NP-MRD: Showing NP-Card for (1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one (NP0220834)

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Record Information

Version

2.0

Created at

2022-09-05 22:15:17 UTC

Updated at

2022-09-05 22:15:17 UTC

NP-MRD ID

NP0220834

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one

Description

Holadienine belongs to the class of organic compounds known as conanine-type alkaloids. These are alkaloids with a structure based on the conanine skeleton. (1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one is found in Holarrhena pubescens. (1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one was first documented in 2020 (PMID: 33163963). Based on a literature review very few articles have been published on Holadienine.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309062200152D          

 24 28  0  0  1  0            999 V2000
   -0.0401   -0.2282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7847   -0.2426    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2813    0.4162    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2958    1.2411    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0847    1.4822    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5579    0.8064    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3767    0.7057    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.8733    1.3646    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6921    1.2640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0144    0.5045    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8332    0.4039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1555   -0.3556    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9744   -0.4562    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6590   -1.0144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8401   -0.9138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5178   -0.1543    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0213   -0.8131    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6990   -0.0537    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2024   -0.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3836   -0.6119    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0613    0.1475    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0468   -0.6773    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2579   -0.9185    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.9892   -1.6985    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  1  0  0  0
  4  5  1  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  1  6  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 10 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
  7 18  1  0  0  0  0
 18 19  1  1  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
  3 21  1  0  0  0  0
  6 21  1  0  0  0  0
 21 22  1  1  0  0  0
 22 23  1  0  0  0  0
  2 23  1  0  0  0  0
 23 24  1  0  0  0  0
M  END

     RDKit          3D

 55 59  0  0  0  0  0  0  0  0999 V2000
    4.7620   -0.6977   -0.5636 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7753    0.3916   -0.2657 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5743    0.3882   -1.1571 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4700   -0.8795   -1.9991 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3434   -1.6743   -1.3180 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4602   -0.5731   -0.9113 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6103   -0.8690    0.0782 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4515   -2.0538   -0.1589 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8354   -1.8459   -0.6513 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4414   -0.5733   -0.2625 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5740   -0.1779   -0.7940 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1940    1.1019   -0.4145 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2791    1.4991   -0.9112 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5243    1.9165    0.5599 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3870    1.4919    1.0781 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7174    0.2455    0.7595 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7048   -0.5978    2.0315 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3688    0.4524    0.1942 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5143    1.4955    0.8162 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7266    1.6866   -0.0507 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4276    0.3886   -0.2175 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9475   -0.1492    1.0774 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3352    0.2666    1.0866 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.5199    1.4766    1.8620 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4080   -1.7099   -0.3152 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6404   -0.5163    0.1242 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2030   -0.6240   -1.5883 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3251    1.3637   -0.3862 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5679    1.2979   -1.7971 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0610   -0.5545   -2.9781 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3947   -1.4374   -2.0636 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8549   -2.2558   -2.1285 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7399   -2.3157   -0.5306 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0389   -0.0775   -1.7823 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1003   -1.0147    1.0796 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5025   -2.7408    0.7436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9096   -2.7036   -0.9121 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8411   -2.0056   -1.7644 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4828   -2.6891   -0.2741 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1125   -0.7585   -1.5312 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9475    2.8702    0.8673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9238    2.1452    1.8062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1947   -0.0810    2.8828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2339   -1.5615    1.9135 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6774   -0.8422    2.3590 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5268    0.7813   -0.8791 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2859    1.3659    1.8719 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0715    2.4751    0.7353 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3560    2.0513   -1.0304 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3941    2.4600    0.3463 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4735    0.3391    1.9645 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9245   -1.2308    1.1841 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6381    2.3759    1.2274 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6416    1.5650    2.5352 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4089    1.3186    2.5148 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  1
 16 18  1  0
 18 19  1  0
 19 20  1  0
 21 20  1  1
 21 22  1  0
 22 23  1  0
 23 24  1  0
 23  2  1  0
 21  3  1  0
 21  6  1  0
 18  7  1  0
 16 10  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
  2 28  1  1
  3 29  1  6
  4 30  1  0
  4 31  1  0
  5 32  1  0
  5 33  1  0
  6 34  1  6
  7 35  1  1
  8 36  1  0
  8 37  1  0
  9 38  1  0
  9 39  1  0
 11 40  1  0
 14 41  1  0
 15 42  1  0
 17 43  1  0
 17 44  1  0
 17 45  1  0
 18 46  1  6
 19 47  1  0
 19 48  1  0
 20 49  1  0
 20 50  1  0
 22 51  1  0
 22 52  1  0
 24 53  1  0
 24 54  1  0
 24 55  1  0
M  END


  Mrv1652309062200152D          

 24 28  0  0  1  0            999 V2000
   -0.0401   -0.2282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7847   -0.2426    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2813    0.4162    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2958    1.2411    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0847    1.4822    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5579    0.8064    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3767    0.7057    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.8733    1.3646    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6921    1.2640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0144    0.5045    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8332    0.4039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1555   -0.3556    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9744   -0.4562    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6590   -1.0144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8401   -0.9138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5178   -0.1543    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0213   -0.8131    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6990   -0.0537    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2024   -0.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3836   -0.6119    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0613    0.1475    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0468   -0.6773    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2579   -0.9185    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.9892   -1.6985    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  1  0  0  0
  4  5  1  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  1  6  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 10 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
  7 18  1  0  0  0  0
 18 19  1  1  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
  3 21  1  0  0  0  0
  6 21  1  0  0  0  0
 21 22  1  1  0  0  0
 22 23  1  0  0  0  0
  2 23  1  0  0  0  0
 23 24  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0220834

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1[C@H]2CC[C@H]3[C@@H]4CCC5=CC(=O)C=C[C@]5(C)[C@H]4CC[C@]23CN1C

> <INCHI_IDENTIFIER>
InChI=1S/C22H31NO/c1-14-18-6-7-20-17-5-4-15-12-16(24)8-10-21(15,2)19(17)9-11-22(18,20)13-23(14)3/h8,10,12,14,17-20H,4-7,9,11,13H2,1-3H3/t14-,17+,18+,19-,20-,21-,22-/m0/s1

> <INCHI_KEY>
PSOQPSXOOXHHBU-LJZXKFISSA-N

> <FORMULA>
C22H31NO

> <MOLECULAR_WEIGHT>
325.496

> <EXACT_MASS>
325.240564622

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
55

> <JCHEM_AVERAGE_POLARIZABILITY>
38.87791050303346

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2S,5S,6S,9R,12S,13R)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icosa-14,17-dien-16-one

> <JCHEM_LOGP>
3.885479535000001

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
18.863954050621125

> <JCHEM_PKA_STRONGEST_BASIC>
9.558021333417742

> <JCHEM_POLAR_SURFACE_AREA>
20.310000000000002

> <JCHEM_REFRACTIVITY>
100.06689999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,5S,6S,9R,12S,13R)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icosa-14,17-dien-16-one

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 06-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-SEP-22         0                                  
HETATM    1  C   UNK     0      -0.075  -0.426   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.465  -0.453   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.392   0.777   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.419   2.317   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.892   2.767   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.775   1.505   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.303   1.317   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       7.230   2.547   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.759   2.359   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.360   0.942   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      10.889   0.754   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      11.490  -0.664   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      13.019  -0.852   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0      10.563  -1.894   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       9.035  -1.706   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.433  -0.288   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.506  -1.518   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.905  -0.100   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       5.978  -1.330   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       4.449  -1.142   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.848   0.275   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.821  -1.264   0.000  0.00  0.00           C+0
HETATM   23  N   UNK     0       2.348  -1.714   0.000  0.00  0.00           N+0
HETATM   24  C   UNK     0       1.847  -3.171   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   23                                                  
CONECT    3    2    4   21                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   21                                                  
CONECT    7    6    8   18                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   16                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   10   17   18                                             
CONECT   17   16                                                            
CONECT   18   16    7   19                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20    3    6   22                                             
CONECT   22   21   23                                                       
CONECT   23   22    2   24                                                  
CONECT   24   23                                                            
MASTER        0    0    0    0    0    0    0    0   24    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₃₁NO

Average Mass

325.4960 Da

Monoisotopic Mass

325.24056 Da

IUPAC Name

(1R,2S,5S,6S,9R,12S,13R)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icosa-14,17-dien-16-one

Traditional Name

(1R,2S,5S,6S,9R,12S,13R)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icosa-14,17-dien-16-one

CAS Registry Number

Not Available

SMILES

C[C@H]1[C@H]2CC[C@H]3[C@@H]4CCC5=CC(=O)C=C[C@]5(C)[C@H]4CC[C@]23CN1C

InChI Identifier

InChI=1S/C22H31NO/c1-14-18-6-7-20-17-5-4-15-12-16(24)8-10-21(15,2)19(17)9-11-22(18,20)13-23(14)3/h8,10,12,14,17-20H,4-7,9,11,13H2,1-3H3/t14-,17+,18+,19-,20-,21-,22-/m0/s1

InChI Key

PSOQPSXOOXHHBU-LJZXKFISSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Holarrhena pubescens	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as conanine-type alkaloids. These are alkaloids with a structure based on the conanine skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Steroidal alkaloids

Direct Parent

Conanine-type alkaloids

Alternative Parents

Substituents

Conanine skeleton
3-oxosteroid
Oxosteroid
Azasteroid
Azaspirodecane
Alkaloid or derivatives
N-alkylpyrrolidine
Pyrrolidine
Ketone
Tertiary amine
Tertiary aliphatic amine
Cyclic ketone
Azacycle
Organoheterocyclic compound
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Organic nitrogen compound
Organic oxide
Carbonyl group
Organopnictogen compound
Amine
Organic oxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.89	ChemAxon
pKa (Strongest Acidic)	18.86	ChemAxon
pKa (Strongest Basic)	9.56	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	20.31 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	100.07 m³·mol⁻¹	ChemAxon
Polarizability	38.88 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00025498

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

12310532

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Ampofo EK, Amponsah IK, Asante-Kwatia E, Armah FA, Atchoglo PK, Mensah AY: Indigenous Medicinal Plants as Biofilm Inhibitors for the Mitigation of Antimicrobial Resistance. Adv Pharmacol Pharm Sci. 2020 Oct 24;2020:8821905. doi: 10.1155/2020/8821905. eCollection 2020. [PubMed:33163963 ]
LOTUS database [Link]

Showing NP-Card for (1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one (NP0220834)

MOL for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

3D MOL for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

3D SDF for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

3D-SDF for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

PDB for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

3D PDB for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

SMILES for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

INCHI for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

Structure for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)

3D Structure for NP0220834 ((1r,2s,5s,6s,9r,12s,13r)-6,7,13-trimethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icosa-14,17-dien-16-one)