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Record Information
Version2.0
Created at2022-09-05 17:29:06 UTC
Updated at2022-09-05 17:29:06 UTC
NP-MRD IDNP0217209
Secondary Accession NumbersNone
Natural Product Identification
Common Name3,6-bis(hydroxymethyl)-3-[(2s,3r,4s,5r,6r)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)oxan-2-yl]-1,4-dioxane-2,5-dione
DescriptionMonogalactosyl diglyceride belongs to the class of organic compounds known as c-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a C-glycosidic bond. 3,6-bis(hydroxymethyl)-3-[(2s,3r,4s,5r,6r)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)oxan-2-yl]-1,4-dioxane-2,5-dione is found in Allium sativum. 3,6-bis(hydroxymethyl)-3-[(2s,3r,4s,5r,6r)-2,3,4,5-tetrahydroxy-6-(hydroxymethyl)oxan-2-yl]-1,4-dioxane-2,5-dione was first documented in 2004 (PMID: 15623345). Based on a literature review a significant number of articles have been published on monogalactosyl diglyceride (PMID: 32551438) (PMID: 32486049) (PMID: 29487228) (PMID: 26648950) (PMID: 21216918) (PMID: 19447192).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC12H18O12
Average Mass354.2640 Da
Monoisotopic Mass354.07983 Da
IUPAC NameNot Available
Traditional NameNot Available
CAS Registry NumberNot Available
SMILES
OC[C@H]1O[C@@](O)([C@H](O)[C@@H](O)[C@H]1O)C1(CO)OC(=O)C(CO)OC1=O
InChI Identifier
InChI=1S/C12H18O12/c13-1-4-6(16)7(17)8(18)12(21,23-4)11(3-15)10(20)22-5(2-14)9(19)24-11/h4-8,13-18,21H,1-3H2/t4-,5?,6+,7+,8-,11?,12+/m1/s1
InChI KeyKBQXKJGFQODGHT-LAOYOORDSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Allium sativumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as c-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a C-glycosidic bond.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentC-glycosyl compounds
Alternative Parents
Substituents
  • C-glycosyl compound
  • Oxane
  • Monosaccharide
  • Dicarboxylic acid or derivatives
  • Para-dioxane
  • Secondary alcohol
  • Lactone
  • Hemiacetal
  • Carboxylic acid ester
  • Oxacycle
  • Organoheterocyclic compound
  • Polyol
  • Carboxylic acid derivative
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Carbonyl group
  • Alcohol
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID65328876
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound129628330
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Min B, Salt L, Wilde P, Kosik O, Hassall K, Przewieslik-Allen A, Burridge AJ, Poole M, Snape J, Wingen L, Haslam R, Griffiths S, Shewry PR: Genetic variation in wheat grain quality is associated with differences in the galactolipid content of flour and the gas bubble properties of dough liquor. Food Chem X. 2020 Jun 2;6:100093. doi: 10.1016/j.fochx.2020.100093. eCollection 2020 Jun 30. [PubMed:32551438 ]
  2. -Chen J, Li WQ, Jia YX: The Serine Carboxypeptidase-Like Gene SCPL41 Negatively Regulates Membrane Lipid Metabolism in Arabidopsis thaliana. Plants (Basel). 2020 May 29;9(6):696. doi: 10.3390/plants9060696. [PubMed:32486049 ]
  3. Caspy I, Nelson N: Structure of the plant photosystem I. Biochem Soc Trans. 2018 Apr 17;46(2):285-294. doi: 10.1042/BST20170299. Epub 2018 Feb 27. [PubMed:29487228 ]
  4. Jia Y, Li W: Characterisation of Lipid Changes in Ethylene-Promoted Senescence and Its Retardation by Suppression of Phospholipase Ddelta in Arabidopsis Leaves. Front Plant Sci. 2015 Nov 30;6:1045. doi: 10.3389/fpls.2015.01045. eCollection 2015. [PubMed:26648950 ]
  5. Gontia I, Kavita K, Schmid M, Hartmann A, Jha B: Brachybacterium saurashtrense sp. nov., a halotolerant root-associated bacterium with plant growth-promoting potential. Int J Syst Evol Microbiol. 2011 Dec;61(Pt 12):2799-2804. doi: 10.1099/ijs.0.023176-0. Epub 2011 Jan 7. [PubMed:21216918 ]
  6. Amara S, Lafont D, Fiorentino B, Boullanger P, Carriere F, De Caro A: Continuous measurement of galactolipid hydrolysis by pancreatic lipolytic enzymes using the pH-stat technique and a medium chain monogalactosyl diglyceride as substrate. Biochim Biophys Acta. 2009 Oct;1791(10):983-90. doi: 10.1016/j.bbalip.2009.05.002. Epub 2009 May 15. [PubMed:19447192 ]
  7. Kakitani Y, Harada K, Mizoguchi T, Koyama Y: Isotopic replacement of pigments and a lipid in chlorosomes from Chlorobium limicola: characterization of the resultant chlorosomes. Biochemistry. 2007 Jun 5;46(22):6513-24. doi: 10.1021/bi602586g. Epub 2007 May 12. [PubMed:17497832 ]
  8. Fewou SN, Bussow H, Schaeren-Wiemers N, Vanier MT, Macklin WB, Gieselmann V, Eckhardt M: Reversal of non-hydroxy:alpha-hydroxy galactosylceramide ratio and unstable myelin in transgenic mice overexpressing UDP-galactose:ceramide galactosyltransferase. J Neurochem. 2005 Jul;94(2):469-81. doi: 10.1111/j.1471-4159.2005.03221.x. [PubMed:15998297 ]
  9. Klinger P, Arellano JB, Vacha F, Hala J, Psencik J: Effect of carotenoids and monogalactosyl diglyceride on bacteriochlorophyll c aggregates in aqueous buffer: implications for the self-assembly of chlorosomes. Photochem Photobiol. 2004 Nov-Dec;80(3):572-8. doi: 10.1562/0031-8655(2004)080<0572:EOCAMD>2.0.CO;2. [PubMed:15623345 ]
  10. LOTUS database [Link]