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Showing NP-Card for 5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione (NP0223532)

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Record Information
Version2.0
Created at2022-09-06 01:39:12 UTC
Updated at2022-09-06 01:39:12 UTC
NP-MRD IDNP0223532
Secondary Accession NumbersNone
Natural Product Identification
Common Name5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione
Description5-(5-Hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3,4-dihydro-2H-1-benzopyran-3-yl)pentane-2,3-dione belongs to the class of organic compounds known as 2,2-dimethyl-1-benzopyrans. These are organic compounds containing a 1-benzopyran moiety that carries two methyl groups at the 2-position. 5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione is found in Cannabis sativa. 5-(5-Hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3,4-dihydro-2H-1-benzopyran-3-yl)pentane-2,3-dione is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
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MOLSDFPDBSMILESInChI

MOL for NP0223532 (5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione)


  Mrv1533004191522422D          

 26 27  0  0  0  0            999 V2000
   -7.1447   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4302   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4302   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7158   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7158    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2868    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2868    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3309    1.3808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8612    0.4623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2868    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 13 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 21 24  1  0  0  0  0
 24 25  1  0  0  0  0
 10 25  1  0  0  0  0
 25 26  2  0  0  0  0
  6 26  1  0  0  0  0
M  END
Download

3D MOL for NP0223532 (5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione)

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3D SDF for NP0223532 (5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione)

  Mrv1533004191522422D          

 26 27  0  0  0  0            999 V2000
   -7.1447   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4302   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4302   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7158   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7158    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2868    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2868    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3309    1.3808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8612    0.4623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5724    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2868    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 13 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 21 24  1  0  0  0  0
 24 25  1  0  0  0  0
 10 25  1  0  0  0  0
 25 26  2  0  0  0  0
  6 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0223532

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCC1=CC(O)=C2C(=O)C(CCC(=O)C(C)=O)C(C)(C)OC2=C1

> <INCHI_IDENTIFIER>
InChI=1S/C21H28O5/c1-5-6-7-8-14-11-17(24)19-18(12-14)26-21(3,4)15(20(19)25)9-10-16(23)13(2)22/h11-12,15,24H,5-10H2,1-4H3

> <INCHI_KEY>
VZLDLHYWDGOXRE-UHFFFAOYSA-N

> <FORMULA>
C21H28O5

> <MOLECULAR_WEIGHT>
360.45

> <EXACT_MASS>
360.193674002

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
54

> <JCHEM_AVERAGE_POLARIZABILITY>
40.426087036338586

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3,4-dihydro-2H-1-benzopyran-3-yl)pentane-2,3-dione

> <ALOGPS_LOGP>
4.40

> <JCHEM_LOGP>
5.3775732823333335

> <ALOGPS_LOGS>
-4.74

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.381384547778932

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.839599236076824

> <JCHEM_PKA_STRONGEST_BASIC>
-4.930326521514513

> <JCHEM_POLAR_SURFACE_AREA>
80.67

> <JCHEM_REFRACTIVITY>
99.8864

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
6.50e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3H-1-benzopyran-3-yl)pentane-2,3-dione

> <JCHEM_VEBER_RULE>
0

$$$$

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3D-SDF for NP0223532 (5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione)
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PDB for NP0223532 (5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione)
HEADER    PROTEIN                                 19-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-APR-15         0                                  
HETATM    1  C   UNK     0     -13.337  -3.080   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0     -12.003  -2.310   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0     -12.003  -0.770   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0     -10.669  -0.000   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0     -10.669   1.540   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -9.336   2.310   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -9.336   3.850   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -8.002   4.620   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      -8.002   6.160   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      -6.668   3.850   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -5.335   4.620   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      -5.335   6.160   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      -4.001   3.850   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.667   4.620   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -1.334   3.850   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.000   4.620   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       0.000   6.160   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       2.667   4.620   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -4.001   2.310   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -2.484   2.577   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.474   0.863   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      -5.335   1.540   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      -6.668   2.310   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -8.002   1.540   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   26                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11   25                                                  
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   21                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18                                                            
CONECT   21   13   22   23   24                                             
CONECT   22   21                                                            
CONECT   23   21                                                            
CONECT   24   21   25                                                       
CONECT   25   24   10   26                                                  
CONECT   26   25    6                                                       
MASTER        0    0    0    0    0    0    0    0   26    0   54    0
END

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3D PDB for NP0223532 (5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione)
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SMILES for NP0223532 (5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione)
CCCCCC1=CC(O)=C2C(=O)C(CCC(=O)C(C)=O)C(C)(C)OC2=C1
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INCHI for NP0223532 (5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3h-1-benzopyran-3-yl)pentane-2,3-dione)
InChI=1S/C21H28O5/c1-5-6-7-8-14-11-17(24)19-18(12-14)26-21(3,4)15(20(19)25)9-10-16(23)13(2)22/h11-12,15,24H,5-10H2,1-4H3
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View in JSmol
SynonymsNot Available
Chemical FormulaC21H28O5
Average Mass360.4500 Da
Monoisotopic Mass360.19367 Da
IUPAC Name5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3,4-dihydro-2H-1-benzopyran-3-yl)pentane-2,3-dione
Traditional Name5-(5-hydroxy-2,2-dimethyl-4-oxo-7-pentyl-3H-1-benzopyran-3-yl)pentane-2,3-dione
CAS Registry NumberNot Available
SMILES
CCCCCC1=CC(O)=C2C(=O)C(CCC(=O)C(C)=O)C(C)(C)OC2=C1
InChI Identifier
InChI=1S/C21H28O5/c1-5-6-7-8-14-11-17(24)19-18(12-14)26-21(3,4)15(20(19)25)9-10-16(23)13(2)22/h11-12,15,24H,5-10H2,1-4H3
InChI KeyVZLDLHYWDGOXRE-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Cannabis sativaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 2,2-dimethyl-1-benzopyrans. These are organic compounds containing a 1-benzopyran moiety that carries two methyl groups at the 2-position.
KingdomOrganic compounds  
Super ClassOrganoheterocyclic compounds  
ClassBenzopyrans  
Sub Class1-benzopyrans  
Direct Parent2,2-dimethyl-1-benzopyrans  
Alternative Parents
Substituents
  • 2,2-dimethyl-1-benzopyran
    • 

  • Chromone
    • 

  • Aryl ketone
    • 

  • Aryl alkyl ketone
    • 

  • 1-hydroxy-4-unsubstituted benzenoid
    • 

  • 1-hydroxy-2-unsubstituted benzenoid
    • 

  • Alkyl aryl ether
    • 

  • Alpha-diketone
    • 

  • Benzenoid
    • 

  • Vinylogous acid
    • 

  • Ketone
    • 

  • Ether
    • 

  • Oxacycle
    • 

  • Organic oxygen compound
    • 

  • Hydrocarbon derivative
    • 

  • Organooxygen compound
    • 

  • Organic oxide
    • 

  • Carbonyl group
    • 

  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.4ALOGPS
logP5.38ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)8.84ChemAxon
pKa (Strongest Basic)-4.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area80.67 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity99.89 m³·mol⁻¹ChemAxon
Polarizability40.43 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]