| Record Information |
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| Version | 2.0 |
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| Created at | 2022-09-06 22:41:57 UTC |
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| Updated at | 2022-09-06 22:41:57 UTC |
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| NP-MRD ID | NP0239169 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | (3ar,6s,6ar,10s,12r,15r,15ar)-3-benzyl-1,6,12-trihydroxy-4,5,10,12-tetramethyl-11-oxo-3h,3ah,6h,6ah,9h,10h,15h-cycloundeca[d]isoindol-15-yl acetate |
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| Description | Cytochalasin C belongs to the class of organic compounds known as cytochalasans. These are fungal metabolites structurally characterized by the presence of an isoindolone nucleus fused to a macrocyclic ring, which can either a lactone, as in cytochalasin B, a carbonate, as in cytochalasin E, or a carbocycle, as in cytochalasin D, H, and K. (3ar,6s,6ar,10s,12r,15r,15ar)-3-benzyl-1,6,12-trihydroxy-4,5,10,12-tetramethyl-11-oxo-3h,3ah,6h,6ah,9h,10h,15h-cycloundeca[d]isoindol-15-yl acetate was first documented in 2019 (PMID: 31351910). Based on a literature review a small amount of articles have been published on Cytochalasin C (PMID: 33585752) (PMID: 33325741) (PMID: 33670169) (PMID: 33188275). |
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| Structure | C[C@H]1C\C=C/[C@H]2[C@H](O)C(C)=C(C)[C@H]3C(CC4=CC=CC=C4)N=C(O)[C@@]23[C@H](OC(C)=O)\C=C/[C@@](C)(O)C1=O InChI=1S/C30H37NO6/c1-17-10-9-13-22-26(33)19(3)18(2)25-23(16-21-11-7-6-8-12-21)31-28(35)30(22,25)24(37-20(4)32)14-15-29(5,36)27(17)34/h6-9,11-15,17,22-26,33,36H,10,16H2,1-5H3,(H,31,35)/b13-9-,15-14-/t17-,22-,23?,24+,25-,26+,29+,30+/m0/s1 |
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| Synonyms | Not Available |
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| Chemical Formula | C30H37NO6 |
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| Average Mass | 507.6270 Da |
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| Monoisotopic Mass | 507.26209 Da |
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| IUPAC Name | (6S,6aR,10S,12R,15R,15aR,15bR)-3-benzyl-1,6,12-trihydroxy-4,5,10,12-tetramethyl-11-oxo-3H,6H,6aH,9H,10H,11H,12H,15H,15bH-cycloundeca[e]isoindol-15-yl acetate |
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| Traditional Name | (6S,6aR,10S,12R,15R,15aR,15bR)-3-benzyl-1,6,12-trihydroxy-4,5,10,12-tetramethyl-11-oxo-3H,6H,6aH,9H,10H,15H,15bH-cycloundeca[e]isoindol-15-yl acetate |
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| CAS Registry Number | Not Available |
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| SMILES | C[C@H]1C\C=C/[C@H]2[C@H](O)C(C)=C(C)[C@H]3C(CC4=CC=CC=C4)N=C(O)[C@@]23[C@H](OC(C)=O)\C=C/[C@@](C)(O)C1=O |
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| InChI Identifier | InChI=1S/C30H37NO6/c1-17-10-9-13-22-26(33)19(3)18(2)25-23(16-21-11-7-6-8-12-21)31-28(35)30(22,25)24(37-20(4)32)14-15-29(5,36)27(17)34/h6-9,11-15,17,22-26,33,36H,10,16H2,1-5H3,(H,31,35)/b13-9-,15-14-/t17-,22-,23?,24+,25-,26+,29+,30+/m0/s1 |
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| InChI Key | NAIODHJWOHMDJX-NGFXLRBHSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | Not Available |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as cytochalasans. These are fungal metabolites structurally characterized by the presence of an isoindolone nucleus fused to a macrocyclic ring, which can either a lactone, as in cytochalasin B, a carbonate, as in cytochalasin E, or a carbocycle, as in cytochalasin D, H, and K. |
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| Kingdom | Organic compounds |
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| Super Class | Alkaloids and derivatives |
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| Class | Cytochalasans |
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| Sub Class | Not Available |
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| Direct Parent | Cytochalasans |
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| Alternative Parents | |
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| Substituents | - Cytochalasan
- Carbocyclic cytochalasan skeleton
- Isoindolone
- Isoindole or derivatives
- Isoindole
- Isoindoline
- Benzenoid
- 2-pyrrolidone
- Pyrrolidone
- Monocyclic benzene moiety
- Acyloin
- Tertiary alcohol
- Pyrrolidine
- Cyclic ketone
- Secondary carboxylic acid amide
- Secondary alcohol
- Lactam
- Ketone
- Carboxylic acid ester
- Carboxamide group
- Azacycle
- Organoheterocyclic compound
- Monocarboxylic acid or derivatives
- Carboxylic acid derivative
- Organic nitrogen compound
- Organic oxygen compound
- Organopnictogen compound
- Organic oxide
- Hydrocarbon derivative
- Organooxygen compound
- Organonitrogen compound
- Carbonyl group
- Alcohol
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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| General References | - Wang WX, Li ZH, He J, Feng T, Li J, Liu JK: Cytotoxic cytochalasans from fungus Xylaria longipes. Fitoterapia. 2019 Sep;137:104278. doi: 10.1016/j.fitote.2019.104278. Epub 2019 Jul 25. [PubMed:31351910 ]
- Kushwaha M, Qayum A, Jain SK, Singh J, Srivastava AK, Srivastava S, Sharma N, Abrol V, Malik R, Singh SK, Vishwakarma RA, Jaglan S: Tandem MS-Based Metabolite Profiling of 19,20-Epoxycytochalasin C Reveals the Importance of a Hydroxy Group at the C7 Position for Biological Activity. ACS Omega. 2021 Jan 25;6(5):3717-3726. doi: 10.1021/acsomega.0c05307. eCollection 2021 Feb 9. [PubMed:33585752 ]
- Zhang Q, Huang ZP, Zhao YY, Zhao Q, Chen JH, Ma WG, Zhang XM: Six 19,20-epoxycytochalasans from endophytic Diaporthe sp. RJ-47. Nat Prod Res. 2022 Jul;36(13):3375-3380. doi: 10.1080/14786419.2020.1859504. Epub 2020 Dec 16. [PubMed:33325741 ]
- Lambert C, Pourmoghaddam MJ, Cedeno-Sanchez M, Surup F, Khodaparast SA, Krisai-Greilhuber I, Voglmayr H, Stradal TEB, Stadler M: Resolution of the Hypoxylon fuscum Complex (Hypoxylaceae, Xylariales) and Discovery and Biological Characterization of Two of Its Prominent Secondary Metabolites. J Fungi (Basel). 2021 Feb 11;7(2):131. doi: 10.3390/jof7020131. [PubMed:33670169 ]
- Barthelemy M, Guerineau V, Genta-Jouve G, Roy M, Chave J, Guillot R, Pellissier L, Wolfender JL, Stien D, Eparvier V, Touboul D: Identification and dereplication of endophytic Colletotrichum strains by MALDI TOF mass spectrometry and molecular networking. Sci Rep. 2020 Nov 13;10(1):19788. doi: 10.1038/s41598-020-74852-w. [PubMed:33188275 ]
- LOTUS database [Link]
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