| Record Information |
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| Version | 2.0 |
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| Created at | 2022-09-07 01:08:32 UTC |
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| Updated at | 2022-09-07 01:08:32 UTC |
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| NP-MRD ID | NP0241145 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | (5z)-5-[(3,7-dimethyl-4,5,6,7-tetrahydro-2h-isoindol-1-yl)methylidene]-4-methoxy-1'h-2,2'-bipyrrole |
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| Description | Cycloprodigiosin, also known as CPRG-HCL, belongs to the class of organic compounds known as dipyrrins. Dipyrrins are compounds containing two pyrrole rings fused via a methine (-C=) group. (5z)-5-[(3,7-dimethyl-4,5,6,7-tetrahydro-2h-isoindol-1-yl)methylidene]-4-methoxy-1'h-2,2'-bipyrrole is found in Pseudoalteromonas denitrificans and Vibrio gazogenes. (5z)-5-[(3,7-dimethyl-4,5,6,7-tetrahydro-2h-isoindol-1-yl)methylidene]-4-methoxy-1'h-2,2'-bipyrrole was first documented in 2015 (PMID: 26409875). Based on a literature review a small amount of articles have been published on Cycloprodigiosin (PMID: 32275146) (PMID: 32175509) (PMID: 28892091) (PMID: 26970053). |
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| Structure | COC1=CC(=N\C1=C/C1=C2C(C)CCCC2=C(C)N1)C1=CC=CN1 InChI=1S/C20H23N3O/c1-12-6-4-7-14-13(2)22-18(20(12)14)10-17-19(24-3)11-16(23-17)15-8-5-9-21-15/h5,8-12,21-22H,4,6-7H2,1-3H3/b17-10- |
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| Synonyms | | Value | Source |
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| CPRG-HCL | MeSH | | Cycloprodigiosin hydrochloride | MeSH |
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| Chemical Formula | C20H23N3O |
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| Average Mass | 321.4240 Da |
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| Monoisotopic Mass | 321.18411 Da |
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| IUPAC Name | Not Available |
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| Traditional Name | Not Available |
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| CAS Registry Number | Not Available |
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| SMILES | COC1=CC(=N\C1=C/C1=C2C(C)CCCC2=C(C)N1)C1=CC=CN1 |
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| InChI Identifier | InChI=1S/C20H23N3O/c1-12-6-4-7-14-13(2)22-18(20(12)14)10-17-19(24-3)11-16(23-17)15-8-5-9-21-15/h5,8-12,21-22H,4,6-7H2,1-3H3/b17-10- |
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| InChI Key | DSHIIBUGOWQFSO-YVLHZVERSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as dipyrrins. Dipyrrins are compounds containing two pyrrole rings fused via a methine (-C=) group. |
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| Kingdom | Organic compounds |
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| Super Class | Organoheterocyclic compounds |
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| Class | Pyrroles |
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| Sub Class | Substituted pyrroles |
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| Direct Parent | Dipyrrins |
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| Alternative Parents | |
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| Substituents | - Dipyrrin
- Isoindole
- Isoindole or derivatives
- Heteroaromatic compound
- Ketimine
- Propargyl-type 1,3-dipolar organic compound
- Organic 1,3-dipolar compound
- Azacycle
- Organooxygen compound
- Organonitrogen compound
- Hydrocarbon derivative
- Organopnictogen compound
- Organic oxygen compound
- Organic nitrogen compound
- Imine
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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| General References | - Vitale GA, Sciarretta M, Palma Esposito F, January GG, Giaccio M, Bunk B, Sproer C, Bajerski F, Power D, Festa C, Monti MC, D'Auria MV, de Pascale D: Genomics-Metabolomics Profiling Disclosed Marine Vibrio spartinae 3.6 as a Producer of a New Branched Side Chain Prodigiosin. J Nat Prod. 2020 May 22;83(5):1495-1504. doi: 10.1021/acs.jnatprod.9b01159. Epub 2020 Apr 10. [PubMed:32275146 ]
- Setiyono E, Adhiwibawa MAS, Indrawati R, Prihastyanti MNU, Shioi Y, Brotosudarmo THP: An Indonesian Marine Bacterium, Pseudoalteromonas rubra, Produces Antimicrobial Prodiginine Pigments. ACS Omega. 2020 Feb 26;5(9):4626-4635. doi: 10.1021/acsomega.9b04322. eCollection 2020 Mar 10. [PubMed:32175509 ]
- de Rond T, Stow P, Eigl I, Johnson RE, Chan LJG, Goyal G, Baidoo EEK, Hillson NJ, Petzold CJ, Sarpong R, Keasling JD: Oxidative cyclization of prodigiosin by an alkylglycerol monooxygenase-like enzyme. Nat Chem Biol. 2017 Nov;13(11):1155-1157. doi: 10.1038/nchembio.2471. Epub 2017 Sep 11. [PubMed:28892091 ]
- Li B, Wang P, Zeng Z, Cai X, Wang G, Wang X: Complete genome sequence of Pseudoalteromonas rubra SCSIO 6842, harboring a putative conjugative plasmid pMBL6842. J Biotechnol. 2016 Apr 20;224:66-7. doi: 10.1016/j.jbiotec.2016.03.010. Epub 2016 Mar 9. [PubMed:26970053 ]
- Ramaprasad EVV, Bharti D, Sasikala C, Ramana CV: Zooshikella marina sp. nov. a cycloprodigiosin- and prodigiosin-producing marine bacterium isolated from beach sand. Int J Syst Evol Microbiol. 2015 Dec;65(12):4669-4673. doi: 10.1099/ijsem.0.000630. Epub 2015 Sep 24. [PubMed:26409875 ]
- LOTUS database [Link]
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