NP-MRD: Showing NP-Card for 6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate (NP0212220)

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Record Information

Version

2.0

Created at

2022-09-05 10:49:47 UTC

Updated at

2022-09-05 10:49:47 UTC

NP-MRD ID

NP0212220

Secondary Accession Numbers

None

Natural Product Identification

Common Name

6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate

Description

6,6''-Bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-[1λ⁴]thiolane-4',3''-quinolizine]-1'-one belongs to the class of organic compounds known as quinolizines. Quinolizines are compounds containing a quinolizine moiety, which consists of two fused pyridine rings sharing a nitrogen atom. 6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate is found in Nuphar lutea. 6,6''-Bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-[1λ⁴]thiolane-4',3''-quinolizine]-1'-one is a very strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004201501162D          

 37 43  0  0  0  0            999 V2000
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    5.3218    0.3620    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
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    4.1303   -0.4268    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6872   -1.1227    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.1895    2.6191    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
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  4  5  1  0  0  0  0
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 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
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 26 27  1  0  0  0  0
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  6 31  1  0  0  0  0
 31 32  1  0  0  0  0
  5 33  1  0  0  0  0
 33 34  2  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  2  0  0  0  0
 33 37  1  0  0  0  0
M  END

     RDKit          3D

 79 85  0  0  0  0  0  0  0  0999 V2000
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 36 78  1  1
 37 79  1  0
 10 49  1  0
  8 48  1  0
  7 47  1  0
M  END


  Mrv1533004201501162D          

 37 43  0  0  0  0            999 V2000
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    1.4741    2.5164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6055    0.2097    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4983    0.3115    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0429    0.9994    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2344    1.7883    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4101    1.8241    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1895    2.6191    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8774    3.0746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5232    2.5611    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  2  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 14 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 17 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 25 29  1  0  0  0  0
 14 30  1  0  0  0  0
 10 30  1  0  0  0  0
 10 31  1  0  0  0  0
  6 31  1  0  0  0  0
 31 32  1  0  0  0  0
  5 33  1  0  0  0  0
 33 34  2  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  2  0  0  0  0
 33 37  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0212220

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1CCC(N2C1CCC1(CS(=O)C3(C1)CCN1C(C3)C(C)CCC1C1=COC=C1)C2O)C1=COC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C30H42N2O4S/c1-20-4-6-26(23-9-14-36-17-23)32-24(20)7-10-29(28(32)33)18-30(37(34)19-29)11-12-31-25(22-8-13-35-16-22)5-3-21(2)27(31)15-30/h8-9,13-14,16-17,20-21,24-28,33H,3-7,10-12,15,18-19H2,1-2H3

> <INCHI_KEY>
WSURZQCNTWPWGO-UHFFFAOYSA-N

> <FORMULA>
C30H42N2O4S

> <MOLECULAR_WEIGHT>
526.74

> <EXACT_MASS>
526.286529014

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
79

> <JCHEM_AVERAGE_POLARIZABILITY>
58.781835070786975

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-[1λ⁴]thiolane-4',3''-quinolizine]-1'-one

> <ALOGPS_LOGP>
3.64

> <JCHEM_LOGP>
3.7342078963333334

> <ALOGPS_LOGS>
-3.64

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.108235256390024

> <JCHEM_PKA_STRONGEST_BASIC>
7.897068657321647

> <JCHEM_POLAR_SURFACE_AREA>
70.06

> <JCHEM_REFRACTIVITY>
145.92639999999994

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.21e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-[1λ⁴]thiolane-4',3''-quinolizine]-1'-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 20-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-APR-15         0                                  
HETATM    1  C   UNK     0      13.171  -1.798   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      12.321  -0.514   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      13.008   0.864   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      12.158   2.148   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      10.621   2.054   0.000  0.00  0.00           C+0
HETATM    6  N   UNK     0       9.934   0.676   0.000  0.00  0.00           N+0
HETATM    7  C   UNK     0      10.784  -0.608   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.097  -1.987   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.560  -2.081   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.710  -0.797   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.883  -2.096   0.000  0.00  0.00           C+0
HETATM   12  S   UNK     0       5.392  -1.710   0.000  0.00  0.00           S+0
HETATM   13  O   UNK     0       4.204  -2.690   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       5.297  -0.173   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.364   1.365   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.065   2.193   0.000  0.00  0.00           C+0
HETATM   17  N   UNK     0       2.700   1.481   0.000  0.00  0.00           N+0
HETATM   18  C   UNK     0       2.633  -0.057   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.932  -0.885   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.267  -0.769   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.200  -2.307   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -0.032   0.059   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       0.035   1.597   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.401   2.309   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.468   3.847   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.262   4.806   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       0.801   6.248   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       2.340   6.181   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       2.752   4.697   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       6.730   0.391   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       8.397   0.582   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0       7.547   1.866   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0       9.771   3.338   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       8.232   3.405   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0       7.820   4.889   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0       9.105   5.739   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      10.310   4.781   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    7                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   33                                                  
CONECT    6    5    7   31                                                  
CONECT    7    6    2    8                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   30   31                                             
CONECT   11   10   12                                                       
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   19   30                                             
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   24                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18   14                                                       
CONECT   20   18   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   17   25                                                  
CONECT   25   24   26   29                                                  
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   25                                                       
CONECT   30   14   10                                                       
CONECT   31   10    6   32                                                  
CONECT   32   31                                                            
CONECT   33    5   34   37                                                  
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   33                                                       
MASTER        0    0    0    0    0    0    0    0   37    0   86    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₄₂N₂O₄S

Average Mass

526.7400 Da

Monoisotopic Mass

526.28653 Da

IUPAC Name

6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-[1λ⁴]thiolane-4',3''-quinolizine]-1'-one

Traditional Name

6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-[1λ⁴]thiolane-4',3''-quinolizine]-1'-one

CAS Registry Number

Not Available

SMILES

CC1CCC(N2C1CCC1(CS(=O)C3(C1)CCN1C(C3)C(C)CCC1C1=COC=C1)C2O)C1=COC=C1

InChI Identifier

InChI=1S/C30H42N2O4S/c1-20-4-6-26(23-9-14-36-17-23)32-24(20)7-10-29(28(32)33)18-30(37(34)19-29)11-12-31-25(22-8-13-35-16-22)5-3-21(2)27(31)15-30/h8-9,13-14,16-17,20-21,24-28,33H,3-7,10-12,15,18-19H2,1-2H3

InChI Key

WSURZQCNTWPWGO-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Nuphar lutea	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as quinolizines. Quinolizines are compounds containing a quinolizine moiety, which consists of two fused pyridine rings sharing a nitrogen atom.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Quinolizines

Sub Class

Not Available

Direct Parent

Quinolizines

Alternative Parents

Substituents

Azaspirodecane
Quinolizidine
Quinolizine
Aralkylamine
Piperidine
Furan
Heteroaromatic compound
Thiolane
Hemiaminal
Sulfoxide
Tertiary amine
Tertiary aliphatic amine
Alkanolamine
Oxacycle
Azacycle
Sulfinyl compound
Organic oxide
Organooxygen compound
Organonitrogen compound
Organopnictogen compound
Organic oxygen compound
Hydrocarbon derivative
Amine
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.64	ALOGPS
logP	3.73	ChemAxon
logS	-3.6	ALOGPS
pKa (Strongest Acidic)	13.11	ChemAxon
pKa (Strongest Basic)	7.9	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	70.06 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	145.93 m³·mol⁻¹	ChemAxon
Polarizability	58.78 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate (NP0212220)

MOL for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

3D MOL for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

3D SDF for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

3D-SDF for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

PDB for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

3D PDB for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

SMILES for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

INCHI for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

Structure for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)

3D Structure for NP0212220 (6,6''-bis(furan-3-yl)-4''-hydroxy-9,9''-dimethyl-hexadecahydrodispiro[quinolizine-2,2'-thiolane-4',3''-quinolizin]-1'-ium-1'-olate)