NP-MRD: Showing NP-Card for (2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid (NP0216520)

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Record Information

Version

2.0

Created at

2022-09-05 16:31:24 UTC

Updated at

2022-09-05 16:31:24 UTC

NP-MRD ID

NP0216520

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid

Description

SCHEMBL8193481 belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol. (2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid is found in Patiria pectinifera. Based on a literature review very few articles have been published on SCHEMBL8193481.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052218312D          

 59 59  0  0  1  0            999 V2000
    8.5737  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0039  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7184  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4328  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1473  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.8618  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.5762  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.2907  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0052  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7197  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.4341  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.1486  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.8631  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.5775  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.2920  -16.5000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   24.2920  -17.3250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.0065  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.0065  -15.2625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.7210  -16.5000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   26.4354  -16.0875    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   27.1499  -16.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.8644  -16.0875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   28.5788  -16.5000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   29.2933  -16.0875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.0078  -16.5000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   30.7223  -16.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.4367  -16.5000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.0078  -17.3250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   30.7223  -17.7375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   29.2933  -17.7375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   29.2933  -18.5625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   28.5788  -17.3250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   27.8644  -17.7375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.4354  -15.2625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   25.7210  -14.8500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   27.1499  -14.8500    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   27.8644  -15.2625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   27.1499  -14.0250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.8644  -13.6125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.8644  -12.7875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.5788  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.5788  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.2933  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.2933  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.0078   -9.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.0078   -9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.7223   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.7223   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.4367   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.4367   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   32.1512   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
 25 26  1  4  0  0  0
 25 27  2  0  0  0  0
 28 27  1  6  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 31 30  1  6  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  6  0  0  0
 34 35  1  0  0  0  0
 33 36  1  0  0  0  0
 36 37  1  1  0  0  0
 36 38  1  0  0  0  0
 38 39  1  6  0  0  0
 38 40  1  0  0  0  0
 31 40  1  0  0  0  0
 40 41  1  1  0  0  0
 28 42  1  0  0  0  0
 42 43  1  6  0  0  0
 42 44  1  0  0  0  0
 44 45  1  1  0  0  0
 44 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
 57 58  1  0  0  0  0
 57 59  1  0  0  0  0
M  END

     RDKit          3D

154154  0  0  0  0  0  0  0  0999 V2000
   16.6492    2.5501   -1.5712 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.0395    2.7343   -2.9498 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5747    2.2707   -2.9087 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.8066    3.0881   -1.9210 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3723    2.7094   -1.7752 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1765    1.2824   -1.2939 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8467    1.1610    0.0592 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7513   -0.1740    0.6650 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4839   -0.8304    0.9484 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.5009   -0.2624    1.8902 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8919    1.0456    1.4909 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9082    1.3973    2.6033 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1518    2.6379    2.4158 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2998    2.8650    1.2478 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1700    1.9306    0.9814 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4979    0.5339    0.6284 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2878   -0.3706    0.4259 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4370    0.1540   -0.6762 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2800   -0.8164   -0.8831 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4261   -0.9499    0.3204 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3448   -1.9469    0.1020 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3715   -1.7141   -0.9764 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4659   -0.4914   -0.9158 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3308   -0.5138   -2.0331 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1649   -0.2111    0.3255 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6231    0.8887    1.0838 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1478   -0.7437    0.8703 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9720   -1.8544    0.4740 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3627   -3.0943    1.1306 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9697   -4.2716    0.8550 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0060   -4.6723   -0.4463 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.2192   -5.0870   -0.9382 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7392   -6.2456   -0.4563 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.5592   -5.9922    0.8182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0902   -7.1624    1.3122 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8157   -7.4006   -0.2865 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5391   -8.0155   -1.4803 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5076   -6.9878    0.3456 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6558   -6.6116    1.6687 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9888   -5.8514   -0.5054 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.7443   -6.2182   -1.8008 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3864   -1.6769    1.0103 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.2254   -2.7394    0.7185 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0121   -0.3571    0.6929 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.1566   -0.2239    1.4837 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4563   -0.1774   -0.7248 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4658   -1.1266   -1.2240 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7765   -1.2012   -0.5759 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6487    0.0259   -0.6043 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9053   -0.3446    0.1370 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.9482    0.7768    0.1802 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3844    1.1488   -1.1795 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4549    2.1437   -1.2876 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3025    3.5175   -0.8562 C   0  0  0  0  0  0  0  0  0  0  0  0
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   16.2702    1.6211   -1.0904 H   0  0  0  0  0  0  0  0  0  0  0  0
   17.7373    2.5634   -1.6545 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.6392    2.1442   -3.6613 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.1254    3.7820   -3.2372 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.5669    1.1987   -2.7246 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.1988    2.4416   -3.9513 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8063    4.1581   -2.2849 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.3171    3.1343   -0.9233 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.8208    2.8676   -2.7098 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.9615    3.3488   -0.9466 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.0929    1.1310   -1.1420 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.5203    0.5452   -2.0306 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.6481    2.0428    0.6447 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.9894    1.2769   -0.1756 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.3934   -0.1709    1.6174 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.3464   -0.9001   -0.0036 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.7416   -1.8829    1.3203 H   0  0  0  0  0  0  0  0  0  0  0  0
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    9.6444   -1.0040    2.0610 H   0  0  0  0  0  0  0  0  0  0  0  0
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    9.6541    1.5721    3.4952 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.5165    2.4085    0.1851 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5327    1.8943    1.9186 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9716    0.5753   -0.4202 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2095   -0.0105    1.2204 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.7116   -1.3802    0.1619 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9624    0.2344   -1.6405 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0416    1.1544   -0.3759 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6515   -0.4662   -1.7281 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309052218312D          

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M  END
> <DATABASE_ID>
NP0216520

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCCCCCCCCCCCCCCCCCC[C@@H](O)C(O)=N[C@@H](CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)[C@H](O)[C@H](O)CCCCCCCCCCCC(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C48H95NO10/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-22-26-29-32-35-41(52)47(57)49-39(37-58-48-46(56)45(55)44(54)42(36-50)59-48)43(53)40(51)34-31-28-25-23-20-21-24-27-30-33-38(2)3/h38-46,48,50-56H,4-37H2,1-3H3,(H,49,57)/t39-,40+,41+,42+,43-,44+,45-,46+,48+/m0/s1

> <INCHI_KEY>
ZFKNVPCSUNCEDZ-JWCXELGHSA-N

> <FORMULA>
C48H95NO10

> <MOLECULAR_WEIGHT>
846.285

> <EXACT_MASS>
845.695598263

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
154

> <JCHEM_AVERAGE_POLARIZABILITY>
107.83684264427924

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
8

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R)-N-[(2S,3S,4R)-3,4-dihydroxy-16-methyl-1-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid

> <JCHEM_LOGP>
11.573168045333333

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.18622544674272

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.9500296344013566

> <JCHEM_PKA_STRONGEST_BASIC>
1.7288095083121404

> <JCHEM_POLAR_SURFACE_AREA>
192.65999999999997

> <JCHEM_REFRACTIVITY>
237.35740000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
41

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-N-[(2S,3S,4R)-3,4-dihydroxy-16-methyl-1-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0      16.004 -30.800   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      17.338 -30.030   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      18.672 -30.800   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      20.005 -30.030   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      21.339 -30.800   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      22.673 -30.030   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      24.006 -30.800   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      25.340 -30.030   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      26.674 -30.800   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      28.007 -30.030   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      29.341 -30.800   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      30.675 -30.030   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      32.008 -30.800   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      33.342 -30.030   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      34.676 -30.800   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      36.009 -30.030   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      37.343 -30.800   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      38.677 -30.030   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      40.010 -30.800   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      41.344 -30.030   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      42.678 -30.800   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      44.011 -30.030   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      45.345 -30.800   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      45.345 -32.340   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      46.679 -30.030   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      46.679 -28.490   0.000  0.00  0.00           O+0
HETATM   27  N   UNK     0      48.012 -30.800   0.000  0.00  0.00           N+0
HETATM   28  C   UNK     0      49.346 -30.030   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      50.680 -30.800   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      52.013 -30.030   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      53.347 -30.800   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      54.681 -30.030   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0      56.015 -30.800   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      57.348 -30.030   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      58.682 -30.800   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      56.015 -32.340   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      57.348 -33.110   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      54.681 -33.110   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0      54.681 -34.650   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0      53.347 -32.340   0.000  0.00  0.00           C+0
HETATM   41  O   UNK     0      52.013 -33.110   0.000  0.00  0.00           O+0
HETATM   42  C   UNK     0      49.346 -28.490   0.000  0.00  0.00           C+0
HETATM   43  O   UNK     0      48.012 -27.720   0.000  0.00  0.00           O+0
HETATM   44  C   UNK     0      50.680 -27.720   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0      52.013 -28.490   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0      50.680 -26.180   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      52.013 -25.410   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      52.013 -23.870   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      53.347 -23.100   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      53.347 -21.560   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      54.681 -20.790   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0      54.681 -19.250   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      56.015 -18.480   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      56.015 -16.940   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      57.348 -16.170   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0      57.348 -14.630   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      58.682 -13.860   0.000  0.00  0.00           C+0
HETATM   58  C   UNK     0      58.682 -12.320   0.000  0.00  0.00           C+0
HETATM   59  C   UNK     0      60.016 -14.630   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28                                                       
CONECT   28   27   29   42                                                  
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32   40                                                  
CONECT   32   31   33                                                       
CONECT   33   32   34   36                                                  
CONECT   34   33   35                                                       
CONECT   35   34                                                            
CONECT   36   33   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38   31   41                                                  
CONECT   41   40                                                            
CONECT   42   28   43   44                                                  
CONECT   43   42                                                            
CONECT   44   42   45   46                                                  
CONECT   45   44                                                            
CONECT   46   44   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54   56                                                       
CONECT   56   55   57                                                       
CONECT   57   56   58   59                                                  
CONECT   58   57                                                            
CONECT   59   57                                                            
MASTER        0    0    0    0    0    0    0    0   59    0  118    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₄₈H₉₅NO₁₀

Average Mass

846.2850 Da

Monoisotopic Mass

845.69560 Da

IUPAC Name

(2R)-N-[(2S,3S,4R)-3,4-dihydroxy-16-methyl-1-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid

Traditional Name

(2R)-N-[(2S,3S,4R)-3,4-dihydroxy-16-methyl-1-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid

CAS Registry Number

Not Available

SMILES

CCCCCCCCCCCCCCCCCCCCCC[C@@H](O)C(O)=N[C@@H](CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)[C@H](O)[C@H](O)CCCCCCCCCCCC(C)C

InChI Identifier

InChI=1S/C48H95NO10/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-22-26-29-32-35-41(52)47(57)49-39(37-58-48-46(56)45(55)44(54)42(36-50)59-48)43(53)40(51)34-31-28-25-23-20-21-24-27-30-33-38(2)3/h38-46,48,50-56H,4-37H2,1-3H3,(H,49,57)/t39-,40+,41+,42+,43-,44+,45-,46+,48+/m0/s1

InChI Key

ZFKNVPCSUNCEDZ-JWCXELGHSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Asterina pectinifera	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as fatty acyl glycosides of mono- and disaccharides. Fatty acyl glycosides of mono- and disaccharides are compounds composed of a mono- or disaccharide moiety linked to one hydroxyl group of a fatty alcohol or of a phosphorylated alcohol (phosphoprenols), a hydroxy fatty acid or to one carboxyl group of a fatty acid (ester linkage) or to an amino alcohol.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acyl glycosides

Direct Parent

Fatty acyl glycosides of mono- and disaccharides

Alternative Parents

Substituents

Fatty acyl glycoside of mono- or disaccharide
Alkyl glycoside
Hexose monosaccharide
Glycosyl compound
O-glycosyl compound
Fatty amide
Monosaccharide
N-acyl-amine
Oxane
Carboxamide group
Secondary carboxylic acid amide
Secondary alcohol
Acetal
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Polyol
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Alcohol
Organic oxygen compound
Organic nitrogen compound
Primary alcohol
Carbonyl group
Organonitrogen compound
Organooxygen compound
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	11.57	ChemAxon
pKa (Strongest Acidic)	3.95	ChemAxon
pKa (Strongest Basic)	1.73	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	8	ChemAxon
Polar Surface Area	192.66 Å²	ChemAxon
Rotatable Bond Count	41	ChemAxon
Refractivity	237.36 m³·mol⁻¹	ChemAxon
Polarizability	107.84 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

29216774

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

14586591

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid (NP0216520)

MOL for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

3D MOL for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

3D SDF for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

3D-SDF for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

PDB for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

3D PDB for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

SMILES for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

INCHI for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

Structure for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)

3D Structure for NP0216520 ((2r)-n-[(2s,3s,4r)-3,4-dihydroxy-16-methyl-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}heptadecan-2-yl]-2-hydroxytetracosanimidic acid)