NP-MRD: Showing NP-Card for (3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid (NP0210520)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-05 08:22:14 UTC

Updated at

2022-09-05 08:22:15 UTC

NP-MRD ID

NP0210520

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid

Description

(3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid is found in Calophyllum brasiliense.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052210222D          

 41 44  0  0  1  0            999 V2000
   -2.7210   -3.1087    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9086   -3.2520    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6264   -4.0272    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3783   -2.6200    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5564   -2.5481    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6283   -1.7262    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0980   -1.0942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4323   -2.0127    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9626   -2.6447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6804   -3.4200    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1320   -3.5632    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2107   -4.0520    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4502   -1.7981    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2661   -1.6762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7119   -1.0158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  4  2  1  1  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  6  0  0  0
  8  7  1  6  0  0  0
  8  9  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
  8 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  6  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 17 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 22 27  1  0  0  0  0
 16 28  2  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  1  0  0  0
 30 32  1  0  0  0  0
 32 33  1  6  0  0  0
 32 34  1  0  0  0  0
 34 35  2  0  0  0  0
 34 36  1  0  0  0  0
 28 36  1  0  0  0  0
 36 37  2  0  0  0  0
  8 37  1  0  0  0  0
 37 38  1  0  0  0  0
  6 39  1  0  0  0  0
  4 39  1  0  0  0  0
 39 40  1  0  0  0  0
 39 41  1  0  0  0  0
M  END

     RDKit          3D

 85 88  0  0  0  0  0  0  0  0999 V2000
   -5.1234    0.3174   -3.0080 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4526    1.1349   -2.0344 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4021    2.2606   -2.4366 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0651    1.1507   -0.6392 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.8242    2.0704   -0.4993 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9598    0.7558   -0.6379 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6945    1.0394    0.0428 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6125    0.0374    0.0777 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0404   -1.1576    0.9534 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1859   -0.7233    2.3668 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5338   -1.3587    3.3216 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6805   -0.9215    4.7348 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3345   -2.5071    2.9870 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6423    0.4928    0.7354 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5792    0.8679    1.9503 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9532    0.5507    0.1114 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1103    1.1578    0.8492 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3988    1.1380    0.1032 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4449    1.7837    0.9810 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4724    3.0292    1.0736 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3686    1.0337    1.6818 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3205    0.3505    2.0932 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1412    0.8510    3.3518 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3531    0.0718    4.4678 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7513   -1.2285    4.2859 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9457   -1.7803    3.0461 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7239   -0.9681    1.9313 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0759    0.0318   -1.0945 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2814    0.0018   -1.7750 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3769    0.0788   -3.1784 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.7140   -0.4130   -3.6841 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2524   -0.5517   -3.9063 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6747    0.3685   -4.9901 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1646   -1.1004   -3.1090 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4074   -2.0469   -3.5073 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9100   -0.5425   -1.7634 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3054   -0.5486   -1.2482 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3366   -1.1290   -1.9812 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1366    0.0749   -0.0829 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5382   -1.2853   -0.5314 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3219    0.1355    1.4458 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4617   -0.5444   -2.9379 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5561    0.5107   -4.0148 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4166    1.8036   -2.3503 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3243    3.1207   -1.7753 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2619    2.5074   -3.5107 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8996    1.4480    0.0263 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8064    2.4932    0.4947 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6757    2.7731   -1.3043 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8157    0.6589   -1.7475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2483    1.9518   -0.4846 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8956    1.4795    1.0775 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2686   -1.9603    0.8794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9653   -1.5578    0.5287 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8127    0.1234    2.5947 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7217   -0.6090    4.8907 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0301   -0.1318    4.9772 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4702   -1.7791    5.4195 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7248   -2.9732    3.9205 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1306   -2.1642    2.3186 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3039   -3.2538    2.4409 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8623    2.1908    1.1785 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4155    1.7392   -0.8293 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7843    0.1249   -0.0806 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7789    0.1876    1.3439 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8265    1.8817    3.4533 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2130    0.4620    5.4874 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9182   -1.8428    5.1746 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2563   -2.7971    2.9248 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8732   -1.3906    0.9512 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3541    1.1826   -3.4210 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5256   -0.2830   -2.9614 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6658   -1.4990   -3.9360 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0174    0.1159   -4.6255 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6727   -1.4189   -4.5010 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5210    0.9166   -5.4432 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9536    1.0355   -4.5093 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2122   -0.2589   -5.8051 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5247   -2.1258   -1.9387 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5665   -1.2236   -0.9879 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7392   -1.9674    0.3598 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8115   -1.8454   -1.1231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9077    1.0332    1.8925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4415    0.1888    1.5890 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0245   -0.8256    1.8789 H   0  0  0  0  0  0  0  0  0  0  0  0
 31 30  1  0
 30 29  1  0
 29 28  1  0
 28 16  2  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 21  1  0
 19 20  2  0
 17 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 26 27  2  0
 16 14  1  0
 14 15  2  0
 14  8  1  0
  8  9  1  1
  9 10  1  0
 10 11  2  3
 11 12  1  0
 11 13  1  0
  8  7  1  0
  7  6  1  0
  6  5  1  0
  5  4  1  0
  4  2  1  0
  2  3  1  0
  2  1  2  3
  4 39  1  0
 39 40  1  0
 39 41  1  0
  8 37  1  0
 37 38  1  0
 37 36  2  0
 36 34  1  0
 34 35  2  0
 34 32  1  0
 32 33  1  0
 32 30  1  0
 36 28  1  0
 27 22  1  0
 39  6  1  0
 31 72  1  0
 31 73  1  0
 31 74  1  0
 30 71  1  1
 17 62  1  1
 18 63  1  0
 18 64  1  0
 21 65  1  0
 23 66  1  0
 24 67  1  0
 25 68  1  0
 26 69  1  0
 27 70  1  0
  9 53  1  0
  9 54  1  0
 10 55  1  0
 12 56  1  0
 12 57  1  0
 12 58  1  0
 13 59  1  0
 13 60  1  0
 13 61  1  0
  7 51  1  0
  7 52  1  0
  6 50  1  6
  5 48  1  0
  5 49  1  0
  4 47  1  1
  3 44  1  0
  3 45  1  0
  3 46  1  0
  1 42  1  0
  1 43  1  0
 40 80  1  0
 40 81  1  0
 40 82  1  0
 41 83  1  0
 41 84  1  0
 41 85  1  0
 38 79  1  0
 32 75  1  6
 33 76  1  0
 33 77  1  0
 33 78  1  0
M  END


  Mrv1652309052210222D          

 41 44  0  0  1  0            999 V2000
   -2.7210   -3.1087    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9086   -3.2520    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6264   -4.0272    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3783   -2.6200    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5564   -2.5481    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6283   -1.7262    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0980   -1.0942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4323   -2.0127    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9626   -2.6447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6804   -3.4200    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1320   -3.5632    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2107   -4.0520    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4502   -1.7981    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2661   -1.6762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7119   -1.0158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  4  2  1  1  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  6  0  0  0
  8  7  1  6  0  0  0
  8  9  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
  8 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  6  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 17 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 22 27  1  0  0  0  0
 16 28  2  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  1  0  0  0
 30 32  1  0  0  0  0
 32 33  1  6  0  0  0
 32 34  1  0  0  0  0
 34 35  2  0  0  0  0
 34 36  1  0  0  0  0
 28 36  1  0  0  0  0
 36 37  2  0  0  0  0
  8 37  1  0  0  0  0
 37 38  1  0  0  0  0
  6 39  1  0  0  0  0
  4 39  1  0  0  0  0
 39 40  1  0  0  0  0
 39 41  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0210520

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H]1OC2=C([C@H](CC(O)=O)C3=CC=CC=C3)C(=O)[C@@](CC=C(C)C)(C[C@@H]3C[C@@H](C(C)=C)C3(C)C)C(O)=C2C(=O)[C@H]1C

> <INCHI_IDENTIFIER>
InChI=1S/C35H44O6/c1-19(2)14-15-35(18-24-16-26(20(3)4)34(24,7)8)32(39)28(25(17-27(36)37)23-12-10-9-11-13-23)31-29(33(35)40)30(38)21(5)22(6)41-31/h9-14,21-22,24-26,40H,3,15-18H2,1-2,4-8H3,(H,36,37)/t21-,22-,24-,25+,26-,35+/m0/s1

> <INCHI_KEY>
XKLNMLNUCPSFOY-WWPHDACRSA-N

> <FORMULA>
C35H44O6

> <MOLECULAR_WEIGHT>
560.731

> <EXACT_MASS>
560.313789137

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
85

> <JCHEM_AVERAGE_POLARIZABILITY>
61.22662605732058

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3R)-3-[(2S,3S,6S)-6-{[(1S,3S)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-3,4,6,7-tetrahydro-2H-1-benzopyran-8-yl]-3-phenylpropanoic acid

> <JCHEM_LOGP>
6.672253909666665

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
9.43521960361485

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.161128031332505

> <JCHEM_PKA_STRONGEST_BASIC>
-4.8971946619454005

> <JCHEM_POLAR_SURFACE_AREA>
100.90000000000002

> <JCHEM_REFRACTIVITY>
162.87100000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(3R)-3-[(2S,3S,6S)-6-{[(1S,3S)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0      -5.079  -5.803   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.563  -6.070   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.036  -7.517   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.573  -4.891   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.039  -4.756   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.173  -3.222   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.183  -2.043   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.807  -3.757   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.797  -4.937   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.270  -6.384   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.246  -6.651   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.260  -7.564   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       0.000   0.000   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       0.000   4.620   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       2.667   4.620   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       4.001   2.310   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       4.001   3.850   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       5.335   4.620   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.668   3.850   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       6.668   2.310   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       5.335   0.000   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       8.002  -0.000   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0       5.335  -4.620   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0       2.667  -4.620   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0      -2.707  -3.357   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      -4.230  -3.129   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      -3.196  -1.896   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5   39                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7   39                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   14   37                                             
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11                                                            
CONECT   14    8   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17   28                                                  
CONECT   17   16   18   22                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19                                                            
CONECT   22   17   23   27                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   22                                                       
CONECT   28   16   29   36                                                  
CONECT   29   28   30                                                       
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32   35   36                                                  
CONECT   35   34                                                            
CONECT   36   34   28   37                                                  
CONECT   37   36    8   38                                                  
CONECT   38   37                                                            
CONECT   39    6    4   40   41                                             
CONECT   40   39                                                            
CONECT   41   39                                                            
MASTER        0    0    0    0    0    0    0    0   41    0   88    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₅H₄₄O₆

Average Mass

560.7310 Da

Monoisotopic Mass

560.31379 Da

IUPAC Name

(3R)-3-[(2S,3S,6S)-6-{[(1S,3S)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-3,4,6,7-tetrahydro-2H-1-benzopyran-8-yl]-3-phenylpropanoic acid

Traditional Name

(3R)-3-[(2S,3S,6S)-6-{[(1S,3S)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid

CAS Registry Number

Not Available

SMILES

C[C@@H]1OC2=C([C@H](CC(O)=O)C3=CC=CC=C3)C(=O)[C@@](CC=C(C)C)(C[C@@H]3C[C@@H](C(C)=C)C3(C)C)C(O)=C2C(=O)[C@H]1C

InChI Identifier

InChI=1S/C35H44O6/c1-19(2)14-15-35(18-24-16-26(20(3)4)34(24,7)8)32(39)28(25(17-27(36)37)23-12-10-9-11-13-23)31-29(33(35)40)30(38)21(5)22(6)41-31/h9-14,21-22,24-26,40H,3,15-18H2,1-2,4-8H3,(H,36,37)/t21-,22-,24-,25+,26-,35+/m0/s1

InChI Key

XKLNMLNUCPSFOY-WWPHDACRSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Calophyllum brasiliense	LOTUS Database	35616633

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	6.67	ChemAxon
pKa (Strongest Acidic)	4.16	ChemAxon
pKa (Strongest Basic)	-4.9	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	100.9 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	162.87 m³·mol⁻¹	ChemAxon
Polarizability	61.23 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid (NP0210520)

MOL for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

3D MOL for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

3D SDF for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

3D-SDF for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

PDB for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

3D PDB for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

SMILES for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

INCHI for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

Structure for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)

3D Structure for NP0210520 ((3r)-3-[(2s,3s,6s)-6-{[(1s,3s)-2,2-dimethyl-3-(prop-1-en-2-yl)cyclobutyl]methyl}-5-hydroxy-2,3-dimethyl-6-(3-methylbut-2-en-1-yl)-4,7-dioxo-2,3-dihydro-1-benzopyran-8-yl]-3-phenylpropanoic acid)