NP-MRD: Showing NP-Card for (2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione (NP0214436)

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Record Information

Version

2.0

Created at

2022-09-05 13:44:07 UTC

Updated at

2022-09-05 13:44:07 UTC

NP-MRD ID

NP0214436

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione

Description

(Z)-1,4-Bis(4-hydroxyphenyl)-2,3-dimethyl-2-butene-1,4-dione belongs to the class of organic compounds known as lignans, neolignans and related compounds. These are plant products of low molecular weight formed primarily from oxidative coupling of two p-propylphenol moieties. They can also be described as micromolecules with two phenylpropanoid units coupled together. They can be attached in various manners, like C5-C5', C8-C8'. Most known natural lignans are oxidized at C9 and C9´ and, based upon the way in which oxygen is incorporated into the skeleton and on the cyclization patterns, a wide range of lignans of very different structural types can be formed. (2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione is found in Larrea tridentata. Based on a literature review very few articles have been published on (Z)-1,4-Bis(4-hydroxyphenyl)-2,3-dimethyl-2-butene-1,4-dione.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 38 39  0  0  0  0  0  0  0  0999 V2000
    1.3973   -0.6119    2.0626 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6688   -0.2029    0.7910 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4117   -0.1645   -0.4364 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8068   -0.2130   -1.5669 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8437   -0.0708   -0.5579 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7008    0.2817    0.4359 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0947    0.2742    0.2573 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6290   -0.0896   -0.9348 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9986   -0.1159   -1.1691 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8021   -0.4529   -1.9737 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4512   -0.4379   -1.7728 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6505   -0.1232    0.8551 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2614   -0.4635    2.1908 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4395    0.4612   -0.1827 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8855    1.0786   -1.1696 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8991    0.4547   -0.2918 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5329    1.2840   -1.2245 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8899    1.2824   -1.4309 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7029    0.4427   -0.7093 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0930    0.4282   -0.9065 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0992   -0.3780    0.2088 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7122   -0.3808    0.4229 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7396   -1.3624    2.5964 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5832    0.1901    2.7417 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2745   -1.1958    1.7378 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3720    0.6390    1.4047 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7536    0.5614    1.0783 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6853    0.1304   -0.4785 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2467   -0.7440   -2.9328 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8326   -0.7291   -2.6068 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4276   -1.5003    2.3637 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1385    0.2339    2.3374 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5600   -0.0737    2.9857 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9514    1.9871   -1.8423 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3307    1.9439   -2.1649 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6445   -0.2032   -0.3549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7136   -1.0572    0.7992 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3600   -1.1029    1.1432 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2 12  2  0
 12 13  1  0
 12 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 19 21  1  0
 21 22  2  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  8 10  1  0
 10 11  2  0
 22 16  1  0
 11  5  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
 13 31  1  0
 13 32  1  0
 13 33  1  0
 17 34  1  0
 18 35  1  0
 20 36  1  0
 21 37  1  0
 22 38  1  0
  6 26  1  0
  7 27  1  0
  9 28  1  0
 10 29  1  0
 11 30  1  0
M  END


  Mrv1652309052215442D          

 22 23  0  0  0  0            999 V2000
    2.1434   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -6.1875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  8 10  1  0  0  0  0
 10 11  2  0  0  0  0
  5 11  1  0  0  0  0
  2 12  2  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 16 22  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0214436

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C\C(=C(/C)C(=O)C1=CC=C(O)C=C1)C(=O)C1=CC=C(O)C=C1

> <INCHI_IDENTIFIER>
InChI=1S/C18H16O4/c1-11(17(21)13-3-7-15(19)8-4-13)12(2)18(22)14-5-9-16(20)10-6-14/h3-10,19-20H,1-2H3/b12-11-

> <INCHI_KEY>
MEZXYSSUYJRMBP-QXMHVHEDSA-N

> <FORMULA>
C18H16O4

> <MOLECULAR_WEIGHT>
296.322

> <EXACT_MASS>
296.104858995

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
38

> <JCHEM_AVERAGE_POLARIZABILITY>
29.78384518490208

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2Z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione

> <JCHEM_LOGP>
3.6515341020000003

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
8.146929652413077

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.544869588043322

> <JCHEM_PKA_STRONGEST_BASIC>
-6.93076134898427

> <JCHEM_POLAR_SURFACE_AREA>
74.6

> <JCHEM_REFRACTIVITY>
84.91720000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2Z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0       4.001  -5.390   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.667  -4.620   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.334  -5.390   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       0.000  -4.620   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       1.334  -6.930   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.667  -7.700   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.667  -9.240   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334 -10.010   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       1.334 -11.550   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       0.000  -9.240   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.000  -7.700   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       0.000  -3.080   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       1.334   3.850   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   12                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   11                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10    5                                                       
CONECT   12    2   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17   22                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   16                                                       
MASTER        0    0    0    0    0    0    0    0   22    0   46    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₈H₁₆O₄

Average Mass

296.3220 Da

Monoisotopic Mass

296.10486 Da

IUPAC Name

(2Z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione

Traditional Name

(2Z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione

CAS Registry Number

Not Available

SMILES

C\C(=C(/C)C(=O)C1=CC=C(O)C=C1)C(=O)C1=CC=C(O)C=C1

InChI Identifier

InChI=1S/C18H16O4/c1-11(17(21)13-3-7-15(19)8-4-13)12(2)18(22)14-5-9-16(20)10-6-14/h3-10,19-20H,1-2H3/b12-11-

InChI Key

MEZXYSSUYJRMBP-QXMHVHEDSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Larrea tridentata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as lignans, neolignans and related compounds. These are plant products of low molecular weight formed primarily from oxidative coupling of two p-propylphenol moieties. They can also be described as micromolecules with two phenylpropanoid units coupled together. They can be attached in various manners, like C5-C5', C8-C8'. Most known natural lignans are oxidized at C9 and C9´ and, based upon the way in which oxygen is incorporated into the skeleton and on the cyclization patterns, a wide range of lignans of very different structural types can be formed.

Kingdom

Organic compounds

Super Class

Lignans, neolignans and related compounds

Class

Not Available

Sub Class

Not Available

Direct Parent

Lignans, neolignans and related compounds

Alternative Parents

Substituents

Norlignan skeleton
Phenylpropane
Benzoyl
Aryl ketone
1-hydroxy-2-unsubstituted benzenoid
Phenol
Monocyclic benzene moiety
Alpha-branched alpha,beta-unsaturated-ketone
Benzenoid
Enone
Acryloyl-group
Alpha,beta-unsaturated ketone
Ketone
Hydrocarbon derivative
Organooxygen compound
Organic oxide
Organic oxygen compound
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.65	ChemAxon
pKa (Strongest Acidic)	7.54	ChemAxon
pKa (Strongest Basic)	-6.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	74.6 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	84.92 m³·mol⁻¹	ChemAxon
Polarizability	29.78 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101356830

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione (NP0214436)

MOL for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

3D MOL for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

3D SDF for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

3D-SDF for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

PDB for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

3D PDB for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

SMILES for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

INCHI for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

Structure for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)

3D Structure for NP0214436 ((2z)-1,4-bis(4-hydroxyphenyl)-2,3-dimethylbut-2-ene-1,4-dione)