NP-MRD: Showing NP-Card for 2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol (NP0230747)

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Record Information

Version

2.0

Created at

2022-09-06 11:17:48 UTC

Updated at

2022-09-06 11:17:48 UTC

NP-MRD ID

NP0230747

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol

Description

2,5-Dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)-1H-indol-3-yl]benzene-1,4-diol belongs to the class of organic compounds known as phenylpyrroles. These are polycyclic aromatic compounds containing a benzene ring linked to a pyrrole ring through a CC or CN bond. Based on a literature review very few articles have been published on 2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)-1H-indol-3-yl]benzene-1,4-diol.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309062213172D          

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M  END

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M  END


  Mrv1652309062213172D          

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    4.1256   -0.7305    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3805    0.0541    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5241   -0.1325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2386   -0.5450    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9531   -0.1325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9531    0.6925    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2386    1.1050    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5241    0.6925    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  3  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 12 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 19 22  1  0  0  0  0
 22 23  2  0  0  0  0
 18 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 16 29  1  0  0  0  0
 24 29  1  0  0  0  0
 15 30  1  0  0  0  0
 30 31  1  0  0  0  0
 30 32  2  0  0  0  0
  9 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
  8 35  1  0  0  0  0
 35 36  2  0  0  0  0
 36 37  1  0  0  0  0
 37 38  2  0  0  0  0
 38 39  1  0  0  0  0
 39 40  2  0  0  0  0
 35 40  1  0  0  0  0
  6 40  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0230747

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C(O)C(C2=CN(C3=CC=CC=C23)C(C)(C)C=C)=C(OC)C(O)=C1C1=CN(C2=CC=CC=C12)C(C)(C)C=C

> <INCHI_IDENTIFIER>
InChI=1S/C34H36N2O4/c1-9-33(3,4)35-19-23(21-15-11-13-17-25(21)35)27-29(37)32(40-8)28(30(38)31(27)39-7)24-20-36(34(5,6)10-2)26-18-14-12-16-22(24)26/h9-20,37-38H,1-2H2,3-8H3

> <INCHI_KEY>
HSYCKNMCPZNYBK-UHFFFAOYSA-N

> <FORMULA>
C34H36N2O4

> <MOLECULAR_WEIGHT>
536.672

> <EXACT_MASS>
536.267507647

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
76

> <JCHEM_AVERAGE_POLARIZABILITY>
61.083930481283495

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)-1H-indol-3-yl]benzene-1,4-diol

> <JCHEM_LOGP>
7.846902515333332

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.490054418289366

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.746054603955674

> <JCHEM_PKA_STRONGEST_BASIC>
-4.612126017903893

> <JCHEM_POLAR_SURFACE_AREA>
68.78

> <JCHEM_REFRACTIVITY>
161.62439999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  C   UNK     0      10.792   5.842   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       9.762   4.698   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      10.238   3.233   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      11.702   3.709   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.773   2.757   0.000  0.00  0.00           C+0
HETATM    6  N   UNK     0      10.714   1.769   0.000  0.00  0.00           N+0
HETATM    7  C   UNK     0       9.809   0.523   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.714  -0.723   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      10.238  -2.188   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      11.268  -3.332   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      12.775  -3.012   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0      10.792  -4.797   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      11.823  -5.941   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0      11.347  -7.406   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       9.286  -5.117   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.810  -6.582   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       9.715  -7.828   0.000  0.00  0.00           C+0
HETATM   18  N   UNK     0       8.810  -9.074   0.000  0.00  0.00           N+0
HETATM   19  C   UNK     0       9.286 -10.538   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       7.821 -11.014   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      10.751 -10.062   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       9.762 -12.003   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      11.268 -12.323   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       7.346  -8.598   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.012  -9.368   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       4.678  -8.598   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       4.678  -7.058   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       6.012  -6.288   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       7.346  -7.058   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       8.256  -3.973   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       6.749  -4.293   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       8.732  -2.508   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0       7.701  -1.364   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0       8.177   0.101   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      12.178  -0.247   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      13.512  -1.017   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      14.846  -0.247   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      14.846   1.293   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      13.512   2.063   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      12.178   1.293   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5    6                                             
CONECT    4    3                                                            
CONECT    5    3                                                            
CONECT    6    3    7   40                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   35                                                  
CONECT    9    8   10   32                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   15                                                  
CONECT   13   12   14                                                       
CONECT   14   13                                                            
CONECT   15   12   16   30                                                  
CONECT   16   15   17   29                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19   24                                                  
CONECT   19   18   20   21   22                                             
CONECT   20   19                                                            
CONECT   21   19                                                            
CONECT   22   19   23                                                       
CONECT   23   22                                                            
CONECT   24   18   25   29                                                  
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   16   24                                                  
CONECT   30   15   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30    9   33                                                  
CONECT   33   32   34                                                       
CONECT   34   33                                                            
CONECT   35    8   36   40                                                  
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   35    6                                                  
MASTER        0    0    0    0    0    0    0    0   40    0   88    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₄H₃₆N₂O₄

Average Mass

536.6720 Da

Monoisotopic Mass

536.26751 Da

IUPAC Name

2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)-1H-indol-3-yl]benzene-1,4-diol

Traditional Name

2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol

CAS Registry Number

Not Available

SMILES

COC1=C(O)C(C2=CN(C3=CC=CC=C23)C(C)(C)C=C)=C(OC)C(O)=C1C1=CN(C2=CC=CC=C12)C(C)(C)C=C

InChI Identifier

InChI=1S/C34H36N2O4/c1-9-33(3,4)35-19-23(21-15-11-13-17-25(21)35)27-29(37)32(40-8)28(30(38)31(27)39-7)24-20-36(34(5,6)10-2)26-18-14-12-16-22(24)26/h9-20,37-38H,1-2H2,3-8H3

InChI Key

HSYCKNMCPZNYBK-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenylpyrroles. These are polycyclic aromatic compounds containing a benzene ring linked to a pyrrole ring through a CC or CN bond.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Pyrroles

Sub Class

Substituted pyrroles

Direct Parent

Phenylpyrroles

Alternative Parents

Substituents

3-phenylpyrrole
Methoxyphenol
Dimethoxybenzene
P-dimethoxybenzene
N-alkylindole
Indole
Indole or derivatives
Methoxybenzene
Hydroquinone
Phenoxy compound
Phenol ether
Anisole
Phenol
Alkyl aryl ether
Monocyclic benzene moiety
Benzenoid
Heteroaromatic compound
Azacycle
Ether
Organooxygen compound
Organic oxygen compound
Hydrocarbon derivative
Organopnictogen compound
Organonitrogen compound
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	7.85	ChemAxon
pKa (Strongest Acidic)	9.75	ChemAxon
pKa (Strongest Basic)	-4.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	68.78 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	161.62 m³·mol⁻¹	ChemAxon
Polarizability	61.08 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163017257

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol (NP0230747)

MOL for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

3D MOL for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

3D SDF for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

3D-SDF for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

PDB for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

3D PDB for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

SMILES for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

INCHI for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

Structure for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)

3D Structure for NP0230747 (2,5-dimethoxy-3,6-bis[1-(2-methylbut-3-en-2-yl)indol-3-yl]benzene-1,4-diol)