NP-MRD: Showing NP-Card for (1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid (NP0213287)

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Record Information

Version

2.0

Created at

2022-09-05 12:14:01 UTC

Updated at

2022-09-05 12:14:01 UTC

NP-MRD ID

NP0213287

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid

Description

Gibberellin A45, also known as GA45, belongs to the class of organic compounds known as c19-gibberellin 6-carboxylic acids. These are c19-gibberellins with a carboxyl group at the 6-position. (1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid is found in Anemia mexicana, Helianthus annuus and Pyrus communis. Gibberellin A45 is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652307222022482D          

 26 30  0  0  1  0            999 V2000
   -0.2125   -0.5590    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7333    0.9376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0240    1.5712    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7872    1.8842    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2074    0.7794    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5081    1.4822    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0913    0.0553    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6431    0.6682    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2676    0.1046    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4352    0.4371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4670   -0.0036    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0431   -1.3435    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8505   -1.5143    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5079   -1.9571    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9960    0.5211    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9960   -0.3038    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9960    1.3426    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7146    0.9319    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7146   -0.7260    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1558   -0.0720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4259    0.5211    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4259   -0.3038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7186   -1.5436    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5511    0.0230    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9960   -1.1253    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4041   -0.7079    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  4  6  1  0  0  0  0
  5  9  1  0  0  0  0
  6  8  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9  2  1  6  0  0  0
  6  2  1  6  0  0  0
  8 10  2  0  0  0  0
  1  9  1  0  0  0  0
  5 11  1  1  0  0  0
  1 12  1  1  0  0  0
 12 13  2  0  0  0  0
 12 14  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  6  0  0  0
 15 18  1  0  0  0  0
 16 19  1  0  0  0  0
 17 20  1  0  0  0  0
 18 21  1  0  0  0  0
 19 22  1  0  0  0  0
 19 23  1  0  0  0  0
 20 24  2  0  0  0  0
 19 20  1  6  0  0  0
 21 22  1  0  0  0  0
 16 25  1  1  0  0  0
 15  5  1  0  0  0  0
 16  1  1  0  0  0  0
  7 26  1  1  0  0  0
M  END

     RDKit          3D

 48 52  0  0  0  0  0  0  0  0999 V2000
    4.5422    0.8647   -0.4121 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3293    0.5814   -0.0072 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9851   -0.4727    1.0164 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7973   -1.7606    0.2701 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3758   -2.0425   -0.1087 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6121   -0.8253   -0.5499 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8135   -0.9853   -0.1810 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5989   -1.9279   -1.0370 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0102   -1.9655   -0.4304 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5621   -0.5565   -0.3729 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6348    0.2676    0.5143 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.2603    1.5240    0.9900 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1556   -0.6074    1.6437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7133   -0.6489    2.7597 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0419   -1.2912    1.1731 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3495    0.4405   -0.2585 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2856    1.2024    0.4573 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1452    2.5768   -0.0698 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1476    3.5775    0.7053 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0044    2.8528   -1.4174 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9971    0.4192    0.2009 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6261   -0.0167    1.5078 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0573    1.2189   -0.4547 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9659    1.2169   -1.8505 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6935    1.6354   -1.1488 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3873    0.3377   -0.0182 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7413   -0.5195    1.8098 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4792   -1.7668   -0.5958 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1263   -2.5868    0.9613 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8350   -2.5896    0.6957 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4006   -2.7450   -0.9830 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6911   -0.6169   -1.6169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1887   -2.9448   -0.8722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6624   -1.6501   -2.0872 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6646   -2.6551   -0.9731 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8553   -2.2824    0.6343 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5903   -0.5744   -0.0150 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4728   -0.1540   -1.4240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0521    1.8369    0.2602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5684    2.3713    1.1018 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7989    1.4034    1.9669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5111    0.7615   -1.3034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5115    1.2493    1.5438 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4388    3.6777   -1.8080 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7292    0.8265    2.2169 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1225   -0.8830    1.9554 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0355    2.2470   -0.0352 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5082    1.9794   -2.1753 H   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0
  5  4  1  0
  4  3  1  0
  3 22  1  0
 21 22  1  1
 21 23  1  0
 23 24  1  0
 23  2  1  0
  2  1  2  3
 21 17  1  0
 17 18  1  0
 18 20  1  0
 18 19  2  0
 17 16  1  0
 16 11  1  0
 11 12  1  1
 11 10  1  0
 10  9  1  0
  9  8  1  0
  8  7  1  0
  7 15  1  1
 15 13  1  0
 13 14  2  0
 21  6  1  0
  7 16  1  0
  7  6  1  0
  2  3  1  0
 13 11  1  0
  6 32  1  6
  5 30  1  0
  5 31  1  0
  4 28  1  0
  4 29  1  0
  3 27  1  1
 22 45  1  0
 22 46  1  0
 23 47  1  1
 24 48  1  0
  1 25  1  0
  1 26  1  0
 17 43  1  1
 20 44  1  0
 16 42  1  6
 12 39  1  0
 12 40  1  0
 12 41  1  0
 10 37  1  0
 10 38  1  0
  9 35  1  0
  9 36  1  0
  8 33  1  0
  8 34  1  0
M  END


  Mrv1652307222022482D          

 26 30  0  0  1  0            999 V2000
   -0.2125   -0.5590    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7333    0.9376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0240    1.5712    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7872    1.8842    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2074    0.7794    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5081    1.4822    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0913    0.0553    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6431    0.6682    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2676    0.1046    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4352    0.4371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4670   -0.0036    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0431   -1.3435    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8505   -1.5143    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5079   -1.9571    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9960    0.5211    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9960   -0.3038    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9960    1.3426    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7146    0.9319    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7146   -0.7260    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1558   -0.0720    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4259    0.5211    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4259   -0.3038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7186   -1.5436    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5511    0.0230    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9960   -1.1253    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4041   -0.7079    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  4  6  1  0  0  0  0
  5  9  1  0  0  0  0
  6  8  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9  2  1  6  0  0  0
  6  2  1  6  0  0  0
  8 10  2  0  0  0  0
  1  9  1  0  0  0  0
  5 11  1  1  0  0  0
  1 12  1  1  0  0  0
 12 13  2  0  0  0  0
 12 14  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  6  0  0  0
 15 18  1  0  0  0  0
 16 19  1  0  0  0  0
 17 20  1  0  0  0  0
 18 21  1  0  0  0  0
 19 22  1  0  0  0  0
 19 23  1  0  0  0  0
 20 24  2  0  0  0  0
 19 20  1  6  0  0  0
 21 22  1  0  0  0  0
 16 25  1  1  0  0  0
 15  5  1  0  0  0  0
 16  1  1  0  0  0  0
  7 26  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0213287

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H][C@@]12CC[C@@H]3C[C@]1([C@H](O)C3=C)[C@@H](C(O)=O)[C@]1([H])[C@@]3(C)CCC[C@@]21OC3=O

> <INCHI_IDENTIFIER>
InChI=1S/C19H24O5/c1-9-10-4-5-11-18(8-10,14(9)20)12(15(21)22)13-17(2)6-3-7-19(11,13)24-16(17)23/h10-14,20H,1,3-8H2,2H3,(H,21,22)/t10-,11-,12-,13-,14-,17-,18-,19-/m1/s1

> <INCHI_KEY>
MBNDVMTZEKAWKP-CFHXUCNZSA-N

> <FORMULA>
C19H24O5

> <MOLECULAR_WEIGHT>
332.396

> <EXACT_MASS>
332.162373873

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
48

> <JCHEM_AVERAGE_POLARIZABILITY>
34.480761371788475

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2R,5R,7R,8R,9S,10R,11R)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1^{5,8}.0^{1,10}.0^{2,8}]heptadecane-9-carboxylic acid

> <ALOGPS_LOGP>
1.53

> <JCHEM_LOGP>
1.7162272453333332

> <ALOGPS_LOGS>
-2.45

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
14.137005574339302

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.287036046146076

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1882429151269944

> <JCHEM_POLAR_SURFACE_AREA>
83.83

> <JCHEM_REFRACTIVITY>
83.92479999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.18e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,5R,7R,8R,9S,10R,11R)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1^{5,8}.0^{1,10}.0^{2,8}]heptadecane-9-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 22-JUL-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   22-JUL-20         0                                  
HETATM    1  C   UNK     0      -0.397  -1.044   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.369   1.750   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.045   2.933   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.469   3.517   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.387   1.455   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.815   2.767   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.037   0.103   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       3.067   1.247   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.499   0.195   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.546   0.816   0.000  0.00  0.00           C+0
HETATM   11  H   UNK     0      -0.872  -0.007   0.000  0.00  0.00           H+0
HETATM   12  C   UNK     0       0.080  -2.508   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       1.588  -2.827   0.000  0.00  0.00           O+0
HETATM   14  O   UNK     0      -0.948  -3.653   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      -1.859   0.973   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -1.859  -0.567   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      -1.859   2.506   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -3.201   1.740   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -3.201  -1.355   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -4.024  -0.134   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -4.528   0.973   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -4.528  -0.567   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.208  -2.881   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      -2.895   0.043   0.000  0.00  0.00           O+0
HETATM   25  H   UNK     0      -1.859  -2.101   0.000  0.00  0.00           H+0
HETATM   26  O   UNK     0       2.621  -1.321   0.000  0.00  0.00           O+0
CONECT    1    9   12   16                                                  
CONECT    2    9    6                                                       
CONECT    3    4    5                                                       
CONECT    4    3    6                                                       
CONECT    5    3    9   11   15                                             
CONECT    6    4    8    2                                                  
CONECT    7    8    9   26                                                  
CONECT    8    6    7   10                                                  
CONECT    9    5    7    2    1                                             
CONECT   10    8                                                            
CONECT   11    5                                                            
CONECT   12    1   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12                                                            
CONECT   15   16   17   18    5                                             
CONECT   16   15   19   25    1                                             
CONECT   17   15   20                                                       
CONECT   18   15   21                                                       
CONECT   19   16   22   23   20                                             
CONECT   20   17   24   19                                                  
CONECT   21   18   22                                                       
CONECT   22   19   21                                                       
CONECT   23   19                                                            
CONECT   24   20                                                            
CONECT   25   16                                                            
CONECT   26    7                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   60    0
END

View in JSmol

Synonyms

Value	Source
(1R,4AR,4BR,7R,9R,9ar,10S,10ar)-9-hydroxy-1-methyl-8-methylene-13-oxododecahydro-4a,1-(epoxymethano)-7,9a-methanobenzo[a]azulene-10-carboxylic acid	ChEBI
ent-10,15alpha-Dihydroxy-20-norgibberell-16-ene-7,19-dioic acid 19,10-lactone	ChEBI
GA45	ChEBI
(1R,4AR,4BR,7R,9R,9ar,10S,10ar)-9-hydroxy-1-methyl-8-methylene-13-oxododecahydro-4a,1-(epoxymethano)-7,9a-methanobenzo[a]azulene-10-carboxylate	Generator
ent-10,15a-Dihydroxy-20-norgibberell-16-ene-7,19-dioate 19,10-lactone	Generator
ent-10,15a-Dihydroxy-20-norgibberell-16-ene-7,19-dioic acid 19,10-lactone	Generator
ent-10,15alpha-Dihydroxy-20-norgibberell-16-ene-7,19-dioate 19,10-lactone	Generator
ent-10,15Α-dihydroxy-20-norgibberell-16-ene-7,19-dioate 19,10-lactone	Generator
ent-10,15Α-dihydroxy-20-norgibberell-16-ene-7,19-dioic acid 19,10-lactone	Generator
Gibberellin A45	HMDB

Chemical Formula

C₁₉H₂₄O₅

Average Mass

332.3960 Da

Monoisotopic Mass

332.16237 Da

IUPAC Name

(1R,2R,5R,7R,8R,9S,10R,11R)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1^{5,8}.0^{1,10}.0^{2,8}]heptadecane-9-carboxylic acid

Traditional Name

(1R,2R,5R,7R,8R,9S,10R,11R)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1^{5,8}.0^{1,10}.0^{2,8}]heptadecane-9-carboxylic acid

CAS Registry Number

Not Available

SMILES

[H][C@@]12CC[C@@H]3C[C@]1([C@H](O)C3=C)[C@@H](C(O)=O)[C@]1([H])[C@@]3(C)CCC[C@@]21OC3=O

InChI Identifier

InChI=1S/C19H24O5/c1-9-10-4-5-11-18(8-10,14(9)20)12(15(21)22)13-17(2)6-3-7-19(11,13)24-16(17)23/h10-14,20H,1,3-8H2,2H3,(H,21,22)/t10-,11-,12-,13-,14-,17-,18-,19-/m1/s1

InChI Key

MBNDVMTZEKAWKP-CFHXUCNZSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Anemia mexicana	LOTUS Database	35616633
Helianthus annuus	LOTUS Database	35616633
Pyrus communis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as c19-gibberellin 6-carboxylic acids. These are c19-gibberellins with a carboxyl group at the 6-position.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

C19-gibberellin 6-carboxylic acids

Alternative Parents

Substituents

20-norgibberellane-6-carboxylic acid
Diterpene lactone
Caprolactone
Oxepane
Dicarboxylic acid or derivatives
Gamma butyrolactone
Cyclic alcohol
Tetrahydrofuran
Carboxylic acid ester
Lactone
Secondary alcohol
Organoheterocyclic compound
Oxacycle
Carboxylic acid
Carboxylic acid derivative
Hydrocarbon derivative
Organic oxide
Alcohol
Carbonyl group
Organooxygen compound
Organic oxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.53	ALOGPS
logP	1.72	ChemAxon
logS	-2.4	ALOGPS
pKa (Strongest Acidic)	4.29	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	83.83 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	83.92 m³·mol⁻¹	ChemAxon
Polarizability	34.48 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0035042

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB013656

KNApSAcK ID

C00000045

Chemspider ID

76963345

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101603116

PDB ID

Not Available

ChEBI ID

142003

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid (NP0213287)

MOL for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

3D MOL for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

3D SDF for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

3D-SDF for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

PDB for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

3D PDB for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

SMILES for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

INCHI for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

Structure for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)

3D Structure for NP0213287 ((1r,2r,5r,7r,8r,9s,10r,11r)-7-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1⁵,⁸.0¹,¹⁰.0²,⁸]heptadecane-9-carboxylic acid)