NP-MRD: Showing NP-Card for (1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid (NP0210888)

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Record Information

Version

2.0

Created at

2022-09-05 08:54:31 UTC

Updated at

2022-09-05 08:54:31 UTC

NP-MRD ID

NP0210888

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid

Description

Pseudolaric acid C2, also known as pseudolarate C2, belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety. (1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid is found in Larix kaempferi. (1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid was first documented in 2007 (PMID: 17446030). Based on a literature review a small amount of articles have been published on pseudolaric acid C2 (PMID: 25322560) (PMID: 22260030) (PMID: 19918938).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052210542D          

 30 32  0  0  1  0            999 V2000
   -1.0339   -0.0803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2438   -0.3176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0542   -1.1205    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4280    0.3151    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3700   -0.1750    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8655   -0.8346    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6901   -0.8586    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2230   -0.2287    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1110   -0.4044    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9153   -0.1097    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6529   -1.1040    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2957    0.5952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3302    0.9599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5768    0.6237    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7971    0.6064    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4027   -0.1182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7234   -0.8784    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5176   -1.1016    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2378   -1.7033    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9238   -1.8770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9923   -2.7691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3115   -3.2351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4325   -2.8785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4956   -2.0559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1133   -3.3444    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0501   -4.1670    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8572   -2.9878    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1873   -0.6198    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2282    0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8537    0.9746    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
  8 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
  5 14  1  0  0  0  0
 14 15  1  6  0  0  0
 15 16  1  0  0  0  0
 17 16  1  6  0  0  0
  5 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 18 20  1  6  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 18 28  1  0  0  0  0
 28 29  1  0  0  0  0
 14 29  1  0  0  0  0
 29 30  2  0  0  0  0
M  END

     RDKit          3D

 56 58  0  0  0  0  0  0  0  0999 V2000
   -2.2369   -2.5401    3.2045 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7143   -1.3517    2.4935 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1341   -0.4550    3.1528 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8626   -1.2341    1.1369 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3941   -0.1423    0.4033 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0102    1.1227    0.8608 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4789    0.8824    1.1546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1833    0.9724   -0.1419 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1967    1.9930   -0.2209 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8176    2.0954   -1.3175 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4649    2.8081    0.8503 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9491    0.2044   -1.1899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0014   -0.8898   -1.3957 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6032   -0.4551   -1.0566 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.6246   -1.6095   -1.2598 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4105   -1.4999   -0.1610 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1263   -0.1359    0.4838 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7536    0.9224   -0.3798 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2259    2.0308    0.5422 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8679    0.3850   -1.2035 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1180    0.3258   -0.7799 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1897   -0.2191   -1.6417 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4295   -0.2653   -1.1903 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6747    0.2444    0.1854 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5343   -0.7991   -2.0096 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7025   -0.8504   -1.6037 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2221   -1.2510   -3.2726 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1667    1.5131   -1.2798 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1229    0.6811   -1.8468 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5759    0.8926   -3.0218 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9667   -2.2769    4.0044 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7831   -3.2121    2.5090 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3709   -3.0491    3.6863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5441    1.4230    1.8244 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9272    1.9770    0.1804 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6296   -0.1309    1.5427 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8693    1.6130    1.8930 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7621    3.4643    1.1689 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5769    0.4391   -2.0360 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9936   -1.2122   -2.4524 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2354   -1.7934   -0.7976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1820   -1.6140   -2.2625 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1585   -2.5939   -1.1224 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4457   -1.5575   -0.5430 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2227   -2.2475    0.6449 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4796   -0.0945    1.5120 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6451    1.6299    1.4858 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0014    2.5985    0.0001 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3800    2.7094    0.7297 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6786    0.0145   -2.2087 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3331    0.6831    0.2042 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9592   -0.5719   -2.6219 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3535    1.2965    0.3138 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7679    0.2287    0.3634 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1539   -0.4418    0.8918 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8611   -0.6566   -4.0047 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  5  4  1  1
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8 12  2  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 28  1  0
 28 29  1  0
 29 30  2  0
 18 20  1  6
 20 21  2  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 23 25  1  0
 25 27  1  0
 25 26  2  0
  8  9  1  0
  9 11  1  0
  9 10  2  0
 14  5  1  0
 14 29  1  6
 17  5  1  0
  1 31  1  0
  1 32  1  0
  1 33  1  0
  6 34  1  0
  6 35  1  0
  7 36  1  0
  7 37  1  0
 12 39  1  0
 13 40  1  0
 13 41  1  0
 15 42  1  0
 15 43  1  0
 16 44  1  0
 16 45  1  0
 17 46  1  1
 19 47  1  0
 19 48  1  0
 19 49  1  0
 20 50  1  0
 21 51  1  0
 22 52  1  0
 24 53  1  0
 24 54  1  0
 24 55  1  0
 27 56  1  0
 11 38  1  0
M  END


  Mrv1652309052210542D          

 30 32  0  0  1  0            999 V2000
   -1.0339   -0.0803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2438   -0.3176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0542   -1.1205    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4280    0.3151    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3700   -0.1750    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8655   -0.8346    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6901   -0.8586    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2230   -0.2287    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1110   -0.4044    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9153   -0.1097    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6529   -1.1040    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2957    0.5952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3302    0.9599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5768    0.6237    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7971    0.6064    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4027   -0.1182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7234   -0.8784    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5176   -1.1016    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2378   -1.7033    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9238   -1.8770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9923   -2.7691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3115   -3.2351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4325   -2.8785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4956   -2.0559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1133   -3.3444    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0501   -4.1670    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8572   -2.9878    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1873   -0.6198    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2282    0.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8537    0.9746    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
  8 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
  5 14  1  0  0  0  0
 14 15  1  6  0  0  0
 15 16  1  0  0  0  0
 17 16  1  6  0  0  0
  5 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 18 20  1  6  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 18 28  1  0  0  0  0
 28 29  1  0  0  0  0
 14 29  1  0  0  0  0
 29 30  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0210888

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)O[C@]12CCC(=CC[C@]11CC[C@H]2[C@](C)(OC1=O)\C=C\C=C(/C)C(O)=O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C22H26O8/c1-13(17(24)25)5-4-9-20(3)16-8-11-21(19(28)30-20)10-6-15(18(26)27)7-12-22(16,21)29-14(2)23/h4-6,9,16H,7-8,10-12H2,1-3H3,(H,24,25)(H,26,27)/b9-4+,13-5+/t16-,20+,21+,22-/m0/s1

> <INCHI_KEY>
ZPSQWDVEMDWXPJ-HPHAYBORSA-N

> <FORMULA>
C22H26O8

> <MOLECULAR_WEIGHT>
418.442

> <EXACT_MASS>
418.162767797

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
42.65124054678492

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,7S,8S,9R)-7-(acetyloxy)-9-[(1E,3E)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0^{1,7}]tridec-3-ene-4-carboxylic acid

> <JCHEM_LOGP>
2.568379349999999

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
4.553994268605733

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.947976179534507

> <JCHEM_PKA_STRONGEST_BASIC>
-6.78650775044314

> <JCHEM_POLAR_SURFACE_AREA>
127.20000000000002

> <JCHEM_REFRACTIVITY>
106.36239999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1R,7S,8S,9R)-7-(acetyloxy)-9-[(1E,3E)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0^{1,7}]tridec-3-ene-4-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0      -1.930  -0.150   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.455  -0.593   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0      -0.101  -2.092   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0       0.799   0.588   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       2.557  -0.327   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.482  -1.558   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.022  -1.603   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.016  -0.427   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       7.674  -0.755   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       9.175  -0.205   0.000  0.00  0.00           O+0
HETATM   11  O   UNK     0       8.685  -2.061   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       6.152   1.111   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.350   1.792   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.943   1.164   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.488   1.132   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.752  -0.221   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.350  -1.640   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.833  -2.056   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       4.177  -3.179   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.724  -3.504   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.852  -5.169   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.581  -6.039   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -0.807  -5.373   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -0.925  -3.838   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -2.078  -6.243   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -1.960  -7.778   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      -3.467  -5.577   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       4.083  -1.157   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       4.159   0.381   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       5.327   1.819   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   14   17                                             
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   12                                                  
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9                                                            
CONECT   12    8   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13    5   15   29                                             
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16    5   18                                                  
CONECT   18   17   19   20   28                                             
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25                                                            
CONECT   28   18   29                                                       
CONECT   29   28   14   30                                                  
CONECT   30   29                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   64    0
END

View in JSmol

Synonyms

Value	Source
Pseudolarate C2	Generator

Chemical Formula

C₂₂H₂₆O₈

Average Mass

418.4420 Da

Monoisotopic Mass

418.16277 Da

IUPAC Name

(1R,7S,8S,9R)-7-(acetyloxy)-9-[(1E,3E)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0^{1,7}]tridec-3-ene-4-carboxylic acid

Traditional Name

(1R,7S,8S,9R)-7-(acetyloxy)-9-[(1E,3E)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0^{1,7}]tridec-3-ene-4-carboxylic acid

CAS Registry Number

Not Available

SMILES

CC(=O)O[C@]12CCC(=CC[C@]11CC[C@H]2[C@](C)(OC1=O)\C=C\C=C(/C)C(O)=O)C(O)=O

InChI Identifier

InChI=1S/C22H26O8/c1-13(17(24)25)5-4-9-20(3)16-8-11-21(19(28)30-20)10-6-15(18(26)27)7-12-22(16,21)29-14(2)23/h4-6,9,16H,7-8,10-12H2,1-3H3,(H,24,25)(H,26,27)/b9-4+,13-5+/t16-,20+,21+,22-/m0/s1

InChI Key

ZPSQWDVEMDWXPJ-HPHAYBORSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Larix kaempferi	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Diterpene lactones

Alternative Parents

Substituents

Diterpene lactone
Diterpenoid
Prenyldaucane diterpenoid
Tetracarboxylic acid or derivatives
Caprolactone
Delta valerolactone
Delta_valerolactone
Oxepane
Oxane
Carboxylic acid ester
Lactone
Organoheterocyclic compound
Oxacycle
Carboxylic acid
Carboxylic acid derivative
Hydrocarbon derivative
Organic oxide
Carbonyl group
Organic oxygen compound
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.57	ChemAxon
pKa (Strongest Acidic)	3.95	ChemAxon
pKa (Strongest Basic)	-6.8	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	127.2 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	106.36 m³·mol⁻¹	ChemAxon
Polarizability	42.65 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

4977576

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

6475945

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Liu P, Guo HZ, Sun JH, Xu M, Guo H, Sun SF, Guo DA: [Metabolic pathway and metabolites of total diterpene acid isolated from Pseudolarix kaempferi]. Yao Xue Xue Bao. 2014 Aug;49(8):1169-74. [PubMed:25322560 ]
Liu P, Xu M, Guo HZ, Sun JH, Guo H, Sun SF, Guo DA: [Metabolic pathway and metabolites of pseudolaric acid B]. Yao Xue Xue Bao. 2011 Nov;46(11):1361-5. [PubMed:22260030 ]
Ye X, Tang M, Chen L, Peng A, Ma L, Ye H: Rapid separation and identification of major constituents in Pseudolarix kaempferi by ultra-performance liquid chromatography coupled with electrospray and quadrupole time-of-flight tandem mass spectrometry. Rapid Commun Mass Spectrom. 2009 Dec;23(24):3954-62. doi: 10.1002/rcm.4336. [PubMed:19918938 ]
Liu P, Guo H, Guo H, Sheng Y, Wang W, Xu M, Feng S, Cheng F, Guo DA: Simultaneous determination of seven major diterpenoids in Pseudolarix kaempferi by high-performance liquid chromatography DAD method. J Pharm Biomed Anal. 2007 Jul 27;44(3):730-6. doi: 10.1016/j.jpba.2007.03.005. Epub 2007 Mar 14. [PubMed:17446030 ]
LOTUS database [Link]

Showing NP-Card for (1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid (NP0210888)

MOL for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

3D MOL for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

3D SDF for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

3D-SDF for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

PDB for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

3D PDB for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

SMILES for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

INCHI for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

Structure for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)

3D Structure for NP0210888 ((1r,7s,8s,9r)-7-(acetyloxy)-9-[(1e,3e)-4-carboxy-4-methylbuta-1,3-dien-1-yl]-9-methyl-11-oxo-10-oxatricyclo[6.3.2.0¹,⁷]tridec-3-ene-4-carboxylic acid)