NP-MRD: Showing NP-Card for (1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate (NP0227139)

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Record Information

Version

1.0

Created at

2022-09-06 06:22:36 UTC

Updated at

2022-09-06 06:22:36 UTC

NP-MRD ID

NP0227139

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate

Description

(2R,3R,3aR,4R,6S,7S,8S,12S,13aR)-6,7,8-tris(acetyloxy)-3,13a-dihydroxy-2,9,9,12-tetramethyl-4-{[(2R)-2-methylbutanoyl]oxy}-5-methylidene-13-oxo-1H,2H,3H,3aH,4H,5H,6H,7H,8H,9H,12H,13H,13aH-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate belongs to the class of organic compounds known as jatrophane and cyclojatrophane diterpenoids. These are diterpenoids with a structure based on the jatrophane or the 9,13-jatrophane skeleton. Jatrophane can be derived from casbane by 6,10-cyclization and opening of the cyclopropane. Cyclojatrophane diterpenoids are based on the 9,13-cyclization of the jatrophane skeleton yields the 9,13-cyclojatrophane skeleton. (1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate is found in Euphorbia lamarckii. Based on a literature review very few articles have been published on (2R,3R,3aR,4R,6S,7S,8S,12S,13aR)-6,7,8-tris(acetyloxy)-3,13a-dihydroxy-2,9,9,12-tetramethyl-4-{[(2R)-2-methylbutanoyl]oxy}-5-methylidene-13-oxo-1H,2H,3H,3aH,4H,5H,6H,7H,8H,9H,12H,13H,13aH-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652309062208222D          

 51 53  0  0  1  0            999 V2000
    0.6115   -2.8739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1990   -3.5884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -4.1718    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4968   -3.7593    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2113   -4.1718    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9258   -3.7593    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2113   -4.9968    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9959   -4.9687    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8209   -4.9687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2334   -5.6831    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8209   -6.3976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0584   -5.6831    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -5.7656    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4968   -6.1781    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4968   -7.0031    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -7.4156    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2113   -7.4156    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1990   -6.3489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1497   -7.0966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8748   -6.8221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5979   -6.1354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3948   -6.3489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9782   -5.7656    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6926   -6.1781    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1917   -4.9687    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0167   -4.9687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9782   -4.1718    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7318   -4.5073    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7132   -3.7972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5842   -2.9824    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.6274   -2.1585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4081   -2.9392    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7826   -2.2041    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3333   -1.5122    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6065   -2.1610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0558   -2.8529    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8797   -2.8097    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2542   -2.0746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8049   -1.3827    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9810   -1.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7693   -2.8533    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3948   -2.1183    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3948   -3.5884    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5979   -3.3749    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5979   -2.5499    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1166   -2.1374    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1166   -1.3124    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8310   -2.5499    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8310   -3.3749    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5455   -2.1374    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5455   -1.3124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  6  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  5  7  2  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  2  0  0  0  0
  8 13  1  0  0  0  0
 13 14  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  2  0  0  0  0
 13 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 18 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  6  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  6  0  0  0
 30 32  1  1  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
 33 35  1  0  0  0  0
 35 36  2  0  0  0  0
 36 37  1  0  0  0  0
 37 38  2  0  0  0  0
 38 39  1  0  0  0  0
 39 40  2  0  0  0  0
 35 40  1  0  0  0  0
 30 41  1  0  0  0  0
 41 42  1  6  0  0  0
 43 41  1  6  0  0  0
 27 43  1  0  0  0  0
 43 44  1  0  0  0  0
  2 44  1  0  0  0  0
 44 45  1  1  0  0  0
 45 46  1  0  0  0  0
 46 47  2  0  0  0  0
 46 48  1  0  0  0  0
 48 49  1  1  0  0  0
 48 50  1  0  0  0  0
 50 51  1  0  0  0  0
M  END


  Mrv1652309062208222D          

 51 53  0  0  1  0            999 V2000
    0.6115   -2.8739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1990   -3.5884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -4.1718    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4968   -3.7593    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2113   -4.1718    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9258   -3.7593    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2113   -4.9968    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9959   -4.9687    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8209   -4.9687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2334   -5.6831    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8209   -6.3976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0584   -5.6831    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -5.7656    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4968   -6.1781    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4968   -7.0031    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7823   -7.4156    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2113   -7.4156    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1990   -6.3489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1497   -7.0966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8748   -6.8221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5979   -6.1354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3948   -6.3489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9782   -5.7656    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6926   -6.1781    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1917   -4.9687    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0167   -4.9687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9782   -4.1718    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7318   -4.5073    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7132   -3.7972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5842   -2.9824    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.6274   -2.1585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4081   -2.9392    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7826   -2.2041    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3333   -1.5122    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6065   -2.1610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0558   -2.8529    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8797   -2.8097    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2542   -2.0746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8049   -1.3827    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9810   -1.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7693   -2.8533    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3948   -2.1183    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3948   -3.5884    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5979   -3.3749    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5979   -2.5499    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1166   -2.1374    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1166   -1.3124    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8310   -2.5499    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8310   -3.3749    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5455   -2.1374    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5455   -1.3124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  6  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  5  7  2  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  2  0  0  0  0
  8 13  1  0  0  0  0
 13 14  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  2  0  0  0  0
 13 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 18 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  6  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  6  0  0  0
 30 32  1  1  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
 33 35  1  0  0  0  0
 35 36  2  0  0  0  0
 36 37  1  0  0  0  0
 37 38  2  0  0  0  0
 38 39  1  0  0  0  0
 39 40  2  0  0  0  0
 35 40  1  0  0  0  0
 30 41  1  0  0  0  0
 41 42  1  6  0  0  0
 43 41  1  6  0  0  0
 27 43  1  0  0  0  0
 43 44  1  0  0  0  0
  2 44  1  0  0  0  0
 44 45  1  1  0  0  0
 45 46  1  0  0  0  0
 46 47  2  0  0  0  0
 46 48  1  0  0  0  0
 48 49  1  1  0  0  0
 48 50  1  0  0  0  0
 50 51  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0227139

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC[C@@H](C)C(=O)O[C@@H]1[C@H]2[C@@H](O)[C@@](C)(C[C@]2(O)C(=O)[C@@H](C)\C=C\C(C)(C)[C@H](OC(C)=O)[C@H](OC(C)=O)[C@@H](OC(C)=O)C1=C)OC(=O)C1=CC=CN=C1

> <INCHI_IDENTIFIER>
InChI=1S/C37H49NO13/c1-11-19(2)33(44)50-27-21(4)28(47-22(5)39)29(48-23(6)40)32(49-24(7)41)35(8,9)15-14-20(3)30(42)37(46)18-36(10,31(43)26(27)37)51-34(45)25-13-12-16-38-17-25/h12-17,19-20,26-29,31-32,43,46H,4,11,18H2,1-3,5-10H3/b15-14+/t19-,20+,26+,27+,28+,29-,31-,32-,36-,37-/m1/s1

> <INCHI_KEY>
LOFYLMVVNBTSKH-ZQCZKMAKSA-N

> <FORMULA>
C37H49NO13

> <MOLECULAR_WEIGHT>
715.793

> <EXACT_MASS>
715.320390642

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
100

> <JCHEM_AVERAGE_POLARIZABILITY>
73.10682317004526

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R,3R,3aR,4R,6S,7S,8S,12S,13aR)-6,7,8-tris(acetyloxy)-3,13a-dihydroxy-2,9,9,12-tetramethyl-4-{[(2R)-2-methylbutanoyl]oxy}-5-methylidene-13-oxo-1H,2H,3H,3aH,4H,5H,6H,7H,8H,9H,12H,13H,13aH-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate

> <JCHEM_LOGP>
3.1720740336666657

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.602228916084393

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.482496095536156

> <JCHEM_PKA_STRONGEST_BASIC>
3.2383294140480987

> <JCHEM_POLAR_SURFACE_AREA>
201.91999999999996

> <JCHEM_REFRACTIVITY>
179.13270000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
13

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,3aR,5S,9S,10S,11S,13R,13aR)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2R)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1H,3H,5H,9H,10H,11H,13H,13aH-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  C   UNK     0       1.141  -5.365   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.371  -6.698   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.460  -7.787   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       2.794  -7.017   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       4.128  -7.787   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.461  -7.017   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       4.128  -9.327   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       1.859  -9.275   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       3.399  -9.275   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       4.169 -10.609   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.399 -11.942   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       5.709 -10.609   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       1.460 -10.762   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.794 -11.532   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       2.794 -13.072   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.460 -13.842   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       4.128 -13.842   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       0.371 -11.851   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.279 -13.247   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.633 -12.735   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.116 -11.453   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -2.604 -11.851   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.693 -10.762   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -5.026 -11.532   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -4.091  -9.275   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -5.631  -9.275   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -3.693  -7.787   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      -5.099  -8.414   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0      -5.065  -7.088   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -4.824  -5.567   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -4.904  -4.029   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      -6.362  -5.487   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0      -7.061  -4.114   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      -6.222  -2.823   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      -8.599  -4.034   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      -9.437  -5.325   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0     -10.975  -5.245   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0     -11.675  -3.873   0.000  0.00  0.00           C+0
HETATM   39  N   UNK     0     -10.836  -2.581   0.000  0.00  0.00           N+0
HETATM   40  C   UNK     0      -9.298  -2.662   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      -3.303  -5.326   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0      -2.604  -3.954   0.000  0.00  0.00           O+0
HETATM   43  C   UNK     0      -2.604  -6.698   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      -1.116  -6.300   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0      -1.116  -4.760   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0       0.218  -3.990   0.000  0.00  0.00           C+0
HETATM   47  O   UNK     0       0.218  -2.450   0.000  0.00  0.00           O+0
HETATM   48  C   UNK     0       1.551  -4.760   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0       1.551  -6.300   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0       2.885  -3.990   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0       2.885  -2.450   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   44                                                  
CONECT    3    2    4    8                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5                                                            
CONECT    8    3    9   13                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10                                                            
CONECT   13    8   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15                                                            
CONECT   18   13   19   20   21                                             
CONECT   19   18                                                            
CONECT   20   18                                                            
CONECT   21   18   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   29   43                                             
CONECT   28   27                                                            
CONECT   29   27   30                                                       
CONECT   30   29   31   32   41                                             
CONECT   31   30                                                            
CONECT   32   30   33                                                       
CONECT   33   32   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   36   40                                                  
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   35                                                       
CONECT   41   30   42   43                                                  
CONECT   42   41                                                            
CONECT   43   41   27   44                                                  
CONECT   44   43    2   45                                                  
CONECT   45   44   46                                                       
CONECT   46   45   47   48                                                  
CONECT   47   46                                                            
CONECT   48   46   49   50                                                  
CONECT   49   48                                                            
CONECT   50   48   51                                                       
CONECT   51   50                                                            
MASTER        0    0    0    0    0    0    0    0   51    0  106    0
END

View in JSmol

Synonyms

Value	Source
(2R,3R,3AR,4R,6S,7S,8S,12S,13ar)-6,7,8-tris(acetyloxy)-3,13a-dihydroxy-2,9,9,12-tetramethyl-4-{[(2R)-2-methylbutanoyl]oxy}-5-methylidene-13-oxo-1H,2H,3H,3ah,4H,5H,6H,7H,8H,9H,12H,13H,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylic acid	Generator

Chemical Formula

C₃₇H₄₉NO₁₃

Average Mass

715.7930 Da

Monoisotopic Mass

715.32039 Da

IUPAC Name

Traditional Name

(1R,2R,3aR,5S,9S,10S,11S,13R,13aR)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2R)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1H,3H,5H,9H,10H,11H,13H,13aH-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate

CAS Registry Number

Not Available

SMILES

CC[C@@H](C)C(=O)O[C@@H]1[C@H]2[C@@H](O)[C@@](C)(C[C@]2(O)C(=O)[C@@H](C)\C=C\C(C)(C)[C@H](OC(C)=O)[C@H](OC(C)=O)[C@@H](OC(C)=O)C1=C)OC(=O)C1=CC=CN=C1

InChI Identifier

InChI=1S/C37H49NO13/c1-11-19(2)33(44)50-27-21(4)28(47-22(5)39)29(48-23(6)40)32(49-24(7)41)35(8,9)15-14-20(3)30(42)37(46)18-36(10,31(43)26(27)37)51-34(45)25-13-12-16-38-17-25/h12-17,19-20,26-29,31-32,43,46H,4,11,18H2,1-3,5-10H3/b15-14+/t19-,20+,26+,27+,28+,29-,31-,32-,36-,37-/m1/s1

InChI Key

LOFYLMVVNBTSKH-ZQCZKMAKSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Euphorbia lamarckii	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as jatrophane and cyclojatrophane diterpenoids. These are diterpenoids with a structure based on the jatrophane or the 9,13-jatrophane skeleton. Jatrophane can be derived from casbane by 6,10-cyclization and opening of the cyclopropane. Cyclojatrophane diterpenoids are based on the 9,13-cyclization of the jatrophane skeleton yields the 9,13-cyclojatrophane skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Jatrophane and cyclojatrophane diterpenoids

Alternative Parents

Substituents

Jatrophane diterpenoid
Pentacarboxylic acid or derivatives
Pyridine carboxylic acid
Pyridine carboxylic acid or derivatives
Fatty acid ester
Fatty acyl
Pyridine
Heteroaromatic compound
Cyclic alcohol
Tertiary alcohol
Carboxylic acid ester
Ketone
Secondary alcohol
Azacycle
Carboxylic acid derivative
Organoheterocyclic compound
Organopnictogen compound
Organic oxygen compound
Organooxygen compound
Organonitrogen compound
Organic nitrogen compound
Alcohol
Hydrocarbon derivative
Organic oxide
Carbonyl group
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.17	ChemAxon
pKa (Strongest Acidic)	12.48	ChemAxon
pKa (Strongest Basic)	3.24	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	201.92 Å²	ChemAxon
Rotatable Bond Count	13	ChemAxon
Refractivity	179.13 m³·mol⁻¹	ChemAxon
Polarizability	73.11 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163193244

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate (NP0227139)

MOL for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

3D MOL for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

3D SDF for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

3D-SDF for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

PDB for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

3D PDB for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

SMILES for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

INCHI for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

Structure for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)

3D Structure for NP0227139 ((1r,2r,3ar,5s,9s,10s,11s,13r,13ar)-9,10,11-tris(acetyloxy)-1,3a-dihydroxy-2,5,8,8-tetramethyl-13-{[(2r)-2-methylbutanoyl]oxy}-12-methylidene-4-oxo-1h,3h,5h,9h,10h,11h,13h,13ah-cyclopenta[12]annulen-2-yl pyridine-3-carboxylate)