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Record Information
Version2.0
Created at2022-09-05 09:05:43 UTC
Updated at2022-09-05 09:05:43 UTC
NP-MRD IDNP0211012
Secondary Accession NumbersNone
Natural Product Identification
Common Namemethyl 3-[(2s,3s,4s,5r)-3,4-dihydroxy-5-phenyloxolan-2-yl]propanoate
Description(+)-Goniothalesdiol belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. methyl 3-[(2s,3s,4s,5r)-3,4-dihydroxy-5-phenyloxolan-2-yl]propanoate is found in Goniothalamus borneensis. methyl 3-[(2s,3s,4s,5r)-3,4-dihydroxy-5-phenyloxolan-2-yl]propanoate was first documented in 2004 (PMID: 15058944). Based on a literature review a significant number of articles have been published on (+)-Goniothalesdiol (PMID: 16819228) (PMID: 25865074) (PMID: 21243696) (PMID: 20297827) (PMID: 16626158) (PMID: 16288545).
Structure
Thumb
Synonyms
ValueSource
GoniothalesdiolMeSH
Chemical FormulaC14H18O5
Average Mass266.2930 Da
Monoisotopic Mass266.11542 Da
IUPAC Namemethyl 3-[(2S,3S,4S,5R)-3,4-dihydroxy-5-phenyloxolan-2-yl]propanoate
Traditional Namemethyl 3-[(2S,3S,4S,5R)-3,4-dihydroxy-5-phenyloxolan-2-yl]propanoate
CAS Registry NumberNot Available
SMILES
COC(=O)CC[C@@H]1O[C@@H]([C@@H](O)[C@@H]1O)C1=CC=CC=C1
InChI Identifier
InChI=1S/C14H18O5/c1-18-11(15)8-7-10-12(16)13(17)14(19-10)9-5-3-2-4-6-9/h2-6,10,12-14,16-17H,7-8H2,1H3/t10-,12+,13-,14+/m0/s1
InChI KeyRUDVTXZKYPJLFH-AHLTXXRQSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Goniothalamus borneensisLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentPhenolic glycosides
Alternative Parents
Substituents
  • Phenolic glycoside
  • C-glycosyl compound
  • Pentose monosaccharide
  • Fatty acid ester
  • Monocyclic benzene moiety
  • Fatty acyl
  • Benzenoid
  • Monosaccharide
  • Methyl ester
  • Oxolane
  • 1,2-diol
  • Carboxylic acid ester
  • Secondary alcohol
  • Oxacycle
  • Carboxylic acid derivative
  • Organoheterocyclic compound
  • Dialkyl ether
  • Ether
  • Monocarboxylic acid or derivatives
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.69ChemAxon
pKa (Strongest Acidic)12.78ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area75.99 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity67.23 m³·mol⁻¹ChemAxon
Polarizability27.68 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8236988
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10061436
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Lan YH, Chang FR, Yang YL, Wu YC: New constituents from stems of Goniothalamus amuyon. Chem Pharm Bull (Tokyo). 2006 Jul;54(7):1040-3. doi: 10.1248/cpb.54.1040. [PubMed:16819228 ]
  2. Suchaichit N, Kanokmedhakul K, Panthama N, Poopasit K, Moosophon P, Kanokmedhakul S: A 2H-tetrahydropyran derivative and bioactive constituents from the bark of Goniothalamus elegants Ast. Fitoterapia. 2015 Jun;103:206-12. doi: 10.1016/j.fitote.2015.04.005. Epub 2015 Apr 10. [PubMed:25865074 ]
  3. Hernandez-Torres G, Carreno MC, Urbano A, Colobert F: The effect of sulfoxides on the stereoselective construction of tetrahydrofurans: total synthesis of (+)-goniothalesdiol. Chemistry. 2011 Jan 24;17(4):1283-93. doi: 10.1002/chem.201002637. Epub 2010 Dec 10. [PubMed:21243696 ]
  4. Kang B, Chang S, Decker S, Britton R: Regioselective and stereoselective cyclizations of chloropolyols in water: rapid synthesis of hydroxytetrahydrofurans. Org Lett. 2010 Apr 16;12(8):1716-9. doi: 10.1021/ol100260z. [PubMed:20297827 ]
  5. Prasad KR, Gholap SL: Stereoselective synthesis of (+)-goniothalesdiol. J Org Chem. 2006 Apr 28;71(9):3643-5. doi: 10.1021/jo060159f. [PubMed:16626158 ]
  6. Carreno MC, Hernandez-Torres G, Urbano A, Colobert F: Total stereoselective synthesis of (+)-goniothalesdiol. Org Lett. 2005 Nov 24;7(24):5517-20. doi: 10.1021/ol0523603. [PubMed:16288545 ]
  7. Murga J, Ruiz P, Falomir E, Carda M, Peris G, Marco JA: Stereoselective anti aldol reactions of erythrulose derivatives. Functionalized chiral d3 and d4 synthons. J Org Chem. 2004 Mar 19;69(6):1987-92. doi: 10.1021/jo0356356. [PubMed:15058944 ]
  8. LOTUS database [Link]