NP-MRD: Showing NP-Card for 21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid (NP0234022)

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Record Information

Version

2.0

Created at

2022-09-06 15:50:17 UTC

Updated at

2022-09-06 15:50:17 UTC

NP-MRD ID

NP0234022

Secondary Accession Numbers

None

Natural Product Identification

Common Name

21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid

Description

21-Hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]Tetracosane-11-carboxylic acid belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. 21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid is found in Tripterygium wilfordii. 21-Hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]Tetracosane-11-carboxylic acid is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004241508262D          

 35 40  0  0  0  0            999 V2000
    1.3612   -1.5354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  3 35  1  0  0  0  0
M  END

     RDKit          3D

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M  END


  Mrv1533004241508262D          

 35 40  0  0  0  0            999 V2000
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    1.9113   -1.1113    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5841   -1.9278    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7270   -2.0025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3763   -2.7492    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2346   -1.2914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4964   -1.6739    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0683   -0.4831    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6113    0.0593    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 13 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
  6 23  1  0  0  0  0
 11 23  1  0  0  0  0
 23 24  1  0  0  0  0
 15 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
  7 28  1  0  0  0  0
  3 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 30 32  1  0  0  0  0
  2 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  1  0  0  0  0
 34 35  1  0  0  0  0
  3 35  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0234022

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1C23COC1(O)C(=O)CC2C1(C)CCC2(C)C4CC(C)(CCC4(C)CCC2(C)C1CC3)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C30H46O5/c1-18-29-8-7-19-26(4,20(29)15-22(31)30(18,34)35-17-29)12-14-28(6)21-16-25(3,23(32)33)10-9-24(21,2)11-13-27(19,28)5/h18-21,34H,7-17H2,1-6H3,(H,32,33)

> <INCHI_KEY>
IDWSINSLFUFGJH-UHFFFAOYSA-N

> <FORMULA>
C30H46O5

> <MOLECULAR_WEIGHT>
486.693

> <EXACT_MASS>
486.334524581

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
81

> <JCHEM_AVERAGE_POLARIZABILITY>
55.50121501503337

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid

> <ALOGPS_LOGP>
4.98

> <JCHEM_LOGP>
5.987980924333331

> <ALOGPS_LOGS>
-6.00

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
10.143417160816877

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.7732783702366435

> <JCHEM_PKA_STRONGEST_BASIC>
-4.382508631436841

> <JCHEM_POLAR_SURFACE_AREA>
83.83

> <JCHEM_REFRACTIVITY>
133.17779999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.92e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-APR-15         0                                  
HETATM    1  C   UNK     0       2.541  -2.866   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.594  -1.652   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.575  -0.749   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.287   0.656   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.821   0.817   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.737  -0.435   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.130  -1.850   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.540  -3.273   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.053  -3.083   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.582  -2.901   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.188  -1.485   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       9.111  -2.718   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       9.718  -1.303   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      10.640  -2.536   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      12.169  -2.354   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      12.084  -3.891   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      12.776  -0.938   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      11.853   0.295   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      10.324   0.113   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      10.931   1.528   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       9.402   1.346   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       7.872   1.163   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.266  -0.252   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.343   0.981   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      13.669  -2.705   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      14.114  -4.179   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      14.723  -1.582   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       3.568  -2.074   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       2.957  -3.598   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       1.357  -3.738   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       0.702  -5.132   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       0.438  -2.411   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      -0.927  -3.125   0.000  0.00  0.00           O+0
HETATM   34  O   UNK     0      -0.128  -0.902   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0       1.141   0.111   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   32                                                  
CONECT    3    2    4   28   35                                             
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   23                                                  
CONECT    7    6    8    9   28                                             
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13   23                                             
CONECT   12   11                                                            
CONECT   13   11   14   19                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   17   25                                             
CONECT   16   15                                                            
CONECT   17   15   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   13   20   21                                             
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22    6   11   24                                             
CONECT   24   23                                                            
CONECT   25   15   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25                                                            
CONECT   28    7    3   29                                                  
CONECT   29   28   30                                                       
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30    2   33   34                                             
CONECT   33   32                                                            
CONECT   34   32   35                                                       
CONECT   35   34    3                                                       
MASTER        0    0    0    0    0    0    0    0   35    0   80    0
END

View in JSmol

Synonyms

Value	Source
21-Hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0,.0,.0,.0,]tetracosane-11-carboxylate	Generator
21-Hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylate	Generator

Chemical Formula

C₃₀H₄₆O₅

Average Mass

486.6930 Da

Monoisotopic Mass

486.33452 Da

IUPAC Name

21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid

Traditional Name

21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid

CAS Registry Number

Not Available

SMILES

CC1C23COC1(O)C(=O)CC2C1(C)CCC2(C)C4CC(C)(CCC4(C)CCC2(C)C1CC3)C(O)=O

InChI Identifier

InChI=1S/C30H46O5/c1-18-29-8-7-19-26(4,20(29)15-22(31)30(18,34)35-17-29)12-14-28(6)21-16-25(3,23(32)33)10-9-24(21,2)11-13-27(19,28)5/h18-21,34H,7-17H2,1-6H3,(H,32,33)

InChI Key

IDWSINSLFUFGJH-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Tripterygium wilfordii	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
Oxepane
Cyclic alcohol
Tetrahydrofuran
Hemiacetal
Ketone
Carboxylic acid derivative
Carboxylic acid
Monocarboxylic acid or derivatives
Oxacycle
Organoheterocyclic compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Organic oxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.98	ALOGPS
logP	5.99	ChemAxon
logS	-6	ALOGPS
pKa (Strongest Acidic)	4.77	ChemAxon
pKa (Strongest Basic)	-4.4	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	83.83 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	133.18 m³·mol⁻¹	ChemAxon
Polarizability	55.5 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid (NP0234022)

MOL for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

3D MOL for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

3D SDF for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

3D-SDF for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

PDB for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

3D PDB for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

SMILES for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

INCHI for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

Structure for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)

3D Structure for NP0234022 (21-hydroxy-5,8,11,14,17,24-hexamethyl-20-oxo-22-oxahexacyclo[19.2.1.0¹,¹⁸.0⁴,¹⁷.0⁵,¹⁴.0⁸,¹³]tetracosane-11-carboxylic acid)