NP-MRD: Showing NP-Card for methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate (NP0229522)

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Record Information

Version

2.0

Created at

2022-09-06 09:37:33 UTC

Updated at

2022-09-06 09:37:33 UTC

NP-MRD ID

NP0229522

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate

Description

Methyl 9-{[(2E)-4-[(2S,3R,4R,5S)-3,4-dihydroxy-5-{[(2R,3R)-3-[(2R,3S)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate belongs to the class of organic compounds known as fatty alcohol esters. These are ester derivatives of a fatty alcohol. methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate is found in Pseudomonas fluorescens. Based on a literature review very few articles have been published on methyl 9-{[(2E)-4-[(2S,3R,4R,5S)-3,4-dihydroxy-5-{[(2R,3R)-3-[(2R,3S)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309062211372D          

 36 37  0  0  1  0            999 V2000
    4.2868   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0039   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7184   -9.0750    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   16.4328   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.1473   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1473   -9.9000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   17.8618  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.5762   -9.9000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   18.9887   -9.1855    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.4012   -9.9000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   20.1157  -10.3125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   20.8302   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.1157  -11.1375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   20.8302  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.4012  -11.5500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.4328  -10.3125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   16.4328  -11.1375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.7184   -9.9000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   15.0039  -10.3125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 17 19  1  0  0  0  0
 20 19  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  6  0  0  0
 25 24  1  1  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  6  0  0  0
 28 29  1  6  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 30 32  1  6  0  0  0
 23 33  1  0  0  0  0
 33 34  1  1  0  0  0
 33 35  1  0  0  0  0
 20 35  1  0  0  0  0
 35 36  1  1  0  0  0
M  END

     RDKit          3D

 82 83  0  0  0  0  0  0  0  0999 V2000
   10.9059    0.5909    2.2190 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1253   -0.4336    1.5950 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.4551   -0.9731    0.3698 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4752   -0.5583   -0.2283 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.6285   -2.0247   -0.2447 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1830   -1.6926   -1.6300 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4157   -0.4623   -1.8562 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1094   -0.2259   -1.2300 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0004   -0.1539    0.2371 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5436    0.1137    0.7140 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0494    1.4037    0.1880 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6968    1.8678    0.6209 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6673    1.0324    0.3255 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2754   -0.1756    0.8055 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9348   -0.6910    1.7288 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0992   -0.8565    0.2438 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3643   -0.3569   -0.7274 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7243    0.9593   -1.2972 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7993   -1.1304   -1.2206 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0501   -0.3007   -1.0101 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1704   -0.0473    0.3583 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4235   -0.3446    0.8372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5343    0.3869    0.0624 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.8103    0.1130    0.7734 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0156    0.7611    0.1724 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.3162    0.4044   -1.1385 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1796   -0.1259   -0.1801 C   0  0  2  0  0  0  0  0  0  0  0  0
   -9.5901    0.3848   -0.1262 C   0  0  2  0  0  0  0  0  0  0  0  0
   -9.8323    1.5489   -1.0485 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0019    0.6414    1.2947 C   0  0  2  0  0  0  0  0  0  0  0  0
   -9.9027   -0.6800    2.0419 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.2532    1.2184    1.3983 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4479   -0.0514   -1.3560 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.0655    1.0536   -2.1565 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2829   -1.0462   -1.4742 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.1412   -1.2801   -2.8482 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.5637    0.6632    3.2810 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.9760    0.2750    2.2634 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.7606    1.5655    1.7392 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9109   -2.4473    0.4400 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.3428   -2.9456   -0.4156 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0952   -1.7513   -2.2898 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5166   -2.5620   -1.9601 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1328    0.4067   -1.6942 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2363   -0.3845   -2.9897 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3888   -0.9982   -1.6519 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7122    0.7399   -1.6624 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5753    0.6592    0.7005 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2366   -1.1357    0.7260 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9958   -0.7489    0.2514 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5309    0.0087    1.8023 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7785    2.2014    0.5169 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0523    1.3953   -0.9526 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4871    2.8512    0.0780 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7200    2.1548    1.7184 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8417   -1.8231    0.6684 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0165    1.2621   -2.1116 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7248    0.9393   -1.8146 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6529    1.7757   -0.5537 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9335   -2.0827   -0.7066 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6771   -1.3846   -2.3146 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0257    0.6455   -1.5869 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6443   -1.4145    0.9730 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4898    0.0873    1.8788 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3013    1.4759    0.1523 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7052    0.5285    1.8178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9523   -0.9918    0.9117 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3451    1.7596    0.5474 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0521   -1.1860    0.1134 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2244   -0.4578   -0.5458 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.9245    1.5414   -1.2855 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6351    2.5304   -0.5751 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1970    1.3820   -1.9439 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2739    1.3259    1.7743 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8253   -0.9062    2.1754 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3967   -0.6353    3.0167 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3206   -1.4825    1.3848 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5855    0.9907    2.3231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3530   -0.5065   -1.7875 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8322    1.6780   -2.2311 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4747   -1.9894   -0.9554 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9156   -1.8784   -3.0968 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
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 17 18  1  0
 17 19  1  0
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 21 22  1  0
 22 23  1  0
 23 24  1  0
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 25 26  1  0
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 28 29  1  0
 28 30  1  0
 30 31  1  0
 30 32  1  0
 23 33  1  0
 33 34  1  0
 33 35  1  0
 35 36  1  0
 35 20  1  0
 27 25  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  5 40  1  0
  5 41  1  0
  6 42  1  0
  6 43  1  0
  7 44  1  0
  7 45  1  0
  8 46  1  0
  8 47  1  0
  9 48  1  0
  9 49  1  0
 10 50  1  0
 10 51  1  0
 11 52  1  0
 11 53  1  0
 12 54  1  0
 12 55  1  0
 16 56  1  0
 18 57  1  0
 18 58  1  0
 18 59  1  0
 19 60  1  0
 19 61  1  0
 20 62  1  6
 22 63  1  0
 22 64  1  0
 23 65  1  6
 24 66  1  0
 24 67  1  0
 25 68  1  6
 27 69  1  1
 28 70  1  6
 29 71  1  0
 29 72  1  0
 29 73  1  0
 30 74  1  1
 31 75  1  0
 31 76  1  0
 31 77  1  0
 32 78  1  0
 33 79  1  6
 34 80  1  0
 35 81  1  1
 36 82  1  0
M  END


  Mrv1652309062211372D          

 36 37  0  0  1  0            999 V2000
    4.2868   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0039   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7184   -9.0750    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   16.4328   -8.6625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.1473   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1473   -9.9000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   17.8618  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.5762   -9.9000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   18.9887   -9.1855    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.4012   -9.9000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   20.1157  -10.3125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   20.8302   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.1157  -11.1375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   20.8302  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.4012  -11.5500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.4328  -10.3125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   16.4328  -11.1375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.7184   -9.9000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   15.0039  -10.3125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 17 19  1  0  0  0  0
 20 19  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  6  0  0  0
 25 24  1  1  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  6  0  0  0
 28 29  1  6  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 30 32  1  6  0  0  0
 23 33  1  0  0  0  0
 33 34  1  1  0  0  0
 33 35  1  0  0  0  0
 20 35  1  0  0  0  0
 35 36  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0229522

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)CCCCCCCCOC(=O)\C=C(/C)C[C@@H]1OC[C@H](C[C@H]2O[C@@H]2[C@H](C)[C@H](C)O)[C@@H](O)[C@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C27H46O9/c1-17(14-24(30)34-12-10-8-6-5-7-9-11-23(29)33-4)13-21-26(32)25(31)20(16-35-21)15-22-27(36-22)18(2)19(3)28/h14,18-22,25-28,31-32H,5-13,15-16H2,1-4H3/b17-14+/t18-,19+,20+,21+,22-,25-,26+,27-/m1/s1

> <INCHI_KEY>
CJKAHSOGVKAYJX-IWCNIMKTSA-N

> <FORMULA>
C27H46O9

> <MOLECULAR_WEIGHT>
514.656

> <EXACT_MASS>
514.314183061

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
82

> <JCHEM_AVERAGE_POLARIZABILITY>
58.058575355774146

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
methyl 9-{[(2E)-4-[(2S,3R,4R,5S)-3,4-dihydroxy-5-{[(2R,3R)-3-[(2R,3S)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate

> <JCHEM_LOGP>
2.5972197316666663

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.601753583494116

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.104769925722348

> <JCHEM_PKA_STRONGEST_BASIC>
-2.71476683945935

> <JCHEM_POLAR_SURFACE_AREA>
135.05

> <JCHEM_REFRACTIVITY>
134.16320000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
18

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
methyl 9-{[(2E)-4-[(2S,3R,4R,5S)-3,4-dihydroxy-5-{[(2R,3R)-3-[(2R,3S)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  C   UNK     0       8.002 -16.940   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       9.336 -16.170   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      10.669 -16.940   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      10.669 -18.480   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      12.003 -16.170   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      13.337 -16.940   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      14.670 -16.170   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      16.004 -16.940   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      17.338 -16.170   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      18.672 -16.940   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      20.005 -16.170   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      21.339 -16.940   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      22.673 -16.170   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0      24.006 -16.940   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      24.006 -18.480   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      25.340 -16.170   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      26.674 -16.940   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      26.674 -18.480   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      28.007 -16.170   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      29.341 -16.940   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      30.675 -16.170   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0      32.008 -16.940   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      32.008 -18.480   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      33.342 -19.250   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      34.676 -18.480   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      35.446 -17.146   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      36.216 -18.480   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      37.549 -19.250   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      38.883 -18.480   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      37.549 -20.790   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      38.883 -21.560   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      36.216 -21.560   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0      30.675 -19.250   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      30.675 -20.790   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      29.341 -18.480   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      28.007 -19.250   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20                                                       
CONECT   20   19   21   35                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   33                                                  
CONECT   24   23   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25   27                                                       
CONECT   27   26   25   28                                                  
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30                                                            
CONECT   33   23   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   20   36                                                  
CONECT   36   35                                                            
MASTER        0    0    0    0    0    0    0    0   36    0   74    0
END

View in JSmol

Synonyms

Value	Source
Methyl 9-{[(2E)-4-[(2S,3R,4R,5S)-3,4-dihydroxy-5-{[(2R,3R)-3-[(2R,3S)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoic acid	Generator

Chemical Formula

C₂₇H₄₆O₉

Average Mass

514.6560 Da

Monoisotopic Mass

514.31418 Da

IUPAC Name

methyl 9-{[(2E)-4-[(2S,3R,4R,5S)-3,4-dihydroxy-5-{[(2R,3R)-3-[(2R,3S)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate

Traditional Name

methyl 9-{[(2E)-4-[(2S,3R,4R,5S)-3,4-dihydroxy-5-{[(2R,3R)-3-[(2R,3S)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate

CAS Registry Number

Not Available

SMILES

COC(=O)CCCCCCCCOC(=O)\C=C(/C)C[C@@H]1OC[C@H](C[C@H]2O[C@@H]2[C@H](C)[C@H](C)O)[C@@H](O)[C@H]1O

InChI Identifier

InChI=1S/C27H46O9/c1-17(14-24(30)34-12-10-8-6-5-7-9-11-23(29)33-4)13-21-26(32)25(31)20(16-35-21)15-22-27(36-22)18(2)19(3)28/h14,18-22,25-28,31-32H,5-13,15-16H2,1-4H3/b17-14+/t18-,19+,20+,21+,22-,25-,26+,27-/m1/s1

InChI Key

CJKAHSOGVKAYJX-IWCNIMKTSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Pseudomonas fluorescens	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as fatty alcohol esters. These are ester derivatives of a fatty alcohol.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty alcohol esters

Direct Parent

Fatty alcohol esters

Alternative Parents

Substituents

Fatty alcohol ester
Fatty acid ester
Fatty acid methyl ester
Dicarboxylic acid or derivatives
Monosaccharide
Oxane
Methyl ester
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Secondary alcohol
Carboxylic acid ester
Organoheterocyclic compound
Oxacycle
Ether
Oxirane
Dialkyl ether
Carboxylic acid derivative
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Carbonyl group
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.6	ChemAxon
pKa (Strongest Acidic)	13.1	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	135.05 Å²	ChemAxon
Rotatable Bond Count	18	ChemAxon
Refractivity	134.16 m³·mol⁻¹	ChemAxon
Polarizability	58.06 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162924610

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate (NP0229522)

MOL for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

3D MOL for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

3D SDF for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

3D-SDF for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

PDB for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

3D PDB for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

SMILES for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

INCHI for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

Structure for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)

3D Structure for NP0229522 (methyl 9-{[(2e)-4-[(2s,3r,4r,5s)-3,4-dihydroxy-5-{[(2r,3r)-3-[(2r,3s)-3-hydroxybutan-2-yl]oxiran-2-yl]methyl}oxan-2-yl]-3-methylbut-2-enoyl]oxy}nonanoate)