NP-MRD: Showing NP-Card for (1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione (NP0240657)

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Record Information

Version

2.0

Created at

2022-09-07 00:32:16 UTC

Updated at

2022-09-07 00:32:17 UTC

NP-MRD ID

NP0240657

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione

Description

(1S,2R,4Z,6S,7R,14R,16R)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]Octadeca-4,11(18)-diene-10,12-dione belongs to the class of organic compounds known as oxanes. Oxanes are compounds containing an oxane (tetrahydropyran) ring, which is a six-member saturated aliphatic heterocycle with one oxygen atom and five carbon atoms. Based on a literature review very few articles have been published on (1S,2R,4Z,6S,7R,14R,16R)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]Octadeca-4,11(18)-diene-10,12-dione.

Structure

MOL 3D MOL SDF PDB SMILES InChI

Abyssomicin I
  Mrv1652301052120042D          

 25 28  0  0  0  0            999 V2000
    2.4150   -3.0065    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8304   -2.4244    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1072   -2.8214    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2841   -2.7644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3774   -2.2715    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0368   -2.7673    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6674   -1.4991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4125   -0.7145    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4400    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2200    0.3810    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.4125    0.7145    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8250    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0275    0.0476    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6676   -0.2173    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1634   -0.8767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2242   -1.6995    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0307   -1.8730    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9090    1.3734    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8250    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7349    1.4739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6674   -1.4991    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.9840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1997   -2.7845    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 14 20  1  1  0  0  0
 12 21  1  6  0  0  0
 11 22  1  6  0  0  0
  9 23  1  6  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 18  2  1  0  0  0  0
 24  7  1  0  0  0  0
 13  8  1  0  0  0  0
 15  9  1  0  0  0  0
M  END

     RDKit          2D

 49 52  0  0  0  0  0  0  0  0999 V2000
    4.4231   -2.4336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7265   -1.1052    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6990   -2.1980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2437   -2.5618    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1772   -2.0811    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0387   -3.3090    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0323   -0.7500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0323    0.7500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1470    1.7537    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8351    3.2209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9499    4.2246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4086    3.6844    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7735    4.6079    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7062    2.6807    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3943    1.2135    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2760    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3943   -1.2135    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8168   -1.8895    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7062    2.6807    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2049    2.6198    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4328    1.7583    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0000    0.3697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3043   -0.3712    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4086    3.6844    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1128    5.0089    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7515   -1.7369    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895   -3.2869    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1197   -3.7620    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2198   -1.2469    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8786   -3.1245    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5668   -3.6921    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9043   -3.9085    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3248   -3.7473    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9535    3.1099    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5871    5.6801    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0646    5.2283    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5912    5.1733    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1500    5.7900    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9555    3.6845    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9555    5.5314    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6502    3.8464    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1916    2.4721    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0656    3.3147    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6856    4.0407    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6054    2.6938    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1268    1.3599    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5981    0.3878    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9618    4.2945    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5943    5.2436    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
 13 12  1  0
 12 14  1  0
 14 15  1  0
 15 16  1  1
 16 17  1  0
 17 18  2  0
 17  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  1  1
 10 24  1  0
 24 25  1  0
 24 19  1  0
 19 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  1  0
 22  2  1  0
  2  1  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  2  0
 10 12  1  0
  8 15  1  0
 19 15  1  0
  5  7  1  0
 13 38  1  0
 13 39  1  0
 13 40  1  0
 12 37  1  1
 14 41  1  0
 14 42  1  0
 11 34  1  0
 11 35  1  0
 11 36  1  0
 24 48  1  1
 25 49  1  0
 19 43  1  0
 20 44  1  0
 21 45  1  0
 22 46  1  6
 23 47  1  0
  2 29  1  1
  1 26  1  0
  1 27  1  0
  1 28  1  0
  3 30  1  0
  3 31  1  0
  4 32  1  0
  4 33  1  0
M  END

Abyssomicin I
  Mrv1652301052120042D          

 25 28  0  0  0  0            999 V2000
    2.4150   -3.0065    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8304   -2.4244    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1072   -2.8214    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2841   -2.7644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3774   -2.2715    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0368   -2.7673    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6674   -1.4991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4125   -0.7145    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4400    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2200    0.3810    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.4125    0.7145    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8250    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0275    0.0476    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6676   -0.2173    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1634   -0.8767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2242   -1.6995    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0307   -1.8730    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9090    1.3734    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8250    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7349    1.4739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6674   -1.4991    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.9840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1997   -2.7845    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 14 20  1  1  0  0  0
 12 21  1  6  0  0  0
 11 22  1  6  0  0  0
  9 23  1  6  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 18  2  1  0  0  0  0
 24  7  1  0  0  0  0
 13  8  1  0  0  0  0
 15  9  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0240657

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H]1C[C@]23OC(=O)C4=C2O[C@]1(C)[C@H](O)C3\C=C/[C@@H](O)[C@H](C)CCC4=O

> <INCHI_IDENTIFIER>
InChI=1S/C19H24O6/c1-9-4-6-13(21)14-16-19(25-17(14)23)8-10(2)18(3,24-16)15(22)11(19)5-7-12(9)20/h5,7,9-12,15,20,22H,4,6,8H2,1-3H3/b7-5-/t9-,10-,11?,12-,15-,18+,19-/m1/s1

> <INCHI_KEY>
CDXKGPDOCVNEGD-GWENLRFMSA-N

> <FORMULA>
C19H24O6

> <MOLECULAR_WEIGHT>
348.395

> <EXACT_MASS>
348.157288493

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
49

> <JCHEM_AVERAGE_POLARIZABILITY>
21.542597498216075

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2R,4Z,6S,7R,14R,16R)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0^{3,14}.0^{14,18}]octadeca-4,11(18)-diene-10,12-dione

> <ALOGPS_LOGP>
0.87

> <JCHEM_LOGP>
1.0702939599999992

> <ALOGPS_LOGS>
-2.25

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
18.341415202832273

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.60099374333404

> <JCHEM_PKA_STRONGEST_BASIC>
-1.3371593025293382

> <JCHEM_POLAR_SURFACE_AREA>
93.06

> <JCHEM_REFRACTIVITY>
90.4038

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.94e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,4Z,6S,7R,14R,16R)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0^{3,14}.0^{14,18}]octadeca-4,11(18)-diene-10,12-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-JAN-21   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: Abyssomicin I                                     
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-JAN-21         0                                  
HETATM    1  C   UNK     0       4.508  -5.612   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.417  -4.526   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.067  -5.267   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.530  -5.160   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.705  -4.240   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -1.935  -5.166   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0      -1.246  -2.798   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.770  -1.334   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.770  -1.334   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.821   0.000   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.411   0.711   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.770   1.334   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      -1.540   0.000   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       0.051   0.089   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.540   0.000   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.113  -0.406   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.038  -1.637   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       4.152  -3.172   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       5.657  -3.496   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0       1.697   2.564   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      -1.540   2.667   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       1.372   2.751   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       1.246  -2.798   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       0.000  -3.704   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       0.373  -5.198   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   18                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8   24                                                  
CONECT    8    7    9   13                                                  
CONECT    9    8   10   23   15                                             
CONECT   10    9   11                                                       
CONECT   11   10   12   22                                                  
CONECT   12   11   13   14   21                                             
CONECT   13   12    8                                                       
CONECT   14   12   15   20                                                  
CONECT   15   14   16    9                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19    2                                                  
CONECT   19   18                                                            
CONECT   20   14                                                            
CONECT   21   12                                                            
CONECT   22   11                                                            
CONECT   23    9   24                                                       
CONECT   24   23   25    7                                                  
CONECT   25   24                                                            
MASTER        0    0    0    0    0    0    0    0   25    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₉H₂₄O₆

Average Mass

348.3950 Da

Monoisotopic Mass

348.15729 Da

IUPAC Name

(1S,2R,4Z,6S,7R,14R,16R)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0^{3,14}.0^{14,18}]octadeca-4,11(18)-diene-10,12-dione

Traditional Name

(1S,2R,4Z,6S,7R,14R,16R)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0^{3,14}.0^{14,18}]octadeca-4,11(18)-diene-10,12-dione

CAS Registry Number

Not Available

SMILES

C[C@@H]1C[C@]23OC(=O)C4=C2O[C@]1(C)[C@H](O)C3\C=C/[C@@H](O)[C@H](C)CCC4=O

InChI Identifier

InChI=1S/C19H24O6/c1-9-4-6-13(21)14-16-19(25-17(14)23)8-10(2)18(3,24-16)15(22)11(19)5-7-12(9)20/h5,7,9-12,15,20,22H,4,6,8H2,1-3H3/b7-5-/t9-,10-,11?,12-,15-,18+,19-/m1/s1

InChI Key

CDXKGPDOCVNEGD-GWENLRFMSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as oxanes. Oxanes are compounds containing an oxane (tetrahydropyran) ring, which is a six-member saturated aliphatic heterocycle with one oxygen atom and five carbon atoms.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Oxanes

Sub Class

Not Available

Direct Parent

Oxanes

Alternative Parents

Substituents

Oxane
2-furanone
Vinylogous ester
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Dihydrofuran
Cyclic alcohol
Secondary alcohol
Lactone
Ketone
Carboxylic acid ester
Oxacycle
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.87	ALOGPS
logP	1.07	ChemAxon
logS	-2.2	ALOGPS
pKa (Strongest Acidic)	13.6	ChemAxon
pKa (Strongest Basic)	-1.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	93.06 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	90.4 m³·mol⁻¹	ChemAxon
Polarizability	21.54 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione (NP0240657)

MOL for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

3D MOL for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

3D SDF for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

3D-SDF for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

PDB for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

3D PDB for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

SMILES for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

INCHI for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

Structure for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)

3D Structure for NP0240657 ((1s,2r,4e,6s,7r,14r,16r)-2,6-dihydroxy-1,7,16-trimethyl-13,17-dioxatetracyclo[9.5.2.0³,¹⁴.0¹⁴,¹⁸]octadeca-4,11(18)-diene-10,12-dione)