NP-MRD: Showing NP-Card for (3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione (NP0216505)

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Record Information

Version

2.0

Created at

2022-09-05 16:30:12 UTC

Updated at

2022-09-05 16:30:12 UTC

NP-MRD ID

NP0216505

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione

Description

Rustmicin, also known as galbonolide, belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members. (3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione is found in Micromonospora chalcea. (3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione was first documented in 2003 (PMID: 12941304). Based on a literature review a small amount of articles have been published on Rustmicin (PMID: 19047657) (PMID: 15569002).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052218302D          

 27 27  0  0  1  0            999 V2000
    1.6223   -0.5848    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1140   -1.2472    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7862   -2.0043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9666   -2.0989    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6388   -2.8560    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4749   -1.4365    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3447   -1.5311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6725   -2.2882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8027   -0.6794    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3110   -0.0170    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5086   -0.1116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6388    0.7401    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.1471    1.4025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4584    0.8347    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9501    0.1723    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7862    1.5918    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9837    1.7832    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8353    2.4153    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5731    2.7846    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6057    1.6864    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0975    1.0240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9170    1.1186    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2448    1.8757    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7696    0.2669    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2614   -0.3955    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0809   -0.3009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9336   -1.1526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  1  0  0  0
  7  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  6  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  6  0  0  0
 18 19  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 21 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  1  0  0  0
 25 27  1  0  0  0  0
  2 27  1  0  0  0  0
M  END

     RDKit          3D

 59 59  0  0  0  0  0  0  0  0999 V2000
    2.3332   -2.3230   -1.5865 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8307   -1.7332   -0.5118 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5770   -1.6968    0.7017 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9549   -0.6314    1.3819 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7239   -0.8953    2.6523 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6663    0.7596    0.9935 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9834    1.1415   -0.4101 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3283    0.5321   -0.8361 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5186    1.1987    1.5666 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5861    2.1278    1.4498 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3400    2.9677    2.3572 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2630    2.2776    0.2466 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5384    3.7695    0.0186 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6276    1.6507    0.4238 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0850    1.4473    1.5198 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3801    1.2968   -0.7806 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7784    1.8738   -1.9348 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7363    1.9748   -0.7041 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4650    1.5353    0.3745 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4759   -0.1791   -1.0870 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5463   -1.0704    0.0556 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5845   -0.8423    0.9857 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7746   -1.7787    2.0289 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7011   -2.0437    0.2353 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6171   -2.2792   -0.7385 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0289   -2.7402   -2.0851 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4436   -1.1812   -0.7229 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3236   -2.7814   -1.6235 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8011   -2.4051   -2.5337 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8996   -2.6657    1.1415 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4865   -0.0818    2.7497 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2689   -1.8404    2.6038 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0488   -0.8090    3.5385 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5011    1.3305    1.5563 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1766    2.2572   -0.4281 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2933    0.9003   -1.1931 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3739    0.4583   -1.9404 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4190   -0.4394   -0.3346 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1460    1.1733   -0.4390 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1645    1.8122   -0.6488 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5117    4.0648    0.4937 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2433    4.3792    0.5019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6039    4.0195   -1.0401 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0580    1.2378   -2.1818 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3175    1.7943   -1.6352 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5495    3.0631   -0.5538 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3149    2.1070    1.1564 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8193   -0.4588   -1.9119 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5126   -0.2653   -1.5728 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8758   -1.8792    2.6783 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9704   -2.7637    1.5120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6799   -1.5154    2.6094 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8152   -2.6917    1.1371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0328   -3.1579   -0.2903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7235   -3.8117   -2.2947 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5511   -2.1912   -2.9412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1514   -2.7996   -2.2122 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5119   -0.6175   -1.6565 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1454   -0.5813    0.1591 H   0  0  0  0  0  0  0  0  0  0  0  0
  8  7  1  0
  7  6  1  0
  6  9  1  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  1  6
 16 18  1  0
 18 19  1  0
 16 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 21 24  2  0
 24 25  1  0
 25 26  1  0
 25 27  1  0
 27  2  1  0
  2  1  2  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  4  6  1  0
  8 37  1  0
  8 38  1  0
  8 39  1  0
  7 35  1  0
  7 36  1  0
  6 34  1  1
 12 40  1  6
 13 41  1  0
 13 42  1  0
 13 43  1  0
 17 44  1  0
 18 45  1  0
 18 46  1  0
 19 47  1  0
 20 48  1  0
 20 49  1  0
 23 50  1  0
 23 51  1  0
 23 52  1  0
 24 53  1  0
 25 54  1  1
 26 55  1  0
 26 56  1  0
 26 57  1  0
 27 58  1  0
 27 59  1  0
  1 28  1  0
  1 29  1  0
  3 30  1  0
  5 31  1  0
  5 32  1  0
  5 33  1  0
M  END


  Mrv1652309052218302D          

 27 27  0  0  1  0            999 V2000
    1.6223   -0.5848    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1140   -1.2472    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7862   -2.0043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9666   -2.0989    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6388   -2.8560    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4749   -1.4365    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3447   -1.5311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6725   -2.2882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8027   -0.6794    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3110   -0.0170    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5086   -0.1116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6388    0.7401    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.1471    1.4025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4584    0.8347    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9501    0.1723    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7862    1.5918    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9837    1.7832    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8353    2.4153    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5731    2.7846    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6057    1.6864    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0975    1.0240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9170    1.1186    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2448    1.8757    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7696    0.2669    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2614   -0.3955    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0809   -0.3009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9336   -1.1526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  1  0  0  0
  7  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  6  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  6  0  0  0
 18 19  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 21 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  1  0  0  0
 25 27  1  0  0  0  0
  2 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0216505

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC[C@H]1OC(=O)[C@H](C)C(=O)[C@](O)(CO)C\C(OC)=C\[C@@H](C)CC(=C)\C=C1\C

> <INCHI_IDENTIFIER>
InChI=1S/C21H32O6/c1-7-18-15(4)9-13(2)8-14(3)10-17(26-6)11-21(25,12-22)19(23)16(5)20(24)27-18/h9-10,14,16,18,22,25H,2,7-8,11-12H2,1,3-6H3/b15-9-,17-10-/t14-,16+,18+,21+/m0/s1

> <INCHI_KEY>
WOFFENQLRMDHKE-VMITXNAGSA-N

> <FORMULA>
C21H32O6

> <MOLECULAR_WEIGHT>
380.481

> <EXACT_MASS>
380.21988875

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
59

> <JCHEM_AVERAGE_POLARIZABILITY>
41.049517280163094

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(3R,5R,7Z,9S,12Z,14R)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione

> <JCHEM_LOGP>
2.595356450333332

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.742111797358351

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.321333269560004

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1479787620314745

> <JCHEM_POLAR_SURFACE_AREA>
93.06000000000002

> <JCHEM_REFRACTIVITY>
105.66659999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(3R,5R,7Z,9S,12Z,14R)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0       3.028  -1.092   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.946  -2.328   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.334  -3.741   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.804  -3.918   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.192  -5.331   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.886  -2.681   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.643  -2.858   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.255  -4.271   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       1.498  -1.268   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       0.580  -0.032   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      -0.949  -0.208   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       1.192   1.382   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.275   2.618   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.722   1.558   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       3.640   0.322   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       3.334   2.971   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       1.836   3.329   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       3.426   4.509   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       4.803   5.198   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       4.864   3.148   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       5.782   1.911   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       7.312   2.088   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       7.924   3.501   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       5.170   0.498   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.088  -0.738   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       7.618  -0.562   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       5.476  -2.152   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   27                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7    9                                                  
CONECT    7    6    8                                                       
CONECT    8    7                                                            
CONECT    9    6   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17   18   20                                             
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18                                                            
CONECT   20   16   21                                                       
CONECT   21   20   22   24                                                  
CONECT   22   21   23                                                       
CONECT   23   22                                                            
CONECT   24   21   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25    2                                                       
MASTER        0    0    0    0    0    0    0    0   27    0   54    0
END

View in JSmol

Synonyms

Value	Source
Galbonolide	MeSH
Galbonolide a	MeSH

Chemical Formula

C₂₁H₃₂O₆

Average Mass

380.4810 Da

Monoisotopic Mass

380.21989 Da

IUPAC Name

(3R,5R,7Z,9S,12Z,14R)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione

Traditional Name

(3R,5R,7Z,9S,12Z,14R)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione

CAS Registry Number

Not Available

SMILES

CC[C@H]1OC(=O)[C@H](C)C(=O)[C@](O)(CO)C\C(OC)=C\[C@@H](C)CC(=C)\C=C1\C

InChI Identifier

InChI=1S/C21H32O6/c1-7-18-15(4)9-13(2)8-14(3)10-17(26-6)11-21(25,12-22)19(23)16(5)20(24)27-18/h9-10,14,16,18,22,25H,2,7-8,11-12H2,1,3-6H3/b15-9-,17-10-/t14-,16+,18+,21+/m0/s1

InChI Key

WOFFENQLRMDHKE-VMITXNAGSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Micromonospora chalcea	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Macrolides and analogues

Sub Class

Not Available

Direct Parent

Macrolides and analogues

Alternative Parents

Substituents

Macrolide
Acyloin
1,3-dicarbonyl compound
Tertiary alcohol
1,2-diol
Carboxylic acid ester
Ketone
Lactone
Cyclic ketone
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Organic oxide
Hydrocarbon derivative
Organic oxygen compound
Carbonyl group
Alcohol
Primary alcohol
Organooxygen compound
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.6	ChemAxon
pKa (Strongest Acidic)	9.32	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	93.06 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	105.67 m³·mol⁻¹	ChemAxon
Polarizability	41.05 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00016091

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101949541

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Aeed PA, Young CL, Nagiec MM, Elhammer AP: Inhibition of inositol phosphorylceramide synthase by the cyclic peptide aureobasidin A. Antimicrob Agents Chemother. 2009 Feb;53(2):496-504. doi: 10.1128/AAC.00633-08. Epub 2008 Dec 1. [PubMed:19047657 ]
Figueiredo JM, Dias WB, Mendonca-Previato L, Previato JO, Heise N: Characterization of the inositol phosphorylceramide synthase activity from Trypanosoma cruzi. Biochem J. 2005 Apr 15;387(Pt 2):519-29. doi: 10.1042/BJ20041842. [PubMed:15569002 ]
Bromley PE, Li YO, Murphy SM, Sumner CM, Lynch DV: Complex sphingolipid synthesis in plants: characterization of inositolphosphorylceramide synthase activity in bean microsomes. Arch Biochem Biophys. 2003 Sep 15;417(2):219-26. doi: 10.1016/s0003-9861(03)00339-4. [PubMed:12941304 ]
LOTUS database [Link]

Showing NP-Card for (3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione (NP0216505)

MOL for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

3D MOL for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

3D SDF for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

3D-SDF for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

PDB for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

3D PDB for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

SMILES for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

INCHI for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

Structure for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)

3D Structure for NP0216505 ((3r,5r,7z,9s,12z,14r)-14-ethyl-5-hydroxy-5-(hydroxymethyl)-7-methoxy-3,9,13-trimethyl-11-methylidene-1-oxacyclotetradeca-7,12-diene-2,4-dione)