NP-MRD: Showing NP-Card for (1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol (NP0226493)

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Record Information

Version

2.0

Created at

2022-09-06 05:32:50 UTC

Updated at

2022-09-06 05:32:51 UTC

NP-MRD ID

NP0226493

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol

Description

(1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol is found in Neolitsea sericea and Phoebe grandis.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652309062207322D          

 21 25  0  0  1  0            999 V2000
    4.6305    1.6320    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8055    1.6320    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3930    0.9175    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5680    0.9175    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1555    1.6320    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5680    2.3464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3930    2.3464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6706    0.9645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8860    1.2195    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1715    0.8070    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5429    1.2195    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5429    2.0445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1715    2.4570    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4444    3.4035    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2291    3.6584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8421    3.1064    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6706    2.2994    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8860    2.0445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5566    3.5189    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3851    4.3259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5646    4.4121    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  2  7  1  0  0  0  0
  5  8  1  6  0  0  0
  9  8  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
  5 17  1  0  0  0  0
 17 18  2  0  0  0  0
 13 18  1  0  0  0  0
  9 18  1  0  0  0  0
 16 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 15 21  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0226493

> <DATABASE_NAME>
NP-MRD

> <SMILES>
O[C@H]1CC[C@]2(C[C@H]3NCCC4=CC5=C(OCO5)C2=C34)CC1

> <INCHI_IDENTIFIER>
InChI=1S/C17H21NO3/c19-11-1-4-17(5-2-11)8-12-14-10(3-6-18-12)7-13-16(15(14)17)21-9-20-13/h7,11-12,18-19H,1-6,8-9H2/t11-,12-,17+/m1/s1

> <INCHI_KEY>
KWWQMZNQWSVKHN-QFSBIZTOSA-N

> <FORMULA>
C17H21NO3

> <MOLECULAR_WEIGHT>
287.359

> <EXACT_MASS>
287.15214354

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
42

> <JCHEM_AVERAGE_POLARIZABILITY>
31.513768186735664

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1s,4s,12'R)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0^{2,6}.0^{12,15}]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol

> <JCHEM_LOGP>
1.8092686426666664

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.259045029946908

> <JCHEM_PKA_STRONGEST_BASIC>
8.937427536236516

> <JCHEM_POLAR_SURFACE_AREA>
50.72

> <JCHEM_REFRACTIVITY>
78.6573

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1s,4s,12'R)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0^{2,6}.0^{12,15}]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  O   UNK     0       8.644   3.046   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       7.104   3.046   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.334   1.713   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.794   1.713   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.024   3.046   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.794   4.380   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.334   4.380   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       3.118   1.800   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.654   2.276   0.000  0.00  0.00           C+0
HETATM   10  N   UNK     0       0.320   1.506   0.000  0.00  0.00           N+0
HETATM   11  C   UNK     0      -1.013   2.276   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -1.013   3.816   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.320   4.586   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.830   6.353   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.294   6.829   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.439   5.799   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.118   4.292   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.654   3.816   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       4.772   6.569   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       4.452   8.075   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       2.921   8.236   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    7                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    8   17                                             
CONECT    6    5    7                                                       
CONECT    7    6    2                                                       
CONECT    8    5    9                                                       
CONECT    9    8   10   18                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   21                                                  
CONECT   16   15   17   19                                                  
CONECT   17   16    5   18                                                  
CONECT   18   17   13    9                                                  
CONECT   19   16   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   15                                                       
MASTER        0    0    0    0    0    0    0    0   21    0   50    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₇H₂₁NO₃

Average Mass

287.3590 Da

Monoisotopic Mass

287.15214 Da

IUPAC Name

(1s,4s,12'R)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0^{2,6}.0^{12,15}]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol

Traditional Name

(1s,4s,12'R)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0^{2,6}.0^{12,15}]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol

CAS Registry Number

Not Available

SMILES

O[C@H]1CC[C@]2(C[C@H]3NCCC4=CC5=C(OCO5)C2=C34)CC1

InChI Identifier

InChI=1S/C17H21NO3/c19-11-1-4-17(5-2-11)8-12-14-10(3-6-18-12)7-13-16(15(14)17)21-9-20-13/h7,11-12,18-19H,1-6,8-9H2/t11-,12-,17+/m1/s1

InChI Key

KWWQMZNQWSVKHN-QFSBIZTOSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Neolitsea sericea	LOTUS Database	35616633
Phoebe grandis	LOTUS Database	35616633

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.81	ChemAxon
pKa (Strongest Acidic)	15.26	ChemAxon
pKa (Strongest Basic)	8.94	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	50.72 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	78.66 m³·mol⁻¹	ChemAxon
Polarizability	31.51 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol (NP0226493)

MOL for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

3D MOL for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

3D SDF for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

3D-SDF for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

PDB for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

3D PDB for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

SMILES for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

INCHI for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

Structure for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)

3D Structure for NP0226493 ((1s,4s,12'r)-3',5'-dioxa-11'-azaspiro[cyclohexane-1,14'-tetracyclo[6.6.1.0²,⁶.0¹²,¹⁵]pentadecane]-1'(15'),2'(6'),7'-trien-4-ol)