NP-MRD: Showing NP-Card for (2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid (NP0234850)

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Record Information

Version

2.0

Created at

2022-09-06 17:08:57 UTC

Updated at

2022-09-06 17:08:58 UTC

NP-MRD ID

NP0234850

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid

Description

Gymnastatin B belongs to the class of organic compounds known as cyclohexenones. Cyclohexenones are compounds containing a cylohexenone moiety, which is a six-membered aliphatic ring that carries a ketone and has one endocyclic double bond. (2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid was first documented in 2015 (PMID: 25600409). Based on a literature review a small amount of articles have been published on Gymnastatin B.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309062219082D          

 32 33  0  0  1  0            999 V2000
    1.6276   -8.8241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9131   -8.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9131   -7.5866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6276   -7.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3420   -7.5866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0565   -7.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7710   -7.5866    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7710   -8.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4855   -7.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1999   -7.5866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1999   -8.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9144   -7.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9144   -6.3491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6289   -5.9366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6289   -5.1116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3433   -6.3491    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.0578   -5.9366    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.1440   -5.1161    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9510   -4.9446    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.4661   -4.2771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8016   -3.5235    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3167   -2.8560    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    9.6221   -3.4372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9577   -2.6835    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1071   -4.1047    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.9275   -4.0184    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    9.7715   -4.8583    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.2564   -5.5258    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3635   -5.6590    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.8115   -6.2721    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.9830   -7.0791    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3699   -7.6311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  6  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  4  0  0  0
 14 16  2  0  0  0  0
 17 16  1  1  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  6  0  0  0
 25 27  1  0  0  0  0
 19 27  1  0  0  0  0
 27 28  1  1  0  0  0
 19 29  1  6  0  0  0
 29 30  1  0  0  0  0
 17 30  1  0  0  0  0
 30 31  1  1  0  0  0
 31 32  1  0  0  0  0
M  END

     RDKit          3D

 67 68  0  0  0  0  0  0  0  0999 V2000
   10.2216    0.2397   -0.1543 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7448    0.1802   -0.5858 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9504    0.6898    0.5594 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4541    0.7095    0.2761 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9077   -0.6354   -0.0245 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4971   -0.7740   -0.3150 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4327   -0.5056    0.7512 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4118    0.8308    1.3219 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1863   -1.1309    0.2666 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9901   -0.6376    0.1332 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6797    0.7468    0.4680 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0227   -1.5649   -0.3666 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2675   -1.1927   -0.5335 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2740   -2.1606   -1.0455 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9133   -3.4507   -1.3472 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4620   -1.7745   -1.1970 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9913   -0.4707   -0.9293 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.3181   -0.3617   -1.6555 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0174    0.6589   -0.7846 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.7712    1.9794   -1.3883 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7131    2.8770   -1.5258 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4100    4.4469   -2.2460 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -8.0581    2.5834   -1.0757 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0157    3.2735   -1.5160 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2395    1.4728   -0.1089 C   0  0  2  0  0  0  0  0  0  0  0  0
   -7.4350    1.9450    1.4034 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -7.4883    0.2854   -0.7283 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.0128   -0.0203   -1.9642 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5300    0.5430    0.4965 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4083   -0.2638    0.5023 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.5933   -1.4347    1.2070 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7492   -1.5359    2.3100 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4794    1.3236   -0.1963 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8283   -0.3713   -0.8235 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2303   -0.0907    0.9014 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4819   -0.8712   -0.8295 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5996    0.7946   -1.4777 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1690    0.1665    1.5123 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2311    1.7635    0.7251 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9318    1.2161    1.0677 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3687    1.3754   -0.6439 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2516   -1.3988    0.7447 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5124   -0.9932   -0.9396 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3083   -1.8254   -0.7287 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2316   -0.1564   -1.2446 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7621   -1.2039    1.5952 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6391    1.6987    0.7307 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4837    0.9200    1.9790 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1847    0.8852    2.1959 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3572   -2.2152   -0.0249 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2380    0.9300    1.4601 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4062    1.5126    0.1168 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2040    1.0154   -0.2240 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2135   -2.5847   -0.6157 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6098   -0.2126   -0.3072 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0801   -3.7825   -2.2836 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2973    0.3102   -1.2965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8484   -1.3232   -1.7046 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0968    0.0412   -2.6690 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7825    2.2069   -1.7252 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3048    1.2173    0.0463 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6223   -0.5655   -0.0443 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8002   -0.9401   -2.2305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6065    0.3143    1.0068 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6958   -1.5047    1.9650 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8726   -0.6962    3.0176 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8729   -2.5043    2.8319 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  2  0
 10 11  1  0
 10 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  1  0
 14 16  2  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 29  1  1
 29 30  1  0
 30 31  1  0
 31 32  1  0
 19 20  1  0
 20 21  2  0
 21 22  1  0
 21 23  1  0
 23 24  2  0
 23 25  1  0
 25 26  1  0
 25 27  1  0
 27 28  1  0
 30 17  1  0
 27 19  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  2 36  1  0
  2 37  1  0
  3 38  1  0
  3 39  1  0
  4 40  1  0
  4 41  1  0
  5 42  1  0
  5 43  1  0
  6 44  1  0
  6 45  1  0
  7 46  1  1
  8 47  1  0
  8 48  1  0
  8 49  1  0
  9 50  1  0
 11 51  1  0
 11 52  1  0
 11 53  1  0
 12 54  1  0
 13 55  1  0
 15 56  1  0
 17 57  1  6
 18 58  1  0
 18 59  1  0
 30 64  1  1
 32 65  1  0
 32 66  1  0
 32 67  1  0
 20 60  1  0
 25 61  1  1
 27 62  1  1
 28 63  1  0
M  END


  Mrv1652309062219082D          

 32 33  0  0  1  0            999 V2000
    1.6276   -8.8241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9131   -8.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9131   -7.5866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6276   -7.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3420   -7.5866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0565   -7.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7710   -7.5866    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7710   -8.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4855   -7.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1999   -7.5866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1999   -8.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9144   -7.1741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9144   -6.3491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6289   -5.9366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6289   -5.1116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3433   -6.3491    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.0578   -5.9366    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.1440   -5.1161    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9510   -4.9446    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.4661   -4.2771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8016   -3.5235    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3167   -2.8560    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    9.6221   -3.4372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9577   -2.6835    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1071   -4.1047    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.9275   -4.0184    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    9.7715   -4.8583    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.2564   -5.5258    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3635   -5.6590    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.8115   -6.2721    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.9830   -7.0791    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3699   -7.6311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  6  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
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 14 16  2  0  0  0  0
 17 16  1  1  0  0  0
 17 18  1  0  0  0  0
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 21 22  1  0  0  0  0
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 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  6  0  0  0
 25 27  1  0  0  0  0
 19 27  1  0  0  0  0
 27 28  1  1  0  0  0
 19 29  1  6  0  0  0
 29 30  1  0  0  0  0
 17 30  1  0  0  0  0
 30 31  1  1  0  0  0
 31 32  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0234850

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCC[C@@H](C)\C=C(/C)\C=C\C(O)=N[C@H]1C[C@@]2(O[C@H]1OC)C=C(Cl)C(=O)[C@H](Cl)[C@H]2O

> <INCHI_IDENTIFIER>
InChI=1S/C24H35Cl2NO5/c1-5-6-7-8-9-15(2)12-16(3)10-11-19(28)27-18-14-24(32-23(18)31-4)13-17(25)21(29)20(26)22(24)30/h10-13,15,18,20,22-23,30H,5-9,14H2,1-4H3,(H,27,28)/b11-10+,16-12+/t15-,18+,20+,22-,23-,24+/m1/s1

> <INCHI_KEY>
HCHKYWWJMUJBHB-NBSJDVKISA-N

> <FORMULA>
C24H35Cl2NO5

> <MOLECULAR_WEIGHT>
488.45

> <EXACT_MASS>
487.1892286

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
67

> <JCHEM_AVERAGE_POLARIZABILITY>
53.40878766509241

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2E,4E,6R)-N-[(2R,3S,5R,9R,10S)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid

> <JCHEM_LOGP>
5.867998851666666

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.865624481082447

> <JCHEM_PKA_STRONGEST_ACIDIC>
5.799414682203604

> <JCHEM_PKA_STRONGEST_BASIC>
2.561712901102611

> <JCHEM_POLAR_SURFACE_AREA>
88.35000000000001

> <JCHEM_REFRACTIVITY>
129.22439999999995

> <JCHEM_ROTATABLE_BOND_COUNT>
10

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2E,4E,6R)-N-[(2R,3S,5R,9R,10S)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  C   UNK     0       3.038 -16.472   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.704 -15.702   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.704 -14.162   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.038 -13.392   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.372 -14.162   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.705 -13.392   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       7.039 -14.162   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       7.039 -15.702   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.373 -13.392   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.707 -14.162   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       9.707 -15.702   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      11.040 -13.392   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      11.040 -11.852   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      12.374 -11.082   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      12.374  -9.542   0.000  0.00  0.00           O+0
HETATM   16  N   UNK     0      13.708 -11.852   0.000  0.00  0.00           N+0
HETATM   17  C   UNK     0      15.041 -11.082   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      15.202  -9.550   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      16.709  -9.230   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      15.803  -7.984   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      16.430  -6.577   0.000  0.00  0.00           C+0
HETATM   22 Cl   UNK     0      15.525  -5.331   0.000  0.00  0.00          Cl+0
HETATM   23  C   UNK     0      17.961  -6.416   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      18.588  -5.009   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      18.866  -7.662   0.000  0.00  0.00           C+0
HETATM   26 Cl   UNK     0      20.398  -7.501   0.000  0.00  0.00          Cl+0
HETATM   27  C   UNK     0      18.240  -9.069   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      19.145 -10.315   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0      17.479 -10.564   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      16.448 -11.708   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      16.768 -13.214   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      15.624 -14.245   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18   30                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20   27   29                                             
CONECT   20   19   21                                                       
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   19   28                                                  
CONECT   28   27                                                            
CONECT   29   19   30                                                       
CONECT   30   29   17   31                                                  
CONECT   31   30   32                                                       
CONECT   32   31                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   66    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₄H₃₅Cl₂NO₅

Average Mass

488.4500 Da

Monoisotopic Mass

487.18923 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CCCCCC[C@@H](C)\C=C(/C)\C=C\C(O)=N[C@H]1C[C@@]2(O[C@H]1OC)C=C(Cl)C(=O)[C@H](Cl)[C@H]2O

InChI Identifier

InChI=1S/C24H35Cl2NO5/c1-5-6-7-8-9-15(2)12-16(3)10-11-19(28)27-18-14-24(32-23(18)31-4)13-17(25)21(29)20(26)22(24)30/h10-13,15,18,20,22-23,30H,5-9,14H2,1-4H3,(H,27,28)/b11-10+,16-12+/t15-,18+,20+,22-,23-,24+/m1/s1

InChI Key

HCHKYWWJMUJBHB-NBSJDVKISA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cyclohexenones. Cyclohexenones are compounds containing a cylohexenone moiety, which is a six-membered aliphatic ring that carries a ketone and has one endocyclic double bond.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbonyl compounds

Direct Parent

Cyclohexenones

Alternative Parents

Substituents

Cyclohexenone
N-acyl-amine
Alpha-haloketone
Alpha-chloroketone
Oxolane
Carboxamide group
Chlorohydrin
Halohydrin
Secondary alcohol
Secondary carboxylic acid amide
Acetal
Carboxylic acid derivative
Oxacycle
Chloroalkene
Haloalkene
Vinyl chloride
Vinyl halide
Organoheterocyclic compound
Organohalogen compound
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organochloride
Organonitrogen compound
Aldehyde
Alkyl chloride
Alkyl halide
Organic nitrogen compound
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00028316

Chemspider ID

8895125

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10719786

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Hammerschmidt L, Aly AH, Abdel-Aziz M, Muller WE, Lin W, Daletos G, Proksch P: Cytotoxic acyl amides from the soil fungus Gymnascella dankaliensis. Bioorg Med Chem. 2015 Feb 15;23(4):712-9. doi: 10.1016/j.bmc.2014.12.068. Epub 2015 Jan 3. [PubMed:25600409 ]
LOTUS database [Link]

Showing NP-Card for (2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid (NP0234850)

MOL for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

3D MOL for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

3D SDF for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

3D-SDF for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

PDB for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

3D PDB for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

SMILES for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

INCHI for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

Structure for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)

3D Structure for NP0234850 ((2e,4e,6r)-n-[(2r,3s,5r,9r,10s)-7,9-dichloro-10-hydroxy-2-methoxy-8-oxo-1-oxaspiro[4.5]dec-6-en-3-yl]-4,6-dimethyldodeca-2,4-dienimidic acid)