NP-MRD: Showing NP-Card for 7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione (NP0213304)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-05 12:15:20 UTC

Updated at

2022-09-05 12:15:20 UTC

NP-MRD ID

NP0213304

Secondary Accession Numbers

None

Natural Product Identification

Common Name

7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione

Description

Edgeworoside B belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. 7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione is found in Edgeworthia chrysantha. Based on a literature review very few articles have been published on Edgeworoside B.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052214152D          

 45 51  0  0  1  0            999 V2000
    5.0013   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -2.4750    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    9.2489   -2.8106    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6969   -2.1975    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1094   -1.4830    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.3557   -1.1474    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3643   -0.6984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8123   -0.0853    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9164   -1.6545    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.5295   -1.1025    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0039   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 21 20  1  6  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  6  0  0  0
 26 27  1  0  0  0  0
 24 28  1  0  0  0  0
 21 28  1  0  0  0  0
 28 29  1  1  0  0  0
 19 30  2  0  0  0  0
 30 31  1  0  0  0  0
 31 32  2  0  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
 34 35  1  0  0  0  0
 35 36  2  0  0  0  0
 35 37  1  0  0  0  0
 37 38  1  0  0  0  0
 18 38  2  0  0  0  0
 32 38  1  0  0  0  0
 17 39  2  0  0  0  0
 12 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 10 41  1  0  0  0  0
 41 42  2  0  0  0  0
  8 43  1  0  0  0  0
 43 44  2  0  0  0  0
  5 44  1  0  0  0  0
 44 45  1  0  0  0  0
  2 45  1  0  0  0  0
M  END

     RDKit          3D

 67 73  0  0  0  0  0  0  0  0999 V2000
    9.4077   -3.5607   -0.2118 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.1952   -3.3324   -0.0182 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5534   -4.1061    0.9260 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2161   -3.8415    1.1273 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6016   -2.8443    0.3955 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2698   -2.5411    0.5583 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6587   -1.5382   -0.1798 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3673   -0.8103   -1.1029 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7486    0.1694   -1.8147 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4464    0.6131   -1.6590 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5225    0.5059   -2.6934 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2174    0.9373   -2.5743 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7214    0.8442   -3.5800 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0200    1.3034   -3.3783 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3585    1.8617   -2.1376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6364    2.3378   -1.8741 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4266    1.9585   -1.1272 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7620    2.5327    0.1621 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2269    1.6833    1.1441 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3530    0.3687    0.8735 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7676   -0.7076    1.6282 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7533   -1.6450    1.7911 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0575   -2.7030    0.9423 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5423   -2.7997    0.8714 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.9842   -3.6967    1.8419 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9633   -3.2411   -0.5179 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4291   -4.4890   -0.8112 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9981   -1.3913    1.1485 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.9938   -1.4815    2.1268 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5537    2.1871    2.3804 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4148    3.5559    2.6400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9513    4.4158    1.6673 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8071    5.7606    1.8982 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3432    6.5665    0.8971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0316    5.9811   -0.3342 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6040    6.7085   -1.2651 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1818    4.6998   -0.5156 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6228    3.8820    0.4112 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1467    1.4974   -1.3491 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7255    1.5980   -0.3755 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9831    1.1821   -0.4911 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7926    1.3001    0.4753 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6994   -1.0997   -1.2792 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3143   -2.0997   -0.5452 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5836   -2.3940   -0.6956 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0873   -4.8875    1.4813 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6690   -4.4186    1.8549 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6905   -3.0937    1.2735 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5870   -1.3638    0.0080 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8437    0.0616   -3.6402 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4360    0.4121   -4.5227 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7802    1.2442   -4.1486 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3873    2.3180   -2.5305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9948   -0.3451    2.6676 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6120   -3.6137    1.3988 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6541   -2.4803   -0.0557 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2366   -4.0679    2.3767 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0761   -3.3216   -0.4966 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7012   -2.4721   -1.2563 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1146   -5.1868   -0.8228 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3978   -0.9802    0.1980 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5826   -0.7121    2.1634 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9291    1.5834    3.2121 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6774    3.9417    3.6235 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0523    6.1853    2.8484 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2006    7.6217    0.9883 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3033   -0.5524   -1.9970 H   0  0  0  0  0  0  0  0  0  0  0  0
 27 26  1  0
 26 24  1  0
 24 25  1  1
 24 23  1  0
 23 22  1  0
 22 21  1  0
 21 20  1  0
 20 19  1  0
 19 30  2  0
 30 31  1  0
 31 32  2  0
 32 33  1  0
 33 34  2  0
 34 35  1  0
 35 36  2  0
 35 37  1  0
 37 38  1  0
 38 18  2  0
 18 17  1  0
 17 39  2  0
 39 40  1  0
 40 41  1  0
 41 42  2  0
 41 10  1  0
 10  9  1  0
  9  8  1  0
  8  7  2  0
  7  6  1  0
  6  5  2  0
  5  4  1  0
  4  3  2  0
  3  2  1  0
  2  1  2  0
  2 45  1  0
 45 44  1  0
 44 43  2  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 21 28  1  0
 28 29  1  0
 28 24  1  0
 18 19  1  0
 15 17  1  0
 38 32  1  0
 12 39  1  0
 43  8  1  0
 44  5  1  0
 27 60  1  0
 26 58  1  0
 26 59  1  0
 25 57  1  0
 23 55  1  0
 23 56  1  0
 21 54  1  1
 30 63  1  0
 31 64  1  0
 33 65  1  0
 34 66  1  0
  7 49  1  0
  6 48  1  0
  4 47  1  0
  3 46  1  0
 43 67  1  0
 11 50  1  0
 13 51  1  0
 14 52  1  0
 16 53  1  0
 28 61  1  6
 29 62  1  0
M  END


  Mrv1652309052214152D          

 45 51  0  0  1  0            999 V2000
    5.0013   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -2.4750    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    9.2489   -2.8106    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6969   -2.1975    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1094   -1.4830    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.3557   -1.1474    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3643   -0.6984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8123   -0.0853    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9164   -1.6545    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.5295   -1.1025    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0039   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -5.3625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 21 20  1  6  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  6  0  0  0
 26 27  1  0  0  0  0
 24 28  1  0  0  0  0
 21 28  1  0  0  0  0
 28 29  1  1  0  0  0
 19 30  2  0  0  0  0
 30 31  1  0  0  0  0
 31 32  2  0  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
 34 35  1  0  0  0  0
 35 36  2  0  0  0  0
 35 37  1  0  0  0  0
 37 38  1  0  0  0  0
 18 38  2  0  0  0  0
 32 38  1  0  0  0  0
 17 39  2  0  0  0  0
 12 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 10 41  1  0  0  0  0
 41 42  2  0  0  0  0
  8 43  1  0  0  0  0
 43 44  2  0  0  0  0
  5 44  1  0  0  0  0
 44 45  1  0  0  0  0
  2 45  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0213304

> <DATABASE_NAME>
NP-MRD

> <SMILES>
OC[C@@]1(O)CO[C@@H](OC2=CC=C3C=CC(=O)OC3=C2C2=C3OC(=O)C(OC4=CC=C5C=CC(=O)OC5=C4)=CC3=CC=C2O)[C@@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C32H22O13/c33-13-32(39)14-40-31(29(32)37)43-20-8-3-16-5-10-24(36)44-27(16)26(20)25-19(34)7-2-17-11-22(30(38)45-28(17)25)41-18-6-1-15-4-9-23(35)42-21(15)12-18/h1-12,29,31,33-34,37,39H,13-14H2/t29-,31-,32+/m0/s1

> <INCHI_KEY>
RWKYICRZKBNXQX-RUHGTMQNSA-N

> <FORMULA>
C32H22O13

> <MOLECULAR_WEIGHT>
614.515

> <EXACT_MASS>
614.106040768

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_ATOM_COUNT>
67

> <JCHEM_AVERAGE_POLARIZABILITY>
58.31656552566344

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
7'-{[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxo-2H-chromen-7-yl)oxy]-2H,2'H-[8,8'-bichromene]-2,2'-dione

> <JCHEM_LOGP>
2.2269785816666667

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.858604360146488

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.084217165375527

> <JCHEM_PKA_STRONGEST_BASIC>
-3.142388162881967

> <JCHEM_POLAR_SURFACE_AREA>
187.51

> <JCHEM_REFRACTIVITY>
154.25639999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
7'-{[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  O   UNK     0       9.336 -10.010   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      10.669  -9.240   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      10.669  -7.700   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      12.003  -6.930   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      13.337  -7.700   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      14.670  -6.930   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      16.004  -7.700   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      16.004  -9.240   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      17.338 -10.010   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      18.672  -9.240   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      20.005 -10.010   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      21.339  -9.240   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      22.673 -10.010   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      24.006  -9.240   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      24.006  -7.700   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      25.340  -6.930   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      22.673  -6.930   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      22.673  -5.390   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      21.339  -4.620   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      20.005  -5.390   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      18.672  -4.620   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      17.265  -5.246   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      16.234  -4.102   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      17.004  -2.768   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      15.597  -2.142   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      17.480  -1.304   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      16.450  -0.159   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      18.511  -3.088   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      19.655  -2.058   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      21.339  -3.080   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      22.673  -2.310   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      24.006  -3.080   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      25.340  -2.310   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      26.674  -3.080   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      26.674  -4.620   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      28.007  -5.390   0.000  0.00  0.00           O+0
HETATM   37  O   UNK     0      25.340  -5.390   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      24.006  -4.620   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      21.339  -7.700   0.000  0.00  0.00           C+0
HETATM   40  O   UNK     0      20.005  -6.930   0.000  0.00  0.00           O+0
HETATM   41  C   UNK     0      18.672  -7.700   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0      17.338  -6.930   0.000  0.00  0.00           O+0
HETATM   43  C   UNK     0      14.670 -10.010   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      13.337  -9.240   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0      12.003 -10.010   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   45                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   44                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   43                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11   41                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13   39                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   39                                                  
CONECT   18   17   19   38                                                  
CONECT   19   18   20   30                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22   28                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25   26   28                                             
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26                                                            
CONECT   28   24   21   29                                                  
CONECT   29   28                                                            
CONECT   30   19   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33   38                                                  
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36   37                                                  
CONECT   36   35                                                            
CONECT   37   35   38                                                       
CONECT   38   37   18   32                                                  
CONECT   39   17   12   40                                                  
CONECT   40   39   41                                                       
CONECT   41   40   10   42                                                  
CONECT   42   41                                                            
CONECT   43    8   44                                                       
CONECT   44   43    5   45                                                  
CONECT   45   44    2                                                       
MASTER        0    0    0    0    0    0    0    0   45    0  102    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₂H₂₂O₁₃

Average Mass

614.5150 Da

Monoisotopic Mass

614.10604 Da

IUPAC Name

7'-{[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxo-2H-chromen-7-yl)oxy]-2H,2'H-[8,8'-bichromene]-2,2'-dione

Traditional Name

7'-{[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione

CAS Registry Number

Not Available

SMILES

OC[C@@]1(O)CO[C@@H](OC2=CC=C3C=CC(=O)OC3=C2C2=C3OC(=O)C(OC4=CC=C5C=CC(=O)OC5=C4)=CC3=CC=C2O)[C@@H]1O

InChI Identifier

InChI=1S/C32H22O13/c33-13-32(39)14-40-31(29(32)37)43-20-8-3-16-5-10-24(36)44-27(16)26(20)25-19(34)7-2-17-11-22(30(38)45-28(17)25)41-18-6-1-15-4-9-23(35)42-21(15)12-18/h1-12,29,31,33-34,37,39H,13-14H2/t29-,31-,32+/m0/s1

InChI Key

RWKYICRZKBNXQX-RUHGTMQNSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Edgeworthia chrysantha	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbohydrates and carbohydrate conjugates

Direct Parent

Phenolic glycosides

Alternative Parents

Substituents

Phenolic glycoside
7-hydroxycoumarin
Hydroxycoumarin
O-glycosyl compound
Diaryl ether
Coumarin
Pentose monosaccharide
Benzopyran
1-benzopyran
Pyranone
1-hydroxy-2-unsubstituted benzenoid
Pyran
Monosaccharide
Benzenoid
Tertiary alcohol
Oxolane
Heteroaromatic compound
Secondary alcohol
Lactone
Acetal
Oxacycle
Organoheterocyclic compound
Ether
Hydrocarbon derivative
Organic oxide
Alcohol
Primary alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.23	ChemAxon
pKa (Strongest Acidic)	7.08	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	187.51 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	154.26 m³·mol⁻¹	ChemAxon
Polarizability	58.32 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00019852

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101835681

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione (NP0213304)

MOL for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

3D MOL for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

3D SDF for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

3D-SDF for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

PDB for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

3D PDB for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

SMILES for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

INCHI for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

Structure for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)

3D Structure for NP0213304 (7'-{[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy}-7-hydroxy-3-[(2-oxochromen-7-yl)oxy]-[8,8'-bichromene]-2,2'-dione)