| Record Information |
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| Version | 2.0 |
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| Created at | 2022-09-05 15:16:07 UTC |
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| Updated at | 2022-09-05 15:16:07 UTC |
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| NP-MRD ID | NP0215598 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | methyl (2e)-2-[(1r)-1-hydroxy-2-oxopropyl]tridec-2-enoate |
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| Description | Secokotomolide belongs to the class of organic compounds known as long-chain fatty alcohols. These are fatty alcohols that have an aliphatic tail of 13 to 21 carbon atoms. methyl (2e)-2-[(1r)-1-hydroxy-2-oxopropyl]tridec-2-enoate is found in Cinnamomum kotoense. methyl (2e)-2-[(1r)-1-hydroxy-2-oxopropyl]tridec-2-enoate was first documented in 2005 (PMID: 16180806). Based on a literature review a small amount of articles have been published on Secokotomolide (PMID: 33062137) (PMID: 16792412) (PMID: 20198535) (PMID: 17958434). |
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| Structure | CCCCCCCCCC\C=C(/[C@@H](O)C(C)=O)C(=O)OC InChI=1S/C17H30O4/c1-4-5-6-7-8-9-10-11-12-13-15(17(20)21-3)16(19)14(2)18/h13,16,19H,4-12H2,1-3H3/b15-13+/t16-/m0/s1 |
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| Synonyms | Not Available |
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| Chemical Formula | C17H30O4 |
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| Average Mass | 298.4230 Da |
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| Monoisotopic Mass | 298.21441 Da |
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| IUPAC Name | methyl (2E)-2-[(1R)-1-hydroxy-2-oxopropyl]tridec-2-enoate |
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| Traditional Name | methyl (2E)-2-[(1R)-1-hydroxy-2-oxopropyl]tridec-2-enoate |
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| CAS Registry Number | Not Available |
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| SMILES | CCCCCCCCCC\C=C(/[C@@H](O)C(C)=O)C(=O)OC |
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| InChI Identifier | InChI=1S/C17H30O4/c1-4-5-6-7-8-9-10-11-12-13-15(17(20)21-3)16(19)14(2)18/h13,16,19H,4-12H2,1-3H3/b15-13+/t16-/m0/s1 |
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| InChI Key | BEYWPGROMZUINL-MDJJKAFGSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as long-chain fatty alcohols. These are fatty alcohols that have an aliphatic tail of 13 to 21 carbon atoms. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Fatty Acyls |
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| Sub Class | Fatty alcohols |
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| Direct Parent | Long-chain fatty alcohols |
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| Alternative Parents | |
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| Substituents | - Long chain fatty alcohol
- Gamma-keto acid
- Beta-hydroxy acid
- Fatty acid ester
- Acyloin
- Hydroxy acid
- Keto acid
- Alpha-hydroxy ketone
- Alpha,beta-unsaturated carboxylic ester
- Enoate ester
- Methyl ester
- Carboxylic acid ester
- Secondary alcohol
- Ketone
- Carboxylic acid derivative
- Monocarboxylic acid or derivatives
- Alcohol
- Organic oxygen compound
- Carbonyl group
- Hydrocarbon derivative
- Organic oxide
- Organooxygen compound
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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| General References | - Li J, Chen CY, Huang JY, Wang L, Xu Z, Kang W, Lin MH, Wang HD: Isokotomolide A from Cinnamomum kotoense Induce Melanoma Autophagy and Apoptosis In Vivo and In Vitro. Oxid Med Cell Longev. 2020 Sep 26;2020:3425147. doi: 10.1155/2020/3425147. eCollection 2020. [PubMed:33062137 ]
- Chen CH, Lo WL, Liu YC, Chen CY: Chemical and cytotoxic constituents from the leaves of Cinnamomum kotoense. J Nat Prod. 2006 Jun;69(6):927-33. doi: 10.1021/np060107l. [PubMed:16792412 ]
- Cheng MJ, Wang TA, Lee SJ, Chen IS: A new butanolide and a new secobutanolide from Litsea lii var. nunkao-tahangensis. Nat Prod Res. 2010 Apr;24(7):647-56. doi: 10.1080/14786410903098277. [PubMed:20198535 ]
- Lee SI, Hwang GS, Shin SC, Lee TG, Jo RH, Ryu DH: A highly E-stereoselective approach to beta-iodo Morita-Baylis-Hillman esters: synthesis of secokotomolide A. Org Lett. 2007 Nov 22;9(24):5087-9. doi: 10.1021/ol702134w. Epub 2007 Oct 25. [PubMed:17958434 ]
- Chen FC, Peng CF, Tsai IL, Chen IS: Antitubercular constituents from the stem wood of Cinnamomum kotoense. J Nat Prod. 2005 Sep;68(9):1318-23. doi: 10.1021/np0580210. [PubMed:16180806 ]
- LOTUS database [Link]
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