NP-MRD: Showing NP-Card for [(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate (NP0225129)

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Record Information

Version

2.0

Created at

2022-09-06 03:45:43 UTC

Updated at

2022-09-06 03:45:44 UTC

NP-MRD ID

NP0225129

Secondary Accession Numbers

None

Natural Product Identification

Common Name

[(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate

Description

[(2R,3S)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2R)-2-methylbutanoate belongs to the class of organic compounds known as phenol esters. These are aromatic compounds containing a benzene ring substituted by a hydroxyl group and an ester group. [(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate is found in Cosmos caudatus. Based on a literature review very few articles have been published on [(2R,3S)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2R)-2-methylbutanoate.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652309062205452D          

 25 26  0  0  1  0            999 V2000
    2.5559   -4.4270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2704   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9849   -4.4270    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9849   -3.6020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6993   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6993   -5.6645    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4138   -4.4270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1283   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8427   -4.4270    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.2552   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6677   -4.4270    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.3822   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0967   -4.4270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8112   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8112   -5.6645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.5256   -6.0770    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2401   -5.6645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2401   -4.8395    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.9546   -6.0770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6690   -5.6645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9546   -6.9020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0967   -6.0770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0967   -6.9020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3822   -7.3145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3822   -5.6645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  1  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  9  8  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 15 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 22 25  2  0  0  0  0
 12 25  1  0  0  0  0
M  END


  Mrv1652309062205452D          

 25 26  0  0  1  0            999 V2000
    2.5559   -4.4270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2704   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9849   -4.4270    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9849   -3.6020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6993   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6993   -5.6645    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4138   -4.4270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1283   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8427   -4.4270    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.2552   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6677   -4.4270    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.3822   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0967   -4.4270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8112   -4.8395    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8112   -5.6645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.5256   -6.0770    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2401   -5.6645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2401   -4.8395    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.9546   -6.0770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6690   -5.6645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9546   -6.9020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0967   -6.0770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0967   -6.9020    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3822   -7.3145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3822   -5.6645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  1  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  9  8  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 15 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 22 25  2  0  0  0  0
 12 25  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0225129

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC[C@@H](C)C(=O)OC[C@H]1O[C@H]1C1=CC=C(OC(=O)C(C)C)C(OC)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C19H26O6/c1-6-12(4)19(21)23-10-16-17(24-16)13-7-8-14(15(9-13)22-5)25-18(20)11(2)3/h7-9,11-12,16-17H,6,10H2,1-5H3/t12-,16-,17+/m1/s1

> <INCHI_KEY>
PSKGEGCPRNMROV-JLZZUVOBSA-N

> <FORMULA>
C19H26O6

> <MOLECULAR_WEIGHT>
350.411

> <EXACT_MASS>
350.172938557

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
51

> <JCHEM_AVERAGE_POLARIZABILITY>
37.96777471208104

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
[(2R,3S)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2R)-2-methylbutanoate

> <JCHEM_LOGP>
3.9292577716666672

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.165581845000742

> <JCHEM_POLAR_SURFACE_AREA>
74.36

> <JCHEM_REFRACTIVITY>
91.03970000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
10

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
[(2R,3S)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2R)-2-methylbutanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  C   UNK     0       4.771  -8.264   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.105  -9.034   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       7.438  -8.264   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       7.438  -6.724   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.772  -9.034   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       8.772 -10.574   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0      10.106  -8.264   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      11.439  -9.034   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      12.773  -8.264   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      13.543  -6.930   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0      14.313  -8.264   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      15.647  -9.034   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      16.980  -8.264   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      18.314  -9.034   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      18.314 -10.574   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      19.648 -11.344   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      20.982 -10.574   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      20.982  -9.034   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      22.315 -11.344   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      23.649 -10.574   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      22.315 -12.884   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      16.980 -11.344   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      16.980 -12.884   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      15.647 -13.654   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      15.647 -10.574   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9   11                                                       
CONECT   11   10    9   12                                                  
CONECT   12   11   13   25                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   22                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19                                                            
CONECT   22   15   23   25                                                  
CONECT   23   22   24                                                       
CONECT   24   23                                                            
CONECT   25   22   12                                                       
MASTER        0    0    0    0    0    0    0    0   25    0   52    0
END

View in JSmol

Synonyms

Value	Source
[(2R,3S)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2R)-2-methylbutanoic acid	Generator

Chemical Formula

C₁₉H₂₆O₆

Average Mass

350.4110 Da

Monoisotopic Mass

350.17294 Da

IUPAC Name

[(2R,3S)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2R)-2-methylbutanoate

Traditional Name

[(2R,3S)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2R)-2-methylbutanoate

CAS Registry Number

Not Available

SMILES

CC[C@@H](C)C(=O)OC[C@H]1O[C@H]1C1=CC=C(OC(=O)C(C)C)C(OC)=C1

InChI Identifier

InChI=1S/C19H26O6/c1-6-12(4)19(21)23-10-16-17(24-16)13-7-8-14(15(9-13)22-5)25-18(20)11(2)3/h7-9,11-12,16-17H,6,10H2,1-5H3/t12-,16-,17+/m1/s1

InChI Key

PSKGEGCPRNMROV-JLZZUVOBSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Cosmos caudatus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenol esters. These are aromatic compounds containing a benzene ring substituted by a hydroxyl group and an ester group.

Kingdom

Organic compounds

Super Class

Benzenoids

Class

Phenol esters

Sub Class

Not Available

Direct Parent

Phenol esters

Alternative Parents

Substituents

Phenol ester
Phenoxy compound
Anisole
Methoxybenzene
Phenol ether
Alkyl aryl ether
Fatty acid ester
Monocyclic benzene moiety
Dicarboxylic acid or derivatives
Fatty acyl
Carboxylic acid ester
Ether
Oxirane
Dialkyl ether
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Carbonyl group
Organic oxygen compound
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.93	ChemAxon
pKa (Strongest Basic)	-4.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	74.36 Å²	ChemAxon
Rotatable Bond Count	10	ChemAxon
Refractivity	91.04 m³·mol⁻¹	ChemAxon
Polarizability	37.97 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163191249

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for [(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate (NP0225129)

MOL for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

3D MOL for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

3D SDF for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

3D-SDF for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

PDB for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

3D PDB for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

SMILES for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

INCHI for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

Structure for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)

3D Structure for NP0225129 ([(2r,3s)-3-{3-methoxy-4-[(2-methylpropanoyl)oxy]phenyl}oxiran-2-yl]methyl (2r)-2-methylbutanoate)