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Record Information
Version2.0
Created at2022-09-06 12:26:13 UTC
Updated at2022-09-06 12:26:13 UTC
NP-MRD IDNP0231530
Secondary Accession NumbersNone
Natural Product Identification
Common Name(6z,21z)-1,16-diazatetracyclo[27.3.1.1¹²,¹⁶.0¹³,³⁰]tetratriaconta-6,21-diene
DescriptionHaliclonacyclamine A belongs to the class of organic compounds known as piperidines. Piperidines are compounds containing a piperidine ring, which is a saturated aliphatic six-member ring with one nitrogen atom and five carbon atoms. (6z,21z)-1,16-diazatetracyclo[27.3.1.1¹²,¹⁶.0¹³,³⁰]tetratriaconta-6,21-diene was first documented in 2009 (PMID: 19801875). Based on a literature review a small amount of articles have been published on haliclonacyclamine A (PMID: 29476895) (PMID: 22068547) (PMID: 21895455) (PMID: 18690486).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC32H56N2
Average Mass468.8140 Da
Monoisotopic Mass468.44435 Da
IUPAC Name(6Z,21Z)-1,16-diazatetracyclo[27.3.1.1^{12,16}.0^{13,30}]tetratriaconta-6,21-diene
Traditional Name(6Z,21Z)-1,16-diazatetracyclo[27.3.1.1^{12,16}.0^{13,30}]tetratriaconta-6,21-diene
CAS Registry NumberNot Available
SMILES
C1CN2CC3CCCCCC\C=C/CCCCN4CCC(C(C4)CCCC\C=C/CCCC2)C13
InChI Identifier
InChI=1S/C32H56N2/c1-2-5-9-13-17-23-33-25-21-32-30(28-33)20-16-12-8-4-6-10-14-18-24-34-26-22-31(32)29(27-34)19-15-11-7-3-1/h2,4-6,29-32H,1,3,7-28H2/b5-2-,6-4-
InChI KeyXTYBUGVFBCQSHE-IMVVNQANSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
Description Belongs to the class of organic compounds known as piperidines. Piperidines are compounds containing a piperidine ring, which is a saturated aliphatic six-member ring with one nitrogen atom and five carbon atoms.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPiperidines
Sub ClassNot Available
Direct ParentPiperidines
Alternative Parents
Substituents
  • Piperidine
  • Tertiary aliphatic amine
  • Tertiary amine
  • Azacycle
  • Organic nitrogen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Amine
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP8.36ChemAxon
pKa (Strongest Basic)9.53ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area6.48 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity152.88 m³·mol⁻¹ChemAxon
Polarizability61.14 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound102423951
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Tietjen I, Williams DE, Read S, Kuang XT, Mwimanzi P, Wilhelm E, Markle T, Kinloch NN, Naphen CN, Tenney K, Mesplede T, Wainberg MA, Crews P, Bell B, Andersen RJ, Brumme ZL, Brockman MA: Inhibition of NF-kappaB-dependent HIV-1 replication by the marine natural product bengamide A. Antiviral Res. 2018 Apr;152:94-103. doi: 10.1016/j.antiviral.2018.02.017. Epub 2018 Feb 22. [PubMed:29476895 ]
  2. Banwell MG, Coster MJ, Hungerford NL, Garson MJ, Su S, Kotze AC, Munro MH: 3,4'-Linked bis(piperidines) related to the haliclonacyclamine class of marine alkaloids: synthesis using crossed-aldol chemistry and preliminary biological evaluations. Org Biomol Chem. 2012 Jan 7;10(1):154-61. doi: 10.1039/c1ob06418e. Epub 2011 Nov 8. [PubMed:22068547 ]
  3. Mani L, Petek S, Valentin A, Chevalley S, Folcher E, Aalbersberg W, Debitus C: The in vivo anti-plasmodial activity of haliclonacyclamine A, an alkaloid from the marine sponge, Haliclona sp. Nat Prod Res. 2011 Dec;25(20):1923-30. doi: 10.1080/14786419.2010.547858. Epub 2011 Sep 6. [PubMed:21895455 ]
  4. Arai M, Ishida S, Setiawan A, Kobayashi M: Haliclonacyclamines, tetracyclic alkylpiperidine alkaloids, as anti-dormant mycobacterial substances from a marine sponge of Haliclona sp. Chem Pharm Bull (Tokyo). 2009 Oct;57(10):1136-8. doi: 10.1248/cpb.57.1136. [PubMed:19801875 ]
  5. Roper KE, Beamish H, Garson MJ, Skilleter GA, Degnan BM: Convergent antifouling activities of structurally distinct bioactive compounds synthesized within two sympatric Haliclona demosponges. Mar Biotechnol (NY). 2009 Mar-Apr;11(2):188-98. doi: 10.1007/s10126-008-9132-7. Epub 2008 Aug 9. [PubMed:18690486 ]
  6. LOTUS database [Link]