NP-MRD: Showing NP-Card for 2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol (NP0226855)

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Record Information

Version

2.0

Created at

2022-09-06 06:01:18 UTC

Updated at

2022-09-06 06:01:19 UTC

NP-MRD ID

NP0226855

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Description

2-[4-(16-{[3,4-Dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]Icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol belongs to the class of organic compounds known as steroidal saponins. These are saponins in which the aglycone moiety is a steroid. The steroidal aglycone is usually a spirostane, furostane, spirosolane, solanidane, or curcubitacin derivative. 2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol is found in Tribulus terrestris. 2-[4-(16-{[3,4-Dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]Icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004261500242D          

 64 71  0  0  0  0            999 V2000
    1.4327   -3.0753    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6833   -2.2892    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4893   -2.1132    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0447   -2.7231    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8507   -2.5471    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4669   -3.0956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3853   -3.9166    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1791   -2.6791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0030   -1.8731    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7151   -1.4566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3313   -2.0052    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1513   -1.9143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4826   -1.1588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3026   -1.0679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7913   -1.7326    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6112   -1.6417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0999   -2.3064    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9199   -2.2156    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.4086   -2.8803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0773   -3.6358    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.5659   -4.3005    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2346   -5.0561    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7233   -5.7208    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.3859   -4.2097    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8746   -4.8744    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.6946   -4.7835    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.0259   -4.0279    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.8459   -3.9371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.1772   -3.1815    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.9972   -3.0907    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.3345   -4.6018    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.1545   -4.5109    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.0032   -5.3573    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4919   -6.0220    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.1833   -5.4482    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.8520   -6.2038    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.7172   -3.4541    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5372   -3.3633    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.2286   -2.7894    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5599   -2.0339    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.7686   -3.0620    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2573   -3.7267    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.9486   -3.1529    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4600   -2.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1286   -3.2437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6400   -2.5790    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3087   -3.3346    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4887   -3.4254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0000   -2.7607    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5915   -3.4775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1820   -1.7915    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1278   -1.6793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3218   -1.8553    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2337   -1.2454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0397   -1.4214    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5952   -0.8115    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4012   -0.9875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9566   -0.3776    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3446   -0.0254    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9001    0.5845    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5387    0.1506    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2881    0.9367    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0168   -0.4593    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8228   -0.2833    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 21 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 28 31  1  0  0  0  0
 31 32  1  0  0  0  0
 31 33  1  0  0  0  0
 33 34  1  0  0  0  0
 33 35  1  0  0  0  0
 26 35  1  0  0  0  0
 35 36  1  0  0  0  0
 24 37  1  0  0  0  0
 37 38  1  0  0  0  0
 37 39  1  0  0  0  0
 19 39  1  0  0  0  0
 39 40  1  0  0  0  0
 17 41  1  0  0  0  0
 41 42  1  0  0  0  0
 41 43  1  0  0  0  0
 43 44  1  0  0  0  0
 15 44  1  0  0  0  0
 44 45  1  0  0  0  0
 44 46  1  0  0  0  0
 12 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
  8 49  1  0  0  0  0
 11 49  1  0  0  0  0
 49 50  1  0  0  0  0
  9 51  1  0  0  0  0
  5 51  1  0  0  0  0
  2 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
 57 58  1  0  0  0  0
 56 59  1  0  0  0  0
 59 60  1  0  0  0  0
 59 61  1  0  0  0  0
 61 62  1  0  0  0  0
 61 63  1  0  0  0  0
 54 63  1  0  0  0  0
 63 64  1  0  0  0  0
M  END

     RDKit          3D

138145  0  0  0  0  0  0  0  0999 V2000
    5.1877    1.0920   -1.4541 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8333    1.1393   -0.0207 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3687    0.5396    1.0075 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5118   -0.3749    1.0565 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5527   -0.2331    0.0155 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2604    1.1233    0.0939 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.9193    1.2519    1.4348 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1673    1.2183   -1.0779 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1327    0.3308   -1.2115 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2133    0.1729   -0.4366 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.3113   -1.0013    0.2417 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.9411   -2.0383   -0.3683 C   0  0  1  0  0  0  0  0  0  0  0  0
   11.3047   -2.5804   -1.6023 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0097   -3.0557   -1.3034 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.4188   -1.7527   -0.6021 C   0  0  1  0  0  0  0  0  0  0  0  0
   13.7119   -2.0783   -1.9154 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.6378   -0.2436   -0.4543 C   0  0  1  0  0  0  0  0  0  0  0  0
   14.8924    0.1052   -0.8847 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.5174    0.4879   -1.1551 C   0  0  2  0  0  0  0  0  0  0  0  0
   12.7691    1.8709   -1.1019 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6826    0.8815    2.2011 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8253    1.9603    1.9959 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4378    1.7194    2.5528 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5503    1.9032    1.3610 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.1862    1.3369    1.4717 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2831    1.2841    2.9235 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7063    0.8641    3.0287 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1845    0.2301    1.7564 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5736   -0.3559    1.8974 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9619   -0.8206    0.4968 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.2930   -0.9670    0.3250 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9784   -0.1807   -0.5530 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.8439    0.7097   -0.0423 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0390    0.1732    0.3251 C   0  0  2  0  0  0  0  0  0  0  0  0
   -7.9058   -0.8356    1.4314 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3284   -0.3026    2.5690 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7542   -0.4852   -0.8485 C   0  0  1  0  0  0  0  0  0  0  0  0
  -10.0037    0.0299   -0.9400 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0407   -0.8597   -0.7221 C   0  0  2  0  0  0  0  0  0  0  0  0
  -12.0207   -0.7952   -1.7102 O   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1891    0.5009   -2.1722 C   0  0  1  0  0  0  0  0  0  0  0  0
  -13.1896    0.4604   -3.3065 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.7250   -0.3486   -4.3355 O   0  0  0  0  0  0  0  0  0  0  0  0
  -12.6434    1.3589   -1.0395 C   0  0  2  0  0  0  0  0  0  0  0  0
  -11.8115    2.4492   -0.8125 O   0  0  0  0  0  0  0  0  0  0  0  0
  -12.8355    0.6081    0.2394 C   0  0  1  0  0  0  0  0  0  0  0  0
  -14.0810   -0.0286    0.1965 O   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7272   -0.3603    0.5596 C   0  0  1  0  0  0  0  0  0  0  0  0
  -12.3040   -1.4751    1.1664 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8949   -0.3714   -2.0905 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.7070    0.9319   -2.5175 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5290   -0.9120   -1.7371 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.6699   -0.8714   -2.8427 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1070   -1.9957    0.1702 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2853   -3.0816    1.0084 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6933   -1.5456    0.0531 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1879   -0.7668    1.2419 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8746   -1.7656    2.3254 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0170    0.0185    0.7771 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2711   -0.8112    0.7599 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3547   -0.0815    0.0220 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3613    1.3838    0.1910 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8080    2.1009   -1.0388 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7045    1.9900    0.5100 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3697    1.6007   -2.0493 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0967    1.6375   -1.7440 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1461    0.0417   -1.8535 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0296   -0.3661    2.0482 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1348   -1.4465    0.9866 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2761   -0.4870   -1.0172 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3748   -0.9682    0.2734 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4691    1.9367    0.0608 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6046    2.0935    1.5190 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0912    1.3575    2.2162 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4365    0.3118    1.6848 H   0  0  0  0  0  0  0  0  0  0  0  0
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    8.5345    1.1855   -2.0457 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1771    0.9829    0.3659 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1533004261500242D          

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M  END
> <DATABASE_ID>
NP0226855

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(CCC1=C(C)C2C(CC3C4CCC5CC(OC6OC(CO)C(OC7OC(CO)C(O)C(O)C7O)C(O)C6O)C(O)CC5(C)C4CCC23C)O1)COC1OC(CO)C(O)C(O)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C45H74O19/c1-18(17-58-41-37(55)34(52)32(50)28(14-46)61-41)5-8-25-19(2)31-27(59-25)12-23-21-7-6-20-11-26(24(49)13-45(20,4)22(21)9-10-44(23,31)3)60-42-39(57)36(54)40(30(16-48)63-42)64-43-38(56)35(53)33(51)29(15-47)62-43/h18,20-24,26-43,46-57H,5-17H2,1-4H3

> <INCHI_KEY>
BFJMVVWIMMDZRY-UHFFFAOYSA-N

> <FORMULA>
C45H74O19

> <MOLECULAR_WEIGHT>
919.068

> <EXACT_MASS>
918.482430163

> <JCHEM_ACCEPTOR_COUNT>
19

> <JCHEM_ATOM_COUNT>
138

> <JCHEM_AVERAGE_POLARIZABILITY>
98.86405062340948

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
12

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2-[(4,5-dihydroxy-6-{[15-hydroxy-7,9,13-trimethyl-6-(3-methyl-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}butyl)-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-16-yl]oxy}-2-(hydroxymethyl)oxan-3-yl)oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

> <ALOGPS_LOGP>
-1.04

> <JCHEM_LOGP>
-2.137361097999998

> <ALOGPS_LOGS>
-3.17

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
8

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.200349669073363

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.755385980504565

> <JCHEM_PKA_STRONGEST_BASIC>
-3.648377298756638

> <JCHEM_POLAR_SURFACE_AREA>
307.37

> <JCHEM_REFRACTIVITY>
221.1983000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
13

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
6.22e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-[(4,5-dihydroxy-6-{[15-hydroxy-7,9,13-trimethyl-6-(3-methyl-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}butyl)-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-16-yl]oxy}-2-(hydroxymethyl)oxan-3-yl)oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 26-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   26-APR-15         0                                  
HETATM    1  C   UNK     0       2.674  -5.741   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.142  -4.273   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.647  -3.945   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.684  -5.083   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       7.188  -4.755   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.338  -5.779   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.186  -7.311   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.668  -5.001   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       9.339  -3.497   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.668  -2.719   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      11.818  -3.743   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      13.349  -3.573   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      13.968  -2.163   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      15.498  -1.993   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      16.410  -3.234   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      17.941  -3.065   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      18.853  -4.305   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      20.384  -4.136   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      21.296  -5.377   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      20.678  -6.787   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      21.590  -8.028   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      20.971  -9.438   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      21.884 -10.679   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      23.120  -7.858   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      24.033  -9.099   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      25.563  -8.929   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      26.182  -7.519   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      27.712  -7.349   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      28.331  -5.939   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      29.861  -5.769   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      28.624  -8.590   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      30.155  -8.420   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0      28.006 -10.000   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      28.918 -11.241   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      26.475 -10.170   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      25.857 -11.580   0.000  0.00  0.00           O+0
HETATM   37  C   UNK     0      23.739  -6.448   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0      25.269  -6.278   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0      22.827  -5.207   0.000  0.00  0.00           C+0
HETATM   40  O   UNK     0      23.445  -3.797   0.000  0.00  0.00           O+0
HETATM   41  C   UNK     0      18.235  -5.716   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0      19.147  -6.956   0.000  0.00  0.00           O+0
HETATM   43  C   UNK     0      16.704  -5.885   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      15.792  -4.645   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      15.173  -6.055   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      14.261  -4.814   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      13.643  -6.225   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      12.112  -6.394   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      11.200  -5.153   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      10.438  -6.491   0.000  0.00  0.00           C+0
HETATM   51  O   UNK     0       7.806  -3.344   0.000  0.00  0.00           O+0
HETATM   52  C   UNK     0       2.105  -3.135   0.000  0.00  0.00           C+0
HETATM   53  O   UNK     0       0.601  -3.463   0.000  0.00  0.00           O+0
HETATM   54  C   UNK     0      -0.436  -2.325   0.000  0.00  0.00           C+0
HETATM   55  O   UNK     0      -1.941  -2.653   0.000  0.00  0.00           O+0
HETATM   56  C   UNK     0      -2.978  -1.515   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      -4.482  -1.843   0.000  0.00  0.00           C+0
HETATM   58  O   UNK     0      -5.519  -0.705   0.000  0.00  0.00           O+0
HETATM   59  C   UNK     0      -2.510  -0.047   0.000  0.00  0.00           C+0
HETATM   60  O   UNK     0      -3.547   1.091   0.000  0.00  0.00           O+0
HETATM   61  C   UNK     0      -1.005   0.281   0.000  0.00  0.00           C+0
HETATM   62  O   UNK     0      -0.538   1.748   0.000  0.00  0.00           O+0
HETATM   63  C   UNK     0       0.031  -0.857   0.000  0.00  0.00           C+0
HETATM   64  O   UNK     0       1.536  -0.529   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   52                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   51                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   49                                                  
CONECT    9    8   10   51                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   49                                                  
CONECT   12   11   13   46                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   44                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   41                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20   39                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22   24                                                  
CONECT   22   21   23                                                       
CONECT   23   22                                                            
CONECT   24   21   25   37                                                  
CONECT   25   24   26                                                       
CONECT   26   25   27   35                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29   31                                                  
CONECT   29   28   30                                                       
CONECT   30   29                                                            
CONECT   31   28   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   26   36                                                  
CONECT   36   35                                                            
CONECT   37   24   38   39                                                  
CONECT   38   37                                                            
CONECT   39   37   19   40                                                  
CONECT   40   39                                                            
CONECT   41   17   42   43                                                  
CONECT   42   41                                                            
CONECT   43   41   44                                                       
CONECT   44   43   15   45   46                                             
CONECT   45   44                                                            
CONECT   46   44   12   47                                                  
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48    8   11   50                                             
CONECT   50   49                                                            
CONECT   51    9    5                                                       
CONECT   52    2   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55   63                                                  
CONECT   55   54   56                                                       
CONECT   56   55   57   59                                                  
CONECT   57   56   58                                                       
CONECT   58   57                                                            
CONECT   59   56   60   61                                                  
CONECT   60   59                                                            
CONECT   61   59   62   63                                                  
CONECT   62   61                                                            
CONECT   63   61   54   64                                                  
CONECT   64   63                                                            
MASTER        0    0    0    0    0    0    0    0   64    0  142    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₄₅H₇₄O₁₉

Average Mass

919.0680 Da

Monoisotopic Mass

918.48243 Da

IUPAC Name

2-[(4,5-dihydroxy-6-{[15-hydroxy-7,9,13-trimethyl-6-(3-methyl-4-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}butyl)-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-16-yl]oxy}-2-(hydroxymethyl)oxan-3-yl)oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Traditional Name

CAS Registry Number

Not Available

SMILES

CC(CCC1=C(C)C2C(CC3C4CCC5CC(OC6OC(CO)C(OC7OC(CO)C(O)C(O)C7O)C(O)C6O)C(O)CC5(C)C4CCC23C)O1)COC1OC(CO)C(O)C(O)C1O

InChI Identifier

InChI=1S/C45H74O19/c1-18(17-58-41-37(55)34(52)32(50)28(14-46)61-41)5-8-25-19(2)31-27(59-25)12-23-21-7-6-20-11-26(24(49)13-45(20,4)22(21)9-10-44(23,31)3)60-42-39(57)36(54)40(30(16-48)63-42)64-43-38(56)35(53)33(51)29(15-47)62-43/h18,20-24,26-43,46-57H,5-17H2,1-4H3

InChI Key

BFJMVVWIMMDZRY-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Tribulus terrestris	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as steroidal saponins. These are saponins in which the aglycone moiety is a steroid. The steroidal aglycone is usually a spirostane, furostane, spirosolane, solanidane, or curcubitacin derivative.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Steroidal glycosides

Direct Parent

Steroidal saponins

Alternative Parents

Substituents

Steroidal saponin
Diterpene glycoside
Furostane-skeleton
Diterpenoid
2-hydroxysteroid
Hydroxysteroid
Terpene glycoside
Fatty acyl glycoside
Fatty acyl glycoside of mono- or disaccharide
Alkyl glycoside
Disaccharide
Glycosyl compound
O-glycosyl compound
Fatty acyl
Oxane
Dihydrofuran
Cyclic alcohol
Secondary alcohol
Polyol
Oxacycle
Organoheterocyclic compound
Acetal
Primary alcohol
Alcohol
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-1	ALOGPS
logP	-2.1	ChemAxon
logS	-3.2	ALOGPS
pKa (Strongest Acidic)	11.76	ChemAxon
pKa (Strongest Basic)	-3.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	19	ChemAxon
Hydrogen Donor Count	12	ChemAxon
Polar Surface Area	307.37 Å²	ChemAxon
Rotatable Bond Count	13	ChemAxon
Refractivity	221.2 m³·mol⁻¹	ChemAxon
Polarizability	98.86 Å³	ChemAxon
Number of Rings	8	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol (NP0226855)

MOL for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

3D MOL for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

3D SDF for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

3D-SDF for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

PDB for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

3D PDB for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

SMILES for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

INCHI for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

Structure for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)

3D Structure for NP0226855 (2-[4-(16-{[3,4-dihydroxy-6-(hydroxymethyl)-5-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-15-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.0²,⁹.0⁴,⁸.0¹³,¹⁸]icos-6-en-6-yl)-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol)