NP-MRD: Showing NP-Card for [5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate (NP0234206)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-06 16:06:22 UTC

Updated at

2022-09-06 16:06:23 UTC

NP-MRD ID

NP0234206

Secondary Accession Numbers

None

Natural Product Identification

Common Name

[5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate

Description

[5-({6-[(Acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate belongs to the class of organic compounds known as coumaric acids and derivatives. These are aromatic compounds containing Aromatic compounds containing a cinnamic acid moiety (or a derivative thereof) hydroxylated at the C2 (ortho-), C3 (meta-), or C4 (para-) carbon atom of the benzene ring. [5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate is found in Smilax bracteata. [5-({6-[(Acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004251516222D          

 39 41  0  0  0  0            999 V2000
    0.1943   -8.8284    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5299   -8.0747    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3504   -7.9884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6859   -7.2348    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5064   -7.1485    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8420   -6.3949    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3570   -5.7274    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6926   -4.9737    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5131   -4.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2077   -4.3063    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5432   -3.5526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0583   -2.8852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3132   -2.1006    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6458   -1.6157    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1978   -1.0026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0048   -1.1741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0938   -1.0026    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3487   -0.2179    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7967    0.3952    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0516    1.1798    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4996    1.7929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3074    1.6213    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8594    2.2344    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6045    3.0191    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6664    2.0629    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8586    1.3513    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1135    2.1359    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4106    0.7382    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2176    0.9097    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1557   -0.0464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7077   -0.6595    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9784   -2.1006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1937   -1.8456    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2333   -2.8852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7484   -3.5526    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9913   -7.8160    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6558   -8.5697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8353   -8.6559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4997   -9.4096    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  6  5  1  4  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 14 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 20 26  1  0  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
 18 30  1  0  0  0  0
 30 31  1  0  0  0  0
 14 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  1  0  0  0  0
 12 34  1  0  0  0  0
 34 35  1  0  0  0  0
  5 36  2  0  0  0  0
 36 37  1  0  0  0  0
 37 38  2  0  0  0  0
  3 38  1  0  0  0  0
 38 39  1  0  0  0  0
M  END

     RDKit          3D

 71 73  0  0  0  0  0  0  0  0999 V2000
    6.1699    3.0426   -0.6328 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4488    2.4727   -0.6367 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6914    1.1508   -0.8838 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6062    0.3136   -1.1487 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6991   -1.0312   -1.4127 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6409   -1.9576   -1.6612 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3829   -1.9448   -1.6459 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2918   -1.0593   -1.3862 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4156    0.1175   -1.0425 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9542   -1.4854   -1.5097 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8223   -0.7035   -1.2713 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7651   -0.2928    0.1834 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3300    0.4677    0.4759 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2053   -0.2064    1.3036 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8170    0.1660    2.7420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9411    1.5538    2.8963 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5156    0.1495    1.0982 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4685   -0.4475    1.8538 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.2459   -1.2435    1.0001 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1895   -0.5834    0.2779 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.6385    0.2328   -0.8821 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7786    0.8409   -1.5072 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6464    1.6639   -2.6135 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8168    2.2969   -3.2664 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5017    1.8637   -3.0547 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1084    0.2900    1.0531 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.4422   -0.0508    0.8389 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8026    0.1670    2.5226 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.1254   -1.0520    3.0648 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3155    0.5008    2.6729 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.1669    1.8205    2.3160 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8868   -1.6346    1.1030 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1589   -2.4613    2.1900 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6246   -1.5963    0.9746 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0529   -2.6937    0.2005 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0278   -1.5356   -1.3993 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1041   -0.7340   -1.1428 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9415    0.5997   -0.8863 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0587    1.3762   -0.6312 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5255    2.5136    0.0872 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7185    2.9004   -1.6399 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2738    4.1236   -0.4202 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6355    0.7605   -1.1622 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0563   -2.9973   -1.9678 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9471   -3.0097   -1.9408 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7940    0.1920   -1.9335 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0612   -1.3191   -1.5505 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7264    0.2029    0.4196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4095   -0.3997    3.4815 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2478   -0.0624    2.9508 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9982    1.9669    1.9895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0662   -1.1966    2.6010 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8167   -1.3814   -0.2219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1972   -0.4402   -1.6472 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9069    0.9917   -0.5673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1395    3.2310   -2.7705 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6133    2.5477   -4.3267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6950    1.6121   -3.2428 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0194    1.3663    0.7963 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6561   -0.9841    1.0679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3995    0.9440    3.0401 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4954   -1.2351    3.8073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1099    0.4271    3.7630 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0827    2.4360    3.1085 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2560   -2.0633    0.1485 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7318   -3.2300    1.9617 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1536   -1.5659    1.9295 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6348   -3.3008    0.7241 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2265   -2.5847   -1.5937 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.1076   -1.1857   -1.1467 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0113    2.3671   -0.4350 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 14 17  1  6
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 23 25  2  0
 20 26  1  0
 26 27  1  0
 26 28  1  0
 28 29  1  0
 28 30  1  0
 30 31  1  0
 14 32  1  0
 32 33  1  0
 32 34  1  0
 34 35  1  0
  5 36  2  0
 36 37  1  0
 37 38  2  0
 38 39  1  0
 38  3  1  0
 34 12  1  0
 30 18  1  0
  1 40  1  0
  1 41  1  0
  1 42  1  0
  4 43  1  0
  6 44  1  0
  7 45  1  0
 11 46  1  0
 11 47  1  0
 12 48  1  1
 15 49  1  0
 15 50  1  0
 16 51  1  0
 18 52  1  1
 20 53  1  6
 21 54  1  0
 21 55  1  0
 24 56  1  0
 24 57  1  0
 24 58  1  0
 26 59  1  6
 27 60  1  0
 28 61  1  1
 29 62  1  0
 30 63  1  1
 31 64  1  0
 32 65  1  6
 33 66  1  0
 34 67  1  1
 35 68  1  0
 36 69  1  0
 37 70  1  0
 39 71  1  0
M  END


  Mrv1533004251516222D          

 39 41  0  0  0  0            999 V2000
    0.1943   -8.8284    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5299   -8.0747    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3504   -7.9884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6859   -7.2348    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5064   -7.1485    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8420   -6.3949    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3570   -5.7274    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6926   -4.9737    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5131   -4.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2077   -4.3063    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5432   -3.5526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0583   -2.8852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3132   -2.1006    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6458   -1.6157    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1978   -1.0026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0048   -1.1741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0938   -1.0026    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3487   -0.2179    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7967    0.3952    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0516    1.1798    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4996    1.7929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3074    1.6213    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8594    2.2344    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6045    3.0191    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6664    2.0629    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8586    1.3513    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1135    2.1359    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4106    0.7382    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2176    0.9097    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1557   -0.0464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7077   -0.6595    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9784   -2.1006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1937   -1.8456    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2333   -2.8852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7484   -3.5526    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9913   -7.8160    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6558   -8.5697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8353   -8.6559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4997   -9.4096    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  6  5  1  4  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 14 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 20 26  1  0  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
 18 30  1  0  0  0  0
 30 31  1  0  0  0  0
 14 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  1  0  0  0  0
 12 34  1  0  0  0  0
 34 35  1  0  0  0  0
  5 36  2  0  0  0  0
 36 37  1  0  0  0  0
 37 38  2  0  0  0  0
  3 38  1  0  0  0  0
 38 39  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0234206

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(C=CC(=O)OCC2OC(CO)(OC3OC(COC(C)=O)C(O)C(O)C3O)C(O)C2O)=CC=C1O

> <INCHI_IDENTIFIER>
InChI=1S/C24H32O15/c1-11(26)35-8-15-18(29)20(31)21(32)23(37-15)39-24(10-25)22(33)19(30)16(38-24)9-36-17(28)6-4-12-3-5-13(27)14(7-12)34-2/h3-7,15-16,18-23,25,27,29-33H,8-10H2,1-2H3

> <INCHI_KEY>
ZIUKDKVKRXUKAP-UHFFFAOYSA-N

> <FORMULA>
C24H32O15

> <MOLECULAR_WEIGHT>
560.505

> <EXACT_MASS>
560.17412033

> <JCHEM_ACCEPTOR_COUNT>
13

> <JCHEM_ATOM_COUNT>
71

> <JCHEM_AVERAGE_POLARIZABILITY>
53.49318948803055

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
[5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate

> <ALOGPS_LOGP>
-0.74

> <JCHEM_LOGP>
-1.515055422666666

> <ALOGPS_LOGS>
-2.24

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.845909763300943

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.86321227022896

> <JCHEM_PKA_STRONGEST_BASIC>
-3.455826300967913

> <JCHEM_POLAR_SURFACE_AREA>
231.12999999999997

> <JCHEM_REFRACTIVITY>
125.93740000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
12

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
3.25e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 25-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   25-APR-15         0                                  
HETATM    1  C   UNK     0       0.363 -16.480   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       0.989 -15.073   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       2.521 -14.912   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.147 -13.505   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.679 -13.344   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.305 -11.937   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.400 -10.691   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.026  -9.284   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       6.558  -9.123   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0       4.121  -8.038   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       4.747  -6.632   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.842  -5.386   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       4.318  -3.921   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       3.072  -3.016   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.103  -1.871   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       5.609  -2.192   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0       2.042  -1.871   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       2.518  -0.407   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       1.487   0.738   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       1.963   2.202   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       0.933   3.347   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      -0.574   3.027   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      -1.604   4.171   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      -1.128   5.636   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      -3.111   3.851   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       3.469   2.522   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       3.945   3.987   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       4.500   1.378   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       6.006   1.698   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       4.024  -0.087   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       5.054  -1.231   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       1.826  -3.921   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0       0.362  -3.445   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0       2.302  -5.386   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0       1.397  -6.632   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0       5.584 -14.590   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       4.957 -15.997   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0       3.426 -16.158   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0       2.799 -17.565   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   38                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   36                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   34                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   17   32                                             
CONECT   15   14   16                                                       
CONECT   16   15                                                            
CONECT   17   14   18                                                       
CONECT   18   17   19   30                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21   26                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23                                                            
CONECT   26   20   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   18   31                                                  
CONECT   31   30                                                            
CONECT   32   14   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32   12   35                                                  
CONECT   35   34                                                            
CONECT   36    5   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37    3   39                                                  
CONECT   39   38                                                            
MASTER        0    0    0    0    0    0    0    0   39    0   82    0
END

View in JSmol

Synonyms

Value	Source
[5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoic acid	Generator

Chemical Formula

C₂₄H₃₂O₁₅

Average Mass

560.5050 Da

Monoisotopic Mass

560.17412 Da

IUPAC Name

[5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate

Traditional Name

[5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate

CAS Registry Number

Not Available

SMILES

COC1=CC(C=CC(=O)OCC2OC(CO)(OC3OC(COC(C)=O)C(O)C(O)C3O)C(O)C2O)=CC=C1O

InChI Identifier

InChI=1S/C24H32O15/c1-11(26)35-8-15-18(29)20(31)21(32)23(37-15)39-24(10-25)22(33)19(30)16(38-24)9-36-17(28)6-4-12-3-5-13(27)14(7-12)34-2/h3-7,15-16,18-23,25,27,29-33H,8-10H2,1-2H3

InChI Key

ZIUKDKVKRXUKAP-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Smilax bracteata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as coumaric acids and derivatives. These are aromatic compounds containing Aromatic compounds containing a cinnamic acid moiety (or a derivative thereof) hydroxylated at the C2 (ortho-), C3 (meta-), or C4 (para-) carbon atom of the benzene ring.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Cinnamic acids and derivatives

Sub Class

Hydroxycinnamic acids and derivatives

Direct Parent

Coumaric acids and derivatives

Alternative Parents

Substituents

Coumaric acid or derivatives
Cinnamic acid ester
C-glycosyl compound
Disaccharide
Glycosyl compound
O-glycosyl compound
Methoxyphenol
Anisole
Phenoxy compound
Phenol ether
Styrene
Methoxybenzene
1-hydroxy-2-unsubstituted benzenoid
Fatty acid ester
Ketal
Alkyl aryl ether
Phenol
Benzenoid
Oxane
Fatty acyl
Dicarboxylic acid or derivatives
Monocyclic benzene moiety
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Tetrahydrofuran
Secondary alcohol
Carboxylic acid ester
Polyol
Oxacycle
Acetal
Organoheterocyclic compound
Ether
Carboxylic acid derivative
Primary alcohol
Carbonyl group
Alcohol
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.74	ALOGPS
logP	-1.5	ChemAxon
logS	-2.2	ALOGPS
pKa (Strongest Acidic)	9.86	ChemAxon
pKa (Strongest Basic)	-3.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	13	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	231.13 Å²	ChemAxon
Rotatable Bond Count	12	ChemAxon
Refractivity	125.94 m³·mol⁻¹	ChemAxon
Polarizability	53.49 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

85396278

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for [5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate (NP0234206)

MOL for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

3D MOL for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

3D SDF for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

3D-SDF for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

PDB for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

3D PDB for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

SMILES for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

INCHI for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

Structure for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)

3D Structure for NP0234206 ([5-({6-[(acetyloxy)methyl]-3,4,5-trihydroxyoxan-2-yl}oxy)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl 3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate)