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Record Information
Version2.0
Created at2022-09-05 23:20:51 UTC
Updated at2022-09-05 23:20:51 UTC
NP-MRD IDNP0221700
Secondary Accession NumbersNone
Natural Product Identification
Common Name(2r)-3-hydroxy-2-[(9z,12z)-octadeca-9,12-dienoyloxy]propoxyphosphonic acid
DescriptionLysophosphatidic acid 0:0/18:2(9Z,12Z), also known as 2-(9Z,12Z-octadecadienoyl)-phosphatidic acid or 2-linoleoyl-glycero-3-phosphate, belongs to the class of organic compounds known as 2-acylglycerol-3-phosphates. These are lysophosphatidic acids where the glycerol is esterified with a fatty acid at O-2 position. (2r)-3-hydroxy-2-[(9z,12z)-octadeca-9,12-dienoyloxy]propoxyphosphonic acid is found in Trypanosoma brucei. Lysophosphatidic acid 0:0/18:2(9Z,12Z) is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.
Structure
Thumb
Synonyms
ValueSource
2-(9Z,12Z-Octadecadienoyl)-phosphatidic acidChEBI
2-Linoleoyl-glycero-3-phosphateChEBI
LPA 0:0/18:2(9Z,12Z)ChEBI
LPA(0:0/18:2(9Z,12Z))ChEBI
Lysophosphatidic acid(0:0/18:2(9Z,12Z))ChEBI
2-(9Z,12Z-Octadecadienoyl)-phosphatidateGenerator
2-Linoleoyl-glycero-3-phosphoric acidGenerator
Lysophosphatidate(0:0/18:2(9Z,12Z))Generator
Lysophosphatidate 0:0/18:2(9Z,12Z)Generator
Chemical FormulaC21H39O7P
Average Mass434.5039 Da
Monoisotopic Mass434.24334 Da
IUPAC Name[(2R)-3-hydroxy-2-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propoxy]phosphonic acid
Traditional Name(2R)-3-hydroxy-2-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propoxyphosphonic acid
CAS Registry NumberNot Available
SMILES
CCCCC\C=C/C\C=C/CCCCCCCC(=O)O[C@]([H])(CO)COP(O)(=O)O
InChI Identifier
InChI=1S/C21H39O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(23)28-20(18-22)19-27-29(24,25)26/h6-7,9-10,20,22H,2-5,8,11-19H2,1H3,(H2,24,25,26)/b7-6-,10-9-/t20-/m1/s1
InChI KeyPALVOIADDFXQGT-KKFOGOCZSA-N
Experimental Spectra
Not Available
Predicted Spectra
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Trypanosoma bruceiLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 2-acylglycerol-3-phosphates. These are lysophosphatidic acids where the glycerol is esterified with a fatty acid at O-2 position.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassGlycerophospholipids
Sub ClassGlycerophosphates
Direct Parent2-acylglycerol-3-phosphates
Alternative Parents
Substituents
  • 2-acylglycerol-3-phosphate
  • Fatty acid ester
  • Monoalkyl phosphate
  • Fatty acyl
  • Alkyl phosphate
  • Organic phosphoric acid derivative
  • Phosphoric acid ester
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Organic oxygen compound
  • Carbonyl group
  • Primary alcohol
  • Organooxygen compound
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.53ALOGPS
logP5.12ChemAxon
logS-5.2ALOGPS
pKa (Strongest Acidic)1.32ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area113.29 ŲChemAxon
Rotatable Bond Count20ChemAxon
Refractivity116.42 m³·mol⁻¹ChemAxon
Polarizability48.24 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound53478601
PDB IDNot Available
ChEBI ID74330
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]