAS Registry NumberNot Available
SMILES
C[C@@H](O[C@H]([C@@H](N)C=O)[C@H](O)[C@H](O)COP(O)(O)=O)C(O)=O
InChI Identifier
InChI=1S/C9H18NO10P/c1-4(9(14)15)20-8(5(10)2-11)7(13)6(12)3-19-21(16,17)18/h2,4-8,12-13H,3,10H2,1H3,(H,14,15)(H2,16,17,18)/t4-,5+,6-,7-,8-/m1/s1
InChI KeyADPNCGPHHZFMFA-OZRXBMAMSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
Description Belongs to the class of organic compounds known as monosaccharide phosphates. These are monosaccharides comprising a phosphated group linked to the carbohydrate unit.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentMonosaccharide phosphates
Alternative Parents
Substituents
  • Hexose monosaccharide
  • Monosaccharide phosphate
  • Monoalkyl phosphate
  • Amino saccharide
  • Alkyl phosphate
  • Phosphoric acid ester
  • Organic phosphoric acid derivative
  • 1,3-aminoalcohol
  • 1,2-diol
  • Amino acid
  • Amino acid or derivatives
  • Secondary alcohol
  • Carboxylic acid derivative
  • Carboxylic acid
  • Dialkyl ether
  • Ether
  • Monocarboxylic acid or derivatives
  • Alcohol
  • Organic oxide
  • Organic nitrogen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Amine
  • Aldehyde
  • Primary amine
  • Primary aliphatic amine
  • Organonitrogen compound
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-4.3ChemAxon
pKa (Strongest Acidic)1.48ChemAxon
pKa (Strongest Basic)7ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area196.84 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity65.21 m³·mol⁻¹ChemAxon
Polarizability27.86 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78443552
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101835388
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Siddiqui M, Qureshi MH, Malghani MA, Walker-Nasir E, Fayyaz-ud-Din, Nasir-ud-Din: Structure of a Micrococcus lysodeikticus cell wall fragment containing phosphorylated sugars. Biochem Int. 1992 Mar;26(3):509-19. [PubMed:1627160 ]
  2. Jurgens UJ, Burger-Wiersma T: Peptidoglycan-polysaccharide complex in the cell wall of the filamentous prochlorophyte Prochlorothrix hollandica. J Bacteriol. 1989 Jan;171(1):498-502. doi: 10.1128/jb.171.1.498-502.1989. [PubMed:2914854 ]
  3. Kojima N, Araki Y, Ito E: Structural studies on the acidic polysaccharide of Bacillus cereus AHU 1356 cell walls. Eur J Biochem. 1985 May 2;148(3):479-84. doi: 10.1111/j.1432-1033.1985.tb08864.x. [PubMed:2986963 ]
  4. Kaya S, Araki Y, Ito E: Characterization of a novel linkage unit between ribitol teichoic acid and peptidoglycan in Listeria monocytogenes cell walls. Eur J Biochem. 1985 Feb 1;146(3):517-22. doi: 10.1111/j.1432-1033.1985.tb08682.x. [PubMed:3918862 ]
  5. Kaya S, Yokoyama K, Araki Y, Ito E: N-acetylmannosaminyl(1----4)N-acetylglucosamine, a linkage unit between glycerol teichoic acid and peptidoglycan in cell walls of several Bacillus strains. J Bacteriol. 1984 Jun;158(3):990-6. doi: 10.1128/jb.158.3.990-996.1984. [PubMed:6427197 ]
  6. Kojima N, Araki Y, Ito E: Structure of linkage region between ribitol teichoic acid and peptidoglycan in cell walls of Staphylococcus aureus H. J Biol Chem. 1983 Aug 10;258(15):9043-5. [PubMed:6874676 ]
  7. LOTUS database [Link]