NP-MRD: Showing NP-Card for (1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione (NP0241018)

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Record Information

Version

2.0

Created at

2022-09-07 00:58:52 UTC

Updated at

2022-09-07 00:58:52 UTC

NP-MRD ID

NP0241018

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione

Description

(1R,4R,7S,9R)-9-(1H-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]Hexadeca-10,12,14-triene-3,6-dione belongs to the class of organic compounds known as pyrroloindoles. Pyrroloindoles are compounds containing a pyrroloindole moiety, which is a tricyclic heterocycle which consists of a pyrrole ring fused to an indole. Pyrrole is 5-membered ring consisting of four carbon atoms and one nitrogen atom. Indole is a bicyclic compound consisting of a six-membered benzene ring fused to a five-membered nitrogen-containing pyrrole ring. (1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione is found in Clonostachys rosea. Based on a literature review very few articles have been published on (1R,4R,7S,9R)-9-(1H-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]Hexadeca-10,12,14-triene-3,6-dione.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309072202582D          

 32 37  0  0  1  0            999 V2000
    1.4890   -1.0711    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2683   -0.8004    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    2.8924   -1.3400    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6717   -1.0693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8270   -0.2591    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2958   -1.6089    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.1144   -1.5062    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.7162   -0.9420    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.4389   -1.3400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2182   -1.0693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8423   -1.6089    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6870   -2.4192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9077   -2.6899    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2836   -2.1503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4650   -2.2530    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.5677   -3.0716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9659   -3.6358    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3165   -4.3826    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.1351   -4.2799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7592   -4.8195    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5385   -4.5488    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6938   -3.7385    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0697   -3.1989    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2904   -3.4696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8631   -2.8172    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1405   -2.4192    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0708   -3.2412    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.5691   -3.8988    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3612   -2.6899    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2059   -3.5001    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7371   -2.1503    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9578   -2.4209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  3  2  1  6  0  0  0
  3  4  1  0  0  0  0
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  4  6  1  0  0  0  0
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 29 30  2  0  0  0  0
 29 31  1  0  0  0  0
  3 31  1  0  0  0  0
 31 32  1  0  0  0  0
M  END

     RDKit          3D

 56 61  0  0  0  0  0  0  0  0999 V2000
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    2.7659   -2.0329    1.3350 S   0  0  0  0  0  0  0  0  0  0  0  0
    3.1787   -0.3829    0.6439 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3049    0.6462    1.2184 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.5056    2.6613   -0.1172 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6463    1.5790   -0.0373 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2768    1.6764    0.1420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1351    0.7526    0.2455 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3807   -0.5857    0.7668 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8480   -1.0867    1.9697 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3245   -2.3056    2.1153 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1256   -2.6486    1.1081 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8313   -3.8142    0.8231 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5816   -3.9064   -0.3228 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6498   -2.8454   -1.2127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9429   -1.7216   -0.8935 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1674   -1.5646    0.2475 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4245    0.6601   -1.1330 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0183    0.9046   -0.8660 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5888    2.4555   -1.6751 S   0  0  0  0  0  0  0  0  0  0  0  0
    3.2824    2.7493   -1.0591 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8963   -0.1475   -1.4249 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.5557    4.8101   -0.0625 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5755    2.5212   -0.2593 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1348    0.6190   -0.1150 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1790   -0.5410    2.6194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0940   -2.9307    2.9354 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7468   -4.6163    1.5490 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1098   -4.8359   -0.4944 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2502   -2.9555   -2.1032 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9731   -0.8772   -1.5682 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8750    1.4085   -1.8192 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.4869    3.8252   -1.2101 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0152    2.1562   -1.6133 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3320    2.5806    0.0498 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309072202582D          

 32 37  0  0  1  0            999 V2000
    1.4890   -1.0711    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2683   -0.8004    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    2.8924   -1.3400    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6717   -1.0693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8270   -0.2591    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2958   -1.6089    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.1144   -1.5062    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.7162   -0.9420    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.4389   -1.3400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2182   -1.0693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8423   -1.6089    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6870   -2.4192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9077   -2.6899    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2836   -2.1503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4650   -2.2530    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.5677   -3.0716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9659   -3.6358    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3165   -4.3826    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
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    3.2059   -3.5001    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
> <DATABASE_ID>
NP0241018

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CS[C@H]1N(C)C(=O)[C@]2(C[C@]3([C@H](NC4=CC=CC=C34)N2C1=O)C1=CNC2=CC=CC=C12)SC

> <INCHI_IDENTIFIER>
InChI=1S/C24H24N4O2S2/c1-27-20(31-2)19(29)28-21-23(13-24(28,32-3)22(27)30,15-9-5-7-11-18(15)26-21)16-12-25-17-10-6-4-8-14(16)17/h4-12,20-21,25-26H,13H2,1-3H3/t20-,21-,23-,24+/m1/s1

> <INCHI_KEY>
LIFASPWDCJIPIM-KOVSNXQUSA-N

> <FORMULA>
C24H24N4O2S2

> <MOLECULAR_WEIGHT>
464.6

> <EXACT_MASS>
464.134068377

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
48.26805876597636

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,4R,7S,9R)-9-(1H-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0^{2,7}.0^{10,15}]hexadeca-10,12,14-triene-3,6-dione

> <JCHEM_LOGP>
3.897723653000001

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.598207536846981

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.792251538042883

> <JCHEM_PKA_STRONGEST_BASIC>
1.7030017931518815

> <JCHEM_POLAR_SURFACE_AREA>
68.44

> <JCHEM_REFRACTIVITY>
140.69690000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1R,4R,7S,9R)-9-(1H-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0^{2,7}.0^{10,15}]hexadeca-10,12,14-triene-3,6-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 07-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   07-SEP-22         0                                  
HETATM    1  C   UNK     0       2.779  -1.999   0.000  0.00  0.00           C+0
HETATM    2  S   UNK     0       4.234  -1.494   0.000  0.00  0.00           S+0
HETATM    3  C   UNK     0       5.399  -2.501   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.854  -1.996   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       7.144  -0.484   0.000  0.00  0.00           O+0
HETATM    6  N   UNK     0       8.019  -3.003   0.000  0.00  0.00           N+0
HETATM    7  C   UNK     0       9.547  -2.812   0.000  0.00  0.00           C+0
HETATM    8  N   UNK     0      10.670  -1.758   0.000  0.00  0.00           N+0
HETATM    9  C   UNK     0      12.019  -2.501   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      13.474  -1.996   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      14.639  -3.003   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      14.349  -4.516   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      12.894  -5.021   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      11.729  -4.014   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.201  -4.206   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.393  -5.734   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       9.270  -6.787   0.000  0.00  0.00           C+0
HETATM   18  N   UNK     0       9.924  -8.181   0.000  0.00  0.00           N+0
HETATM   19  C   UNK     0      11.452  -7.989   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      12.617  -8.996   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      14.072  -8.491   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      14.362  -6.979   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      13.197  -5.971   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      11.742  -6.477   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       9.078  -5.259   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       7.729  -4.516   0.000  0.00  0.00           C+0
HETATM   27  S   UNK     0       7.599  -6.050   0.000  0.00  0.00           S+0
HETATM   28  C   UNK     0       8.529  -7.278   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       6.274  -5.021   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       5.984  -6.534   0.000  0.00  0.00           O+0
HETATM   31  N   UNK     0       5.109  -4.014   0.000  0.00  0.00           N+0
HETATM   32  C   UNK     0       3.655  -4.519   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   31                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   26                                                  
CONECT    7    6    8   15                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   14                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13    9   15                                                  
CONECT   15   14    7   16   25                                             
CONECT   16   15   17   24                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   24                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   16   19                                                  
CONECT   25   15   26                                                       
CONECT   26   25    6   27   29                                             
CONECT   27   26   28                                                       
CONECT   28   27                                                            
CONECT   29   26   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29    3   32                                                  
CONECT   32   31                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   74    0
END

View in JSmol

Synonyms

Value	Source
(1R,4R,7S,9R)-9-(1H-indol-3-yl)-5-Methyl-4,7-bis(methylsulphanyl)-2,5,16-triazatetracyclo[7.7.0.0,.0,]hexadeca-10,12,14-triene-3,6-dione	Generator

Chemical Formula

C₂₄H₂₄N₄O₂S₂

Average Mass

464.6000 Da

Monoisotopic Mass

464.13407 Da

IUPAC Name

(1R,4R,7S,9R)-9-(1H-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0^{2,7}.0^{10,15}]hexadeca-10,12,14-triene-3,6-dione

Traditional Name

(1R,4R,7S,9R)-9-(1H-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0^{2,7}.0^{10,15}]hexadeca-10,12,14-triene-3,6-dione

CAS Registry Number

Not Available

SMILES

CS[C@H]1N(C)C(=O)[C@]2(C[C@]3([C@H](NC4=CC=CC=C34)N2C1=O)C1=CNC2=CC=CC=C12)SC

InChI Identifier

InChI=1S/C24H24N4O2S2/c1-27-20(31-2)19(29)28-21-23(13-24(28,32-3)22(27)30,15-9-5-7-11-18(15)26-21)16-12-25-17-10-6-4-8-14(16)17/h4-12,20-21,25-26H,13H2,1-3H3/t20-,21-,23-,24+/m1/s1

InChI Key

LIFASPWDCJIPIM-KOVSNXQUSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Clonostachys rosea	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as pyrroloindoles. Pyrroloindoles are compounds containing a pyrroloindole moiety, which is a tricyclic heterocycle which consists of a pyrrole ring fused to an indole. Pyrrole is 5-membered ring consisting of four carbon atoms and one nitrogen atom. Indole is a bicyclic compound consisting of a six-membered benzene ring fused to a five-membered nitrogen-containing pyrrole ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Pyrroloindoles

Direct Parent

Pyrroloindoles

Alternative Parents

Substituents

Pyrroloindole
Alpha-amino acid or derivatives
3-alkylindole
Indole
Dihydroindole
Thiodioxopiperazine
Dioxopiperazine
2,5-dioxopiperazine
Secondary aliphatic/aromatic amine
N-methylpiperazine
N-alkylpiperazine
1,4-diazinane
Piperazine
Substituted pyrrole
Benzenoid
Tertiary carboxylic acid amide
Heteroaromatic compound
Pyrrolidine
Pyrrole
Amino acid or derivatives
Carboxamide group
Lactam
Thioether
Azacycle
Secondary amine
Dialkylthioether
Sulfenyl compound
Hemithioaminal
Carboxylic acid derivative
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organic oxygen compound
Organic nitrogen compound
Organonitrogen compound
Organooxygen compound
Carbonyl group
Organosulfur compound
Amine
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.9	ChemAxon
pKa (Strongest Acidic)	14.79	ChemAxon
pKa (Strongest Basic)	1.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	68.44 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	140.7 m³·mol⁻¹	ChemAxon
Polarizability	48.27 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163193344

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione (NP0241018)

MOL for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

3D MOL for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

3D SDF for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

3D-SDF for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

PDB for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

3D PDB for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

SMILES for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

INCHI for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

Structure for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)

3D Structure for NP0241018 ((1r,4r,7s,9s)-9-(1h-indol-3-yl)-5-methyl-4,7-bis(methylsulfanyl)-2,5,16-triazatetracyclo[7.7.0.0²,⁷.0¹⁰,¹⁵]hexadeca-10,12,14-triene-3,6-dione)