NP-MRD: Showing NP-Card for methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate (NP0230690)

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Record Information

Version

2.0

Created at

2022-09-06 11:13:19 UTC

Updated at

2022-09-06 11:13:19 UTC

NP-MRD ID

NP0230690

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate

Description

Apoterin S belongs to the class of organic compounds known as yohimbine alkaloids. These are alkaloids containing the pentacyclic yohimban skeleton. The Yohimbinoid alkaloids contain a carbocyclic ring E arising through C-17 to C-18 bond formation in a corynantheine precursor. methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate is found in Aspidosperma excelsum, Rauvolfia semperflorens, Rauvolfia serpentina, Vinca major and Vinca minor. Based on a literature review very few articles have been published on Apoterin S.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309062213132D          

 46 51  0  0  0  0            999 V2000
    3.1037   -1.1001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8316   -1.8790    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3700   -2.5041    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1805   -2.3503    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0978   -3.2829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6362   -3.9080    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4468   -3.7542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9852   -4.3793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7957   -4.2256    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2239   -3.5204    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.0269   -3.7096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7048   -3.2395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4509   -3.5916    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1289   -3.1215    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.8750   -3.4735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5191   -4.4138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8411   -4.8839    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0950   -4.5318    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3342   -4.8507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0620   -5.6295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2515   -5.7833    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7131   -5.1582    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.9025   -5.3119    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3641   -4.6868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5535   -4.8405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0151   -4.2154    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2046   -4.3692    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    0.1219   -5.3017    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1503   -6.0805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.1262   -8.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.3098   -5.7629    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8482   -5.1378    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5760   -4.3590    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4992   -5.6092    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2873   -3.4366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7489   -2.8115    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0210   -2.0327    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
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 34 37  2  0  0  0  0
 37 38  1  0  0  0  0
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 37 40  1  0  0  0  0
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 41 42  1  0  0  0  0
 40 43  2  0  0  0  0
 32 43  1  0  0  0  0
 26 44  1  0  0  0  0
  5 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
M  END

     RDKit          3D

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   -2.1064   -3.5291    3.0692 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5911   -3.1146    1.8730 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309062213132D          

 46 51  0  0  0  0            999 V2000
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    3.0978   -3.2829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6362   -3.9080    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4468   -3.7542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9852   -4.3793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7957   -4.2256    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2239   -3.5204    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.0269   -3.7096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7048   -3.2395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4509   -3.5916    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1289   -3.1215    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.8750   -3.4735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5191   -4.4138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8411   -4.8839    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0950   -4.5318    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3342   -4.8507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0620   -5.6295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2515   -5.7833    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7131   -5.1582    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.9025   -5.3119    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3641   -4.6868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5535   -4.8405    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0151   -4.2154    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2046   -4.3692    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9324   -5.1480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4709   -5.7731    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1219   -5.3017    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1503   -6.0805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9608   -6.2343    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2329   -7.0131    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0435   -7.1668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3156   -7.9456    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1262   -8.0993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5819   -6.5417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3925   -6.6954    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6646   -7.4743    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3098   -5.7629    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8482   -5.1378    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5760   -4.3590    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4992   -5.6092    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2873   -3.4366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7489   -2.8115    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0210   -2.0327    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 13 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 11 18  1  0  0  0  0
 18 19  1  0  0  0  0
  9 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
  8 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
  6 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 28 30  1  0  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 32 33  2  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 34 37  2  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 37 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 40 43  2  0  0  0  0
 32 43  1  0  0  0  0
 26 44  1  0  0  0  0
  5 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0230690

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1C(CC2CN3CCC4=C(NC5=CC(OC)=CC=C45)C3CC2C1C(=O)OC)OC(=O)\C=C\C1=CC(OC)=C(OC)C(OC)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C35H42N2O9/c1-40-21-8-9-22-23-11-12-37-18-20-15-29(46-30(38)10-7-19-13-27(41-2)33(43-4)28(14-19)42-3)34(44-5)31(35(39)45-6)24(20)17-26(37)32(23)36-25(22)16-21/h7-10,13-14,16,20,24,26,29,31,34,36H,11-12,15,17-18H2,1-6H3/b10-7+

> <INCHI_KEY>
SZLZWPPUNLXJEA-JXMROGBWSA-N

> <FORMULA>
C35H42N2O9

> <MOLECULAR_WEIGHT>
634.726

> <EXACT_MASS>
634.28903094

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
88

> <JCHEM_AVERAGE_POLARIZABILITY>
69.79485906534565

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
methyl 6,18-dimethoxy-17-{[(2E)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0^{2,10}.0^{4,9}.0^{15,20}]henicosa-2(10),4,6,8-tetraene-19-carboxylate

> <JCHEM_LOGP>
4.070086811999998

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
16.29011270611733

> <JCHEM_PKA_STRONGEST_BASIC>
7.01525683211072

> <JCHEM_POLAR_SURFACE_AREA>
117.78000000000003

> <JCHEM_REFRACTIVITY>
171.1641999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
methyl 6,18-dimethoxy-17-{[(2E)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0^{2,10}.0^{4,9}.0^{15,20}]henicosa-2(10),4,6,8-tetraene-19-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  C   UNK     0       5.794  -2.054   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       5.286  -3.507   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       6.291  -4.674   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       7.804  -4.387   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       5.783  -6.128   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.788  -7.295   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.301  -7.008   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.306  -8.175   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      10.819  -7.888   0.000  0.00  0.00           C+0
HETATM   10  N   UNK     0      11.618  -6.571   0.000  0.00  0.00           N+0
HETATM   11  C   UNK     0      13.117  -6.925   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      14.382  -6.047   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      15.775  -6.704   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      17.041  -5.827   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      18.433  -6.484   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      15.902  -8.239   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      14.637  -9.117   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      13.244  -8.459   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      11.824  -9.055   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      11.316 -10.508   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       9.803 -10.795   0.000  0.00  0.00           C+0
HETATM   22  N   UNK     0       8.798  -9.629   0.000  0.00  0.00           N+0
HETATM   23  C   UNK     0       7.285  -9.916   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.280  -8.749   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       4.767  -9.036   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       3.762  -7.869   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       2.249  -8.156   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       1.741  -9.610   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       2.746 -10.776   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       0.228  -9.897   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -0.280 -11.350   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -1.793 -11.637   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -2.302 -13.091   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      -3.815 -13.378   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      -4.323 -14.832   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      -5.836 -15.119   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      -4.820 -12.211   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0      -6.333 -12.498   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0      -6.841 -13.952   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      -4.312 -10.757   0.000  0.00  0.00           C+0
HETATM   41  O   UNK     0      -5.317  -9.591   0.000  0.00  0.00           O+0
HETATM   42  C   UNK     0      -4.809  -8.137   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      -2.799 -10.470   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0       4.270  -6.415   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0       3.265  -5.248   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0       3.773  -3.794   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   44                                                  
CONECT    6    5    7   24                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   22                                                  
CONECT    9    8   10   19                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   18                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   16                                                  
CONECT   14   13   15                                                       
CONECT   15   14                                                            
CONECT   16   13   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   11   19                                                  
CONECT   19   18    9   20                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21    8   23                                                  
CONECT   23   22   24                                                       
CONECT   24   23    6   25                                                  
CONECT   25   24   26                                                       
CONECT   26   25   27   44                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33   43                                                  
CONECT   33   32   34                                                       
CONECT   34   33   35   37                                                  
CONECT   35   34   36                                                       
CONECT   36   35                                                            
CONECT   37   34   38   40                                                  
CONECT   38   37   39                                                       
CONECT   39   38                                                            
CONECT   40   37   41   43                                                  
CONECT   41   40   42                                                       
CONECT   42   41                                                            
CONECT   43   40   32                                                       
CONECT   44   26    5   45                                                  
CONECT   45   44   46                                                       
CONECT   46   45                                                            
MASTER        0    0    0    0    0    0    0    0   46    0  102    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₅H₄₂N₂O₉

Average Mass

634.7260 Da

Monoisotopic Mass

634.28903 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

COC1C(CC2CN3CCC4=C(NC5=CC(OC)=CC=C45)C3CC2C1C(=O)OC)OC(=O)\C=C\C1=CC(OC)=C(OC)C(OC)=C1

InChI Identifier

InChI=1S/C35H42N2O9/c1-40-21-8-9-22-23-11-12-37-18-20-15-29(46-30(38)10-7-19-13-27(41-2)33(43-4)28(14-19)42-3)34(44-5)31(35(39)45-6)24(20)17-26(37)32(23)36-25(22)16-21/h7-10,13-14,16,20,24,26,29,31,34,36H,11-12,15,17-18H2,1-6H3/b10-7+

InChI Key

SZLZWPPUNLXJEA-JXMROGBWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Aspidosperma excelsum	LOTUS Database	35616633
Rauvolfia semperflorens	LOTUS Database	35616633
Rauvolfia serpentina	LOTUS Database	35616633
Vinca major	LOTUS Database	35616633
Vinca minor	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as yohimbine alkaloids. These are alkaloids containing the pentacyclic yohimban skeleton. The Yohimbinoid alkaloids contain a carbocyclic ring E arising through C-17 to C-18 bond formation in a corynantheine precursor.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Yohimbine alkaloids

Sub Class

Not Available

Direct Parent

Yohimbine alkaloids

Alternative Parents

Substituents

Yohimbine
Corynanthean skeleton
Yohimbine alkaloid
Pyridoindole
Beta-carboline
Cinnamic acid or derivatives
Coumaric acid or derivatives
Cinnamic acid ester
3-alkylindole
Indole or derivatives
Indole
Styrene
Methoxybenzene
Anisole
Phenoxy compound
Phenol ether
Fatty acid ester
Alkyl aryl ether
Aralkylamine
Dicarboxylic acid or derivatives
Benzenoid
Monocyclic benzene moiety
Piperidine
Fatty acyl
Heteroaromatic compound
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Methyl ester
Pyrrole
Tertiary amine
Amino acid or derivatives
Tertiary aliphatic amine
Carboxylic acid ester
Carboxylic acid derivative
Ether
Azacycle
Dialkyl ether
Organoheterocyclic compound
Organic oxygen compound
Carbonyl group
Organic oxide
Organopnictogen compound
Hydrocarbon derivative
Organic nitrogen compound
Amine
Organooxygen compound
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

4510261

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Rescinnamine

METLIN ID

Not Available

PubChem Compound

5353923

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate (NP0230690)

MOL for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

3D MOL for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

3D SDF for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

3D-SDF for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

PDB for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

3D PDB for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

SMILES for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

INCHI for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

Structure for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)

3D Structure for NP0230690 (methyl 6,18-dimethoxy-17-{[(2e)-3-(3,4,5-trimethoxyphenyl)prop-2-enoyl]oxy}-3,13-diazapentacyclo[11.8.0.0²,¹⁰.0⁴,⁹.0¹⁵,²⁰]henicosa-2(10),4,6,8-tetraene-19-carboxylate)