Np mrd loader

Record Information
Version2.0
Created at2022-09-06 22:45:30 UTC
Updated at2022-09-06 22:45:30 UTC
NP-MRD IDNP0239215
Secondary Accession NumbersNone
Natural Product Identification
Common Name6-{[3,4-dihydroxy-6-(hydroxymethyl)-5-({3-methyl-8-oxo-1h,3h,4h,5h,6h-pyrano[3,4-c]pyran-1-yl}oxy)oxan-2-yl]oxy}-5-ethenyl-4a-hydroxy-3h,4h,5h,6h-pyrano[3,4-c]pyran-1-one
Description6-{[3,4-Dihydroxy-6-(hydroxymethyl)-5-({3-methyl-8-oxo-1H,3H,4H,5H,6H,8H-pyrano[3,4-c]pyran-1-yl}oxy)oxan-2-yl]oxy}-5-ethenyl-4a-hydroxy-1H,3H,4H,4aH,5H,6H-pyrano[3,4-c]pyran-1-one belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. 6-{[3,4-dihydroxy-6-(hydroxymethyl)-5-({3-methyl-8-oxo-1h,3h,4h,5h,6h-pyrano[3,4-c]pyran-1-yl}oxy)oxan-2-yl]oxy}-5-ethenyl-4a-hydroxy-3h,4h,5h,6h-pyrano[3,4-c]pyran-1-one is found in Swertia leducii. 6-{[3,4-Dihydroxy-6-(hydroxymethyl)-5-({3-methyl-8-oxo-1H,3H,4H,5H,6H,8H-pyrano[3,4-c]pyran-1-yl}oxy)oxan-2-yl]oxy}-5-ethenyl-4a-hydroxy-1H,3H,4H,4aH,5H,6H-pyrano[3,4-c]pyran-1-one is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC25H32O13
Average Mass540.5180 Da
Monoisotopic Mass540.18429 Da
IUPAC Name6-{[3,4-dihydroxy-6-(hydroxymethyl)-5-({3-methyl-8-oxo-1H,3H,4H,5H,6H,8H-pyrano[3,4-c]pyran-1-yl}oxy)oxan-2-yl]oxy}-5-ethenyl-4a-hydroxy-1H,3H,4H,4aH,5H,6H-pyrano[3,4-c]pyran-1-one
Traditional Name6-{[3,4-dihydroxy-6-(hydroxymethyl)-5-({3-methyl-8-oxo-1H,3H,4H,5H,6H-pyrano[3,4-c]pyran-1-yl}oxy)oxan-2-yl]oxy}-5-ethenyl-4a-hydroxy-3H,4H,5H,6H-pyrano[3,4-c]pyran-1-one
CAS Registry NumberNot Available
SMILES
CC1CC2=C(C(OC3C(CO)OC(OC4OC=C5C(=O)OCCC5(O)C4C=C)C(O)C3O)O1)C(=O)OCC2
InChI Identifier
InChI=1S/C25H32O13/c1-3-13-22(34-10-14-20(29)33-7-5-25(13,14)31)38-24-18(28)17(27)19(15(9-26)36-24)37-23-16-12(8-11(2)35-23)4-6-32-21(16)30/h3,10-11,13,15,17-19,22-24,26-28,31H,1,4-9H2,2H3
InChI KeyPHYGQKMPRRTNQO-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Swertia leduciiLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentO-glycosyl compounds
Alternative Parents
Substituents
  • Hexose monosaccharide
  • O-glycosyl compound
  • Delta valerolactone
  • Dihydropyranone
  • Delta_valerolactone
  • Pyran
  • Oxane
  • Monosaccharide
  • Dicarboxylic acid or derivatives
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tertiary alcohol
  • Vinylogous ester
  • Secondary alcohol
  • Lactone
  • Carboxylic acid ester
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Acetal
  • Primary alcohol
  • Alcohol
  • Organic oxide
  • Carbonyl group
  • Hydrocarbon derivative
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-0.65ALOGPS
logP-0.53ChemAxon
logS-2.1ALOGPS
pKa (Strongest Acidic)12.23ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count11ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area179.67 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity123.95 m³·mol⁻¹ChemAxon
Polarizability52.85 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]