NP-MRD: Showing NP-Card for (1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one (NP0219876)

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Record Information

Version

1.0

Created at

2022-09-05 21:00:50 UTC

Updated at

2022-09-05 21:00:50 UTC

NP-MRD ID

NP0219876

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one

Description

Javanicin M belongs to the class of organic compounds known as quassinoids. These are a group of compounds chemically degraded from triterpenes. According to their basic skeleton, quassinoids are categorized into five distinct groups, C-18, C-19, C-20, C-22 and C-25 types. The C-20 quassinoids can be further classified into two types, tetracyclic and the pentacyclic. The tetracyclic variety does not have oxygenation at C-20, while the pentacyclic quassinoids possess additional oxygenation at C-20 that allows for the formation of an additional ring. (1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one is found in Picrasma javanica. It was first documented in 2017 (PMID: 28150900). Based on a literature review a small amount of articles have been published on Javanicin M (PMID: 31935895) (PMID: 29292470).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052223002D          

 28 31  0  0  1  0            999 V2000
    5.7158    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5724    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  1  6  0  0  0
  8  9  1  0  0  0  0
  9 10  1  1  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 14 13  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  1  1  0  0  0
 15 17  1  0  0  0  0
 17 18  1  6  0  0  0
 18 19  1  0  0  0  0
 17 20  1  0  0  0  0
 20 21  1  1  0  0  0
 22 20  1  6  0  0  0
 22 23  1  0  0  0  0
  7 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
  3 25  1  0  0  0  0
 25 26  2  0  0  0  0
 22 27  1  0  0  0  0
 14 27  1  0  0  0  0
  9 27  1  0  0  0  0
 27 28  1  6  0  0  0
M  END

     RDKit          3D

 62 65  0  0  0  0  0  0  0  0999 V2000
    4.8144    2.4681    0.9580 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9919    1.6522    1.7799 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2821    0.6404    1.1485 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8728   -0.5006    0.7428 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1228   -1.5817    0.0700 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5119   -2.8946    0.7266 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6481   -1.4134    0.2500 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8332   -2.4831   -0.3835 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6152   -2.2091   -0.0284 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6807   -2.0960    1.3638 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0108   -2.1338    1.7293 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5786   -3.2673    1.1511 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6888   -0.8633    1.2812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5008   -0.6446   -0.1976 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9911    0.6969   -0.6274 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2708    1.0036    0.1128 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0399    1.8183   -0.3962 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4860    2.9251   -1.1110 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6617    4.0258   -0.2408 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6118    1.4885   -0.8530 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1884    2.5617   -0.5737 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2299    0.2223   -0.1273 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2358   -0.0038   -0.1228 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9016    0.3526   -1.4360 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8552    0.8461    0.9311 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2679    1.6972    1.6257 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0726   -0.9134   -0.6316 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0721   -1.0580   -2.1211 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5703    1.7893    0.4676 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2386    2.9305    0.1413 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3942    3.2072    1.5216 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9380   -0.6320    0.9156 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3872   -1.6690   -0.9926 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6225   -2.9557    0.7553 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1553   -3.7285    0.0776 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0718   -2.9500    1.7492 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4621   -1.4882    1.3611 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0022   -2.6055   -1.4585 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0966   -3.4424    0.1034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2174   -3.0386   -0.4184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1485   -2.2094    2.8331 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3318   -3.0258    0.5714 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3265   -0.0342    1.9032 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7773   -0.9863    1.4667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1283   -1.4137   -0.7176 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2391    0.6543   -1.7073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0194    1.2315    1.1823 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6687    1.9528   -0.3077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0221    0.2052    0.0267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9436    2.1046    0.6686 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7096    4.2831    0.2500 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0978    4.8843   -0.7894 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3739    3.7697    0.5769 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6724    1.3707   -1.9456 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2545    3.2173   -1.2856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5435    0.3848    0.9475 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3523    1.1250   -1.9744 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9316    0.7273   -1.2582 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0230   -0.5884   -2.0394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9491   -2.1399   -2.4241 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0497   -0.7586   -2.5747 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2969   -0.5073   -2.6461 H   0  0  0  0  0  0  0  0  0  0  0  0
 19 18  1  0
 18 17  1  0
 17 15  1  0
 15 16  1  0
 15 14  1  0
 14 13  1  0
 13 11  1  0
 11 12  1  0
 11 10  1  0
 10  9  1  0
  9  8  1  0
  8  7  1  0
  7  5  1  0
  5  6  1  0
  5  4  1  0
  4  3  2  0
  3  2  1  0
  2  1  1  0
  3 25  1  0
 25 26  2  0
 25 23  1  0
 23 24  1  6
 23 22  1  0
 22 20  1  0
 20 21  1  0
 22 27  1  0
 27 28  1  6
 20 17  1  0
 27 14  1  0
 27  9  1  0
 23  7  1  0
 19 51  1  0
 19 52  1  0
 19 53  1  0
 17 50  1  1
 15 46  1  6
 16 47  1  0
 16 48  1  0
 16 49  1  0
 14 45  1  6
 13 43  1  0
 13 44  1  0
 11 41  1  1
 12 42  1  0
  9 40  1  6
  8 38  1  0
  8 39  1  0
  7 37  1  1
  5 33  1  6
  6 34  1  0
  6 35  1  0
  6 36  1  0
  4 32  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
 24 57  1  0
 24 58  1  0
 24 59  1  0
 22 56  1  1
 20 54  1  6
 21 55  1  0
 28 60  1  0
 28 61  1  0
 28 62  1  0
M  END


  Mrv1652309052223002D          

 28 31  0  0  1  0            999 V2000
    5.7158    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5724    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579   -0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  1  6  0  0  0
  8  9  1  0  0  0  0
  9 10  1  1  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 14 13  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  1  1  0  0  0
 15 17  1  0  0  0  0
 17 18  1  6  0  0  0
 18 19  1  0  0  0  0
 17 20  1  0  0  0  0
 20 21  1  1  0  0  0
 22 20  1  6  0  0  0
 22 23  1  0  0  0  0
  7 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
  3 25  1  0  0  0  0
 25 26  2  0  0  0  0
 22 27  1  0  0  0  0
 14 27  1  0  0  0  0
  9 27  1  0  0  0  0
 27 28  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0219876

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CO[C@H]1[C@H](C)[C@@H]2CC(O)O[C@@H]3C[C@H]4[C@H](C)C=C(OC)C(=O)[C@]4(C)[C@@H]([C@@H]1O)[C@]23C

> <INCHI_IDENTIFIER>
InChI=1S/C22H34O6/c1-10-7-14(26-5)20(25)22(4)12(10)8-15-21(3)13(9-16(23)28-15)11(2)18(27-6)17(24)19(21)22/h7,10-13,15-19,23-24H,8-9H2,1-6H3/t10-,11-,12+,13+,15-,16?,17-,18+,19+,21-,22+/m1/s1

> <INCHI_KEY>
OSPJTHRYXNDDDB-ULRVBVHISA-N

> <FORMULA>
C22H34O6

> <MOLECULAR_WEIGHT>
394.508

> <EXACT_MASS>
394.235538815

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
62

> <JCHEM_AVERAGE_POLARIZABILITY>
43.03331424919858

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2S,6S,7S,9R,13S,14R,15S,16S,17S)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadec-4-en-3-one

> <JCHEM_LOGP>
1.7354415709999986

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.906602915824081

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.441838702515547

> <JCHEM_PKA_STRONGEST_BASIC>
-3.2839341874537267

> <JCHEM_POLAR_SURFACE_AREA>
85.22

> <JCHEM_REFRACTIVITY>
105.0047

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2S,6S,7S,9R,13S,14R,15S,16S,17S)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadec-4-en-3-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0      10.669   1.540   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      10.669   0.000   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       9.336  -0.770   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       9.336  -2.310   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.002  -4.620   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       2.667  -3.080   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       0.000  -3.080   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.001   2.310   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       4.001   3.850   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       5.335   4.620   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       6.668   2.310   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       5.335  -0.000   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.668   0.770   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       8.002  -0.000   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       8.002   1.540   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       5.335  -1.540   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   25                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8   23                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   27                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14                                                       
CONECT   14   13   15   27                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   20                                                  
CONECT   18   17   19                                                       
CONECT   19   18                                                            
CONECT   20   17   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23   27                                                  
CONECT   23   22    7   24   25                                             
CONECT   24   23                                                            
CONECT   25   23    3   26                                                  
CONECT   26   25                                                            
CONECT   27   22   14    9   28                                             
CONECT   28   27                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₃₄O₆

Average Mass

394.5080 Da

Monoisotopic Mass

394.23554 Da

IUPAC Name

(1S,2S,6S,7S,9R,13S,14R,15S,16S,17S)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadec-4-en-3-one

Traditional Name

(1S,2S,6S,7S,9R,13S,14R,15S,16S,17S)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadec-4-en-3-one

CAS Registry Number

Not Available

SMILES

CO[C@H]1[C@H](C)[C@@H]2CC(O)O[C@@H]3C[C@H]4[C@H](C)C=C(OC)C(=O)[C@]4(C)[C@@H]([C@@H]1O)[C@]23C

InChI Identifier

InChI=1S/C22H34O6/c1-10-7-14(26-5)20(25)22(4)12(10)8-15-21(3)13(9-16(23)28-15)11(2)18(27-6)17(24)19(21)22/h7,10-13,15-19,23-24H,8-9H2,1-6H3/t10-,11-,12+,13+,15-,16?,17-,18+,19+,21-,22+/m1/s1

InChI Key

OSPJTHRYXNDDDB-ULRVBVHISA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Picrasma javanica	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as quassinoids. These are a group of compounds chemically degraded from triterpenes. According to their basic skeleton, quassinoids are categorized into five distinct groups, C-18, C-19, C-20, C-22 and C-25 types. The C-20 quassinoids can be further classified into two types, tetracyclic and the pentacyclic. The tetracyclic variety does not have oxygenation at C-20, while the pentacyclic quassinoids possess additional oxygenation at C-20 that allows for the formation of an additional ring.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Quassinoids

Alternative Parents

Substituents

Triterpenoid
Polycyclic triterpenoid
Quassinoid
Naphthopyran
Naphthalene
Cyclohexenone
Oxane
Pyran
Cyclic alcohol
Secondary alcohol
Ketone
Hemiacetal
Ether
Dialkyl ether
Oxacycle
Organoheterocyclic compound
Hydrocarbon derivative
Alcohol
Organooxygen compound
Organic oxide
Organic oxygen compound
Carbonyl group
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.74	ChemAxon
pKa (Strongest Acidic)	12.44	ChemAxon
pKa (Strongest Basic)	-3.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	85.22 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	105 m³·mol⁻¹	ChemAxon
Polarizability	43.03 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

10395356

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

21770748

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Choi HG, Song JH, Park M, Kim S, Kim CE, Kang KS, Shim SH: Neuroprotective gamma-Pyrones from Fusarium Solani JS-0169: Cell-Based Identification of Active Compounds and an Informatics Approach to Predict the Mechanism of Action. Biomolecules. 2020 Jan 6;10(1). pii: biom10010091. doi: 10.3390/biom10010091. [PubMed:31935895 ]
Kehelpannala C, Kumar NS, Jayasinghe L, Araya H, Fujimoto Y: Naphthoquinone Metabolites Produced by Monacrosporium ambrosium, the Ectosymbiotic Fungus of Tea Shot-Hole Borer, Euwallacea fornicatus, in Stems of Tea, Camellia sinensis. J Chem Ecol. 2018 Jan;44(1):95-101. doi: 10.1007/s10886-017-0913-1. Epub 2018 Jan 2. [PubMed:29292470 ]
Shah A, Rather MA, Hassan QP, Aga MA, Mushtaq S, Shah AM, Hussain A, Baba SA, Ahmad Z: Discovery of anti-microbial and anti-tubercular molecules from Fusarium solani: an endophyte of Glycyrrhiza glabra. J Appl Microbiol. 2017 May;122(5):1168-1176. doi: 10.1111/jam.13410. Epub 2017 Apr 4. [PubMed:28150900 ]
LOTUS database [Link]

Showing NP-Card for (1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one (NP0219876)

MOL for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

3D MOL for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

3D SDF for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

3D-SDF for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

PDB for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

3D PDB for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

SMILES for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

INCHI for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

Structure for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)

3D Structure for NP0219876 ((1s,2s,6s,7s,9r,13s,14r,15s,16s,17s)-11,16-dihydroxy-4,15-dimethoxy-2,6,14,17-tetramethyl-10-oxatetracyclo[7.7.1.0²,⁷.0¹³,¹⁷]heptadec-4-en-3-one)