NP-MRD: Showing NP-Card for (2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane (NP0228964)

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Record Information

Version

2.0

Created at

2022-09-06 08:49:56 UTC

Updated at

2022-09-06 08:49:56 UTC

NP-MRD ID

NP0228964

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane

Description

Galbelgin, also known as veraguensin or galgravin, belongs to the class of organic compounds known as 7,7'-epoxylignans. These are lignans with a structure based on a 2,5-diaryl-3, 4-dimethyltetrahydrofuran skeleton. (2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane is found in Machilus thunbergii, Magnolia denudata, Piper kadsura and Virola surinamensis. (2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane was first documented in 2010 (PMID: 20394289). Based on a literature review a small amount of articles have been published on Galbelgin (PMID: 21749139) (PMID: 34443392) (PMID: 28641835) (PMID: 32927887).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309062210492D          

 27 29  0  0  1  0            999 V2000
    0.0000    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3819   -1.7224    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -2.5070    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6119   -3.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4324   -3.0882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9173   -3.7557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5817   -4.5094    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0667   -5.1768    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8871   -5.0906    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7613   -4.5956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4257   -5.3493    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6052   -5.4355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2763   -3.9282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020   -2.5070    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1830   -3.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0470   -1.7224    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7376   -1.4675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 13 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 16 19  2  0  0  0  0
 10 19  1  0  0  0  0
  9 20  1  0  0  0  0
 20 21  1  1  0  0  0
 20 22  1  0  0  0  0
  7 22  1  0  0  0  0
 22 23  1  6  0  0  0
  6 24  1  0  0  0  0
 24 25  2  0  0  0  0
  3 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END

     RDKit          3D

 55 57  0  0  0  0  0  0  0  0999 V2000
   -6.7996    1.6727   -0.7862 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8867    0.8196   -1.4639 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7476    0.4122   -0.7820 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4977    0.8134    0.5106 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3538    0.4148    1.2150 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4797   -0.4027    0.5560 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2262   -0.8697    1.1882 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2608   -0.8733    0.1886 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6123    0.1721    0.4174 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9498   -0.0394   -0.1317 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1282   -0.5478   -1.4280 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3952   -0.7353   -1.9293 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5221   -0.4374   -1.1937 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8162   -0.6290   -1.7066 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8975   -1.1550   -3.0415 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3375    0.0602    0.0760 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4736    0.3753    0.8542 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2700    0.8923    2.1672 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0742    0.2528    0.5898 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6270    0.4591    1.8666 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7584    1.9545    2.1331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7453   -0.0324    2.3032 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6004   -0.9214    3.5422 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7445   -0.8085   -0.7653 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8662   -0.4157   -1.4517 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1032   -0.8315   -2.7575 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1591   -1.6776   -3.3823 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0878    1.2287    0.1877 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2182    2.6112   -0.5551 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6941    1.8716   -1.4120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1786    1.4619    1.0456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2078    0.7492    2.2323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3838   -1.9340    1.4752 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1671    1.0598   -0.1178 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2201   -0.7746   -1.9872 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4991   -1.1294   -2.9316 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2945   -2.0884   -3.0719 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9265   -1.3907   -3.3295 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4446   -0.4554   -3.7652 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7726    1.8861    2.1464 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2420    1.0560    2.6746 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6989    0.1586    2.7816 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0145    0.6558    1.6167 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3696   -0.0895    2.4707 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4477    2.4361    1.4290 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2404    2.4465    1.9724 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0651    2.1603    3.1645 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3114    0.8659    2.5538 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1504   -0.4859    4.2417 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1775   -1.8799    3.1778 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5591   -1.1336    4.0106 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0281   -1.4645   -1.2668 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3654   -1.8305   -4.4462 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1308   -1.2487   -3.2882 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1207   -2.6651   -2.8621 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6 24  1  0
 24 25  2  0
 25 26  1  0
 26 27  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  1  0
 13 16  1  0
 16 17  1  0
 17 18  1  0
 16 19  2  0
 25  3  1  0
 22  7  1  0
 19 10  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  4 31  1  0
  5 32  1  0
 24 52  1  0
 27 53  1  0
 27 54  1  0
 27 55  1  0
  7 33  1  1
  9 34  1  6
 20 44  1  1
 21 45  1  0
 21 46  1  0
 21 47  1  0
 22 48  1  1
 23 49  1  0
 23 50  1  0
 23 51  1  0
 11 35  1  0
 12 36  1  0
 15 37  1  0
 15 38  1  0
 15 39  1  0
 18 40  1  0
 18 41  1  0
 18 42  1  0
 19 43  1  0
M  END


  Mrv1652309062210492D          

 27 29  0  0  1  0            999 V2000
    0.0000    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3819   -1.7224    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -2.5070    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6119   -3.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4324   -3.0882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9173   -3.7557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5817   -4.5094    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0667   -5.1768    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8871   -5.0906    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7613   -4.5956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4257   -5.3493    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6052   -5.4355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2763   -3.9282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020   -2.5070    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1830   -3.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0470   -1.7224    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7376   -1.4675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 13 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 16 19  2  0  0  0  0
 10 19  1  0  0  0  0
  9 20  1  0  0  0  0
 20 21  1  1  0  0  0
 20 22  1  0  0  0  0
  7 22  1  0  0  0  0
 22 23  1  6  0  0  0
  6 24  1  0  0  0  0
 24 25  2  0  0  0  0
  3 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0228964

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC=C(C=C1OC)[C@H]1O[C@@H]([C@@H](C)[C@@H]1C)C1=CC=C(OC)C(OC)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C22H28O5/c1-13-14(2)22(16-8-10-18(24-4)20(12-16)26-6)27-21(13)15-7-9-17(23-3)19(11-15)25-5/h7-14,21-22H,1-6H3/t13-,14-,21-,22-/m0/s1

> <INCHI_KEY>
JLJAVUZBHSLLJL-WJWAULOUSA-N

> <FORMULA>
C22H28O5

> <MOLECULAR_WEIGHT>
372.461

> <EXACT_MASS>
372.193674002

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
55

> <JCHEM_AVERAGE_POLARIZABILITY>
41.92327696999672

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2S,3S,4S,5S)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane

> <JCHEM_LOGP>
4.198087866333333

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-3.960844812019674

> <JCHEM_POLAR_SURFACE_AREA>
46.150000000000006

> <JCHEM_REFRACTIVITY>
103.91510000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2S,3S,4S,5S)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  C   UNK     0       0.000   4.620   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       1.334   3.850   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       2.580  -3.215   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       2.104  -4.680   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.009  -5.926   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.540  -5.765   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.446  -7.011   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.819  -8.417   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       5.724  -9.663   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       7.256  -9.502   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.288  -8.578   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       2.661  -9.985   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       1.130 -10.146   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.382  -7.333   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.564  -4.680   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -0.342  -5.926   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.088  -3.215   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.377  -2.739   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       0.000  -0.000   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -1.334   2.310   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -1.334   3.850   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   25                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   24                                                  
CONECT    7    6    8   22                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   20                                                  
CONECT   10    9   11   19                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   16                                                  
CONECT   14   13   15                                                       
CONECT   15   14                                                            
CONECT   16   13   17   19                                                  
CONECT   17   16   18                                                       
CONECT   18   17                                                            
CONECT   19   16   10                                                       
CONECT   20    9   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20    7   23                                                  
CONECT   23   22                                                            
CONECT   24    6   25                                                       
CONECT   25   24    3   26                                                  
CONECT   26   25   27                                                       
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   58    0
END

View in JSmol

Synonyms

Value	Source
Galgravin, (2R-(2alpha,3alpha,4beta,5alpha))-isomer	MeSH
Galgravin, (2S-(2alpha,3beta,4alpha,5beta))-isomer	MeSH
Galgravin, (2alpha,3alpha,4alpha,5beta)-isomer	MeSH
Galgravin, (2alpha,3alpha,4beta,5beta)-(+)-isomer	MeSH
Galgravin, (2alpha,3beta,4alpha,5beta)-isomer	MeSH
Galgravin, (2alpha,3alpha,4beta,5alpha)-isomer	MeSH
Galgravin, (2alpha,3alpha,4alpha,5alpha)-isomer	MeSH
Veraguensin	MeSH
Galgravin	MeSH
Galgravin, (2alpha,3alpha,4alpha,5beta)-(+-)-isomer	MeSH

Chemical Formula

C₂₂H₂₈O₅

Average Mass

372.4610 Da

Monoisotopic Mass

372.19367 Da

IUPAC Name

(2S,3S,4S,5S)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane

Traditional Name

(2S,3S,4S,5S)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane

CAS Registry Number

Not Available

SMILES

COC1=CC=C(C=C1OC)[C@H]1O[C@@H]([C@@H](C)[C@@H]1C)C1=CC=C(OC)C(OC)=C1

InChI Identifier

InChI=1S/C22H28O5/c1-13-14(2)22(16-8-10-18(24-4)20(12-16)26-6)27-21(13)15-7-9-17(23-3)19(11-15)25-5/h7-14,21-22H,1-6H3/t13-,14-,21-,22-/m0/s1

InChI Key

JLJAVUZBHSLLJL-WJWAULOUSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Machilus thunbergii	LOTUS Database	35616633
Magnolia denudata	LOTUS Database	35616633
Piper kadsura	LOTUS Database	35616633
Virola surinamensis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 7,7'-epoxylignans. These are lignans with a structure based on a 2,5-diaryl-3, 4-dimethyltetrahydrofuran skeleton.

Kingdom

Organic compounds

Super Class

Lignans, neolignans and related compounds

Class

Furanoid lignans

Sub Class

Tetrahydrofuran lignans

Direct Parent

7,7'-epoxylignans

Alternative Parents

Substituents

7,7p-epoxylignan
Dibenzylbutane lignan skeleton
Dimethoxybenzene
O-dimethoxybenzene
Anisole
Phenol ether
Phenoxy compound
Methoxybenzene
Alkyl aryl ether
Benzenoid
Monocyclic benzene moiety
Oxolane
Ether
Dialkyl ether
Organoheterocyclic compound
Oxacycle
Organic oxygen compound
Organooxygen compound
Hydrocarbon derivative
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.2	ChemAxon
pKa (Strongest Basic)	-4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	46.15 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	103.92 m³·mol⁻¹	ChemAxon
Polarizability	41.92 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00031801

Chemspider ID

10148730

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11975378

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Rye CE, Barker D: Asymmetric synthesis of (+)-galbelgin, (-)-kadangustin J, (-)-cyclogalgravin and (-)-pycnanthulignenes A and B, three structurally distinct lignan classes, using a common chiral precursor. J Org Chem. 2011 Aug 19;76(16):6636-48. doi: 10.1021/jo200968f. Epub 2011 Jul 22. [PubMed:21749139 ]
Duan S, Zhang P, Yu P: [Neolignans and lignan from Piper wallichii]. Zhongguo Zhong Yao Za Zhi. 2010 Jan;35(2):180-2. doi: 10.4268/cjcmm20100213. [PubMed:20394289 ]
Shin H, Han YK, Byun Y, Jeon YH, Lee KY: Lignans from Machilus thunbergii as Thymic Stromal Lymphopoietin Inhibitors. Molecules. 2021 Aug 8;26(16). pii: molecules26164804. doi: 10.3390/molecules26164804. [PubMed:34443392 ]
Xin H, Dai Z, Cai J, Ke Y, Shi H, Fu Q, Jin Y, Liang X: Rapid purification of diastereoisomers from Piper kadsura using supercritical fluid chromatography with chiral stationary phases. J Chromatogr A. 2017 Aug 4;1509:141-146. doi: 10.1016/j.chroma.2017.06.020. Epub 2017 Jun 12. [PubMed:28641835 ]
Li SL, Wu HC, Hwang TL, Lin CH, Yang SS, Chang HS: Phytochemical Investigation and Anti-Inflammatory Activity of the Leaves of Machilus japonica var. kusanoi. Molecules. 2020 Sep 10;25(18):4149. doi: 10.3390/molecules25184149. [PubMed:32927887 ]
LOTUS database [Link]

Showing NP-Card for (2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane (NP0228964)

MOL for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

3D MOL for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

3D SDF for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

3D-SDF for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

PDB for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

3D PDB for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

SMILES for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

INCHI for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

Structure for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)

3D Structure for NP0228964 ((2s,3s,4s,5s)-2,5-bis(3,4-dimethoxyphenyl)-3,4-dimethyloxolane)