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Record Information
Version2.0
Created at2022-09-06 17:25:00 UTC
Updated at2022-09-06 17:25:00 UTC
NP-MRD IDNP0235021
Secondary Accession NumbersNone
Natural Product Identification
Common Name(3s,6s,12r,15s,18r,21z,24s,25s,26s)-18-[(2s)-butan-2-yl]-8,17,24-trihydroxy-6,15-diisopropyl-3,4,10,13,21,25-hexamethyl-12-(2-methylpropyl)-26-[(2z)-pent-2-en-2-yl]-1,19-dioxa-4,7,10,13,16-pentaazacyclohexacosa-7,16,21-triene-2,5,11,14,20-pentone
DescriptionAurilide belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating. (3s,6s,12r,15s,18r,21z,24s,25s,26s)-18-[(2s)-butan-2-yl]-8,17,24-trihydroxy-6,15-diisopropyl-3,4,10,13,21,25-hexamethyl-12-(2-methylpropyl)-26-[(2z)-pent-2-en-2-yl]-1,19-dioxa-4,7,10,13,16-pentaazacyclohexacosa-7,16,21-triene-2,5,11,14,20-pentone is found in Dolabella auricularia. (3s,6s,12r,15s,18r,21z,24s,25s,26s)-18-[(2s)-butan-2-yl]-8,17,24-trihydroxy-6,15-diisopropyl-3,4,10,13,21,25-hexamethyl-12-(2-methylpropyl)-26-[(2z)-pent-2-en-2-yl]-1,19-dioxa-4,7,10,13,16-pentaazacyclohexacosa-7,16,21-triene-2,5,11,14,20-pentone was first documented in 2011 (PMID: 21903231). Based on a literature review a small amount of articles have been published on aurilide (PMID: 28515454) (PMID: 22822361) (PMID: 33498789) (PMID: 29670702).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC44H75N5O10
Average Mass834.1090 Da
Monoisotopic Mass833.55139 Da
IUPAC Name(3S,6S,12R,15S,18R,21Z,24S,25S,26S)-18-[(2S)-butan-2-yl]-8,17,24-trihydroxy-3,4,10,13,21,25-hexamethyl-12-(2-methylpropyl)-26-[(2Z)-pent-2-en-2-yl]-6,15-bis(propan-2-yl)-1,19-dioxa-4,7,10,13,16-pentaazacyclohexacosa-7,16,21-triene-2,5,11,14,20-pentone
Traditional Name(3S,6S,12R,15S,18R,21Z,24S,25S,26S)-18-[(2S)-butan-2-yl]-8,17,24-trihydroxy-6,15-diisopropyl-3,4,10,13,21,25-hexamethyl-12-(2-methylpropyl)-26-[(2Z)-pent-2-en-2-yl]-1,19-dioxa-4,7,10,13,16-pentaazacyclohexacosa-7,16,21-triene-2,5,11,14,20-pentone
CAS Registry NumberNot Available
SMILES
CC\C=C(\C)[C@H]1OC(=O)[C@H](C)N(C)C(=O)[C@@H](N=C(O)CN(C)C(=O)[C@@H](CC(C)C)N(C)C(=O)[C@@H](N=C(O)[C@H](OC(=O)\C(C)=C/C[C@H](O)[C@@H]1C)[C@@H](C)CC)C(C)C)C(C)C
InChI Identifier
InChI=1S/C44H75N5O10/c1-17-19-28(10)37-30(12)33(50)21-20-29(11)43(56)59-38(27(9)18-2)39(52)46-36(26(7)8)42(55)49(16)32(22-24(3)4)40(53)47(14)23-34(51)45-35(25(5)6)41(54)48(15)31(13)44(57)58-37/h19-20,24-27,30-33,35-38,50H,17-18,21-23H2,1-16H3,(H,45,51)(H,46,52)/b28-19-,29-20-/t27-,30-,31-,32+,33-,35-,36-,37+,38+/m0/s1
InChI KeyXCPGQUJQUPDEFX-YWIOOLKYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Dolabella auriculariaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassPeptidomimetics
Sub ClassDepsipeptides
Direct ParentCyclic depsipeptides
Alternative Parents
Substituents
  • Cyclic depsipeptide
  • Macrolide lactam
  • Macrolide
  • Macrolactam
  • Alpha-amino acid ester
  • Alpha-amino acid or derivatives
  • Dicarboxylic acid or derivatives
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tertiary carboxylic acid amide
  • Secondary carboxylic acid amide
  • Secondary alcohol
  • Lactone
  • Lactam
  • Carboxylic acid ester
  • Carboxamide group
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP6.61ChemAxon
pKa (Strongest Acidic)3.75ChemAxon
pKa (Strongest Basic)1.45ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area198.94 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity227.33 m³·mol⁻¹ChemAxon
Polarizability92.81 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00034443
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101999231
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Tripathi A, Puddick J, Prinsep MR, Rottmann M, Chan KP, Chen DY, Tan LT: Lagunamide C, a cytotoxic cyclodepsipeptide from the marine cyanobacterium Lyngbya majuscula. Phytochemistry. 2011 Dec;72(18):2369-75. doi: 10.1016/j.phytochem.2011.08.019. Epub 2011 Sep 6. [PubMed:21903231 ]
  2. Takase S, Kurokawa R, Arai D, Kanemoto Kanto K, Okino T, Nakao Y, Kushiro T, Yoshida M, Matsumoto K: A quantitative shRNA screen identifies ATP1A1 as a gene that regulates cytotoxicity by aurilide B. Sci Rep. 2017 May 17;7(1):2002. doi: 10.1038/s41598-017-02016-4. [PubMed:28515454 ]
  3. Tripathi A, Fang W, Leong DT, Tan LT: Biochemical studies of the lagunamides, potent cytotoxic cyclic depsipeptides from the marine cyanobacterium Lyngbya majuscula. Mar Drugs. 2012 May;10(5):1126-1137. doi: 10.3390/md10051126. Epub 2012 May 23. [PubMed:22822361 ]
  4. Michon S, Cavelier F, Salom-Roig XJ: Synthesis and Biological Activities of Cyclodepsipeptides of Aurilide Family from Marine Origin. Mar Drugs. 2021 Jan 23;19(2):55. doi: 10.3390/md19020055. [PubMed:33498789 ]
  5. Kaneda M, Kawaguchi S, Fujii N, Ohno H, Oishi S: Structure-Activity Relationship Study on Odoamide: Insights into the Bioactivities of Aurilide-Family Hybrid Peptide-Polyketides. ACS Med Chem Lett. 2018 Mar 5;9(4):365-369. doi: 10.1021/acsmedchemlett.8b00028. eCollection 2018 Apr 12. [PubMed:29670702 ]
  6. LOTUS database [Link]