NP-MRD: Showing NP-Card for {5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate (NP0214020)

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Record Information

Version

2.0

Created at

2022-09-05 13:12:07 UTC

Updated at

2022-09-05 13:12:08 UTC

NP-MRD ID

NP0214020

Secondary Accession Numbers

None

Natural Product Identification

Common Name

{5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate

Description

Acetic acid 5-[4-(2-furanyl)-3-buten-1-ynyl]-2-thienylmethyl ester belongs to the class of organic compounds known as 2,5-disubstituted thiophenes. These are organic compounds containing a thiophene that is disubstituted at the C-2, and C5-positions. {5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate is found in Santolina chamaecyparissus. Based on a literature review very few articles have been published on Acetic acid 5-[4-(2-furanyl)-3-buten-1-ynyl]-2-thienylmethyl ester.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 31 32  0  0  0  0  0  0  0  0999 V2000
    7.5230   -0.5134   -0.9659 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7143   -0.1835    0.2298 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1824    0.0288    1.3668 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3377   -0.1050    0.0739 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4704    0.1970    1.1210 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0662    0.1922    0.5770 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6790   -0.0586   -0.7044 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3581   -0.0097   -0.9745 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5209    0.2880    0.0641 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9359    0.3992    0.0261 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1361    0.4958    0.0159 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5655    0.6128   -0.0211 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3327   -0.4629   -0.0264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8000   -0.3688   -0.0641 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5053    0.8152   -0.0968 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8327    0.4674   -0.1254 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8654   -0.9270   -0.1084 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6269   -1.3844   -0.0717 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5915    0.4897    1.3767 S   0  0  0  0  0  0  0  0  0  0  0  0
    7.6246    0.4278   -1.5540 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9251   -1.2627   -1.5597 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4819   -0.9879   -0.7335 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5601   -0.4809    1.9923 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6854    1.2472    1.4443 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4280   -0.2937   -1.4919 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9063   -0.1936   -1.9766 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0424    1.5911   -0.0454 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8357   -1.4204   -0.0018 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1116    1.8352   -0.1001 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7093    1.0948   -0.1552 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7554   -1.5297   -0.1228 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9 19  1  0
  9 10  1  0
 10 11  3  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 19  6  1  0
 18 14  1  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
  5 23  1  0
  5 24  1  0
  7 25  1  0
  8 26  1  0
 12 27  1  0
 13 28  1  0
 15 29  1  0
 16 30  1  0
 17 31  1  0
M  END


  Mrv1652309052215122D          

 19 20  0  0  0  0            999 V2000
    4.2572   -1.0556    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5427   -1.4681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8282   -1.0556    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5427   -2.2931    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8282   -2.7056    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8282   -3.5306    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4957   -4.0155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2407   -4.8001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4157   -4.8001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9308   -5.4676    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4459   -6.1350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9609   -6.8025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2965   -7.5561    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8116   -8.2236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0665   -9.0082    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3991   -9.4931    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2684   -9.0082    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0134   -8.2236    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1608   -4.0155    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  3  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 14 18  1  0  0  0  0
  9 19  1  0  0  0  0
  6 19  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0214020

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)OCC1=CC=C(S1)C#C\C=C\C1=CC=CO1

> <INCHI_IDENTIFIER>
InChI=1S/C15H12O3S/c1-12(16)18-11-15-9-8-14(19-15)7-3-2-5-13-6-4-10-17-13/h2,4-6,8-10H,11H2,1H3/b5-2+

> <INCHI_KEY>
AHFCUFWQGLAUPN-GORDUTHDSA-N

> <FORMULA>
C15H12O3S

> <MOLECULAR_WEIGHT>
272.32

> <EXACT_MASS>
272.05071542

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
31

> <JCHEM_AVERAGE_POLARIZABILITY>
29.681323730470854

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
{5-[(3E)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate

> <JCHEM_LOGP>
3.483573925999999

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-2.8700815907346238

> <JCHEM_POLAR_SURFACE_AREA>
39.44

> <JCHEM_REFRACTIVITY>
72.177

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
{5-[(3E)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0       7.947  -1.970   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.613  -2.740   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       5.279  -1.970   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0       6.613  -4.280   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       5.279  -5.050   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.279  -6.590   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.525  -7.496   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.049  -8.960   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.509  -8.960   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.604 -10.206   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.699 -11.452   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.794 -12.698   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.420 -14.105   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.515 -15.351   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.991 -16.815   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.745 -17.720   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -0.501 -16.815   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      -0.025 -15.351   0.000  0.00  0.00           O+0
HETATM   19  S   UNK     0       4.033  -7.496   0.000  0.00  0.00           S+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   19                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   19                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   18                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   14                                                       
CONECT   19    9    6                                                       
MASTER        0    0    0    0    0    0    0    0   19    0   40    0
END

View in JSmol

Synonyms

Value	Source
Acetate 5-[4-(2-furanyl)-3-buten-1-ynyl]-2-thienylmethyl ester	Generator

Chemical Formula

C₁₅H₁₂O₃S

Average Mass

272.3200 Da

Monoisotopic Mass

272.05072 Da

IUPAC Name

{5-[(3E)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate

Traditional Name

{5-[(3E)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate

CAS Registry Number

Not Available

SMILES

CC(=O)OCC1=CC=C(S1)C#C\C=C\C1=CC=CO1

InChI Identifier

InChI=1S/C15H12O3S/c1-12(16)18-11-15-9-8-14(19-15)7-3-2-5-13-6-4-10-17-13/h2,4-6,8-10H,11H2,1H3/b5-2+

InChI Key

AHFCUFWQGLAUPN-GORDUTHDSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Santolina chamaecyparissus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 2,5-disubstituted thiophenes. These are organic compounds containing a thiophene that is disubstituted at the C-2, and C5-positions.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Thiophenes

Sub Class

2,5-disubstituted thiophenes

Direct Parent

2,5-disubstituted thiophenes

Alternative Parents

Substituents

2,5-disubstituted thiophene
Heteroaromatic compound
Furan
Carboxylic acid ester
Oxacycle
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.48	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	39.44 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	72.18 m³·mol⁻¹	ChemAxon
Polarizability	29.68 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

14465015

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for {5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate (NP0214020)

MOL for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

3D MOL for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

3D SDF for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

3D-SDF for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

PDB for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

3D PDB for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

SMILES for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

INCHI for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

Structure for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)

3D Structure for NP0214020 ({5-[(3e)-4-(furan-2-yl)but-3-en-1-yn-1-yl]thiophen-2-yl}methyl acetate)