NP-MRD: Showing NP-Card for (1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate (NP0210317)

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Record Information

Version

2.0

Created at

2022-09-05 08:04:13 UTC

Updated at

2022-09-05 08:04:13 UTC

NP-MRD ID

NP0210317

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate

Description

(1R,3aR,4S,6aS)-1-(4,6-dimethoxy-2H-1,3-benzodioxol-5-yl)-4-(6-methoxy-2H-1,3-benzodioxol-5-yl)-hexahydrofuro[3,4-c]furan-3a-yl acetate belongs to the class of organic compounds known as furanoid lignans. These are lignans with a structure that contains either a tetrahydrofuran ring, a furan ring, or a furofuan ring system, that arises from the joining of the two phenylpropanoid units. (1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate is found in Phryma leptostachya. Based on a literature review very few articles have been published on (1R,3aR,4S,6aS)-1-(4,6-dimethoxy-2H-1,3-benzodioxol-5-yl)-4-(6-methoxy-2H-1,3-benzodioxol-5-yl)-hexahydrofuro[3,4-c]furan-3a-yl acetate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052210042D          

 36 41  0  0  1  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652309052210042D          

 36 41  0  0  1  0            999 V2000
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 31 32  1  0  0  0  0
 31 33  2  0  0  0  0
  6 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
  5 36  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0210317

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC2=C(OCO2)C=C1[C@@H]1OC[C@H]2[C@@H](OC[C@@]12OC(C)=O)C1=C(OC)C=C2OCOC2=C1OC

> <INCHI_IDENTIFIER>
InChI=1S/C25H26O11/c1-12(26)36-25-9-31-21(20-18(28-3)7-19-22(23(20)29-4)35-11-34-19)14(25)8-30-24(25)13-5-16-17(33-10-32-16)6-15(13)27-2/h5-7,14,21,24H,8-11H2,1-4H3/t14-,21+,24-,25-/m0/s1

> <INCHI_KEY>
NEVZOKDDDUKDFR-MTAMAYAYSA-N

> <FORMULA>
C25H26O11

> <MOLECULAR_WEIGHT>
502.472

> <EXACT_MASS>
502.147511657

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_ATOM_COUNT>
62

> <JCHEM_AVERAGE_POLARIZABILITY>
49.08147508184007

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,3aR,4S,6aS)-1-(4,6-dimethoxy-2H-1,3-benzodioxol-5-yl)-4-(6-methoxy-2H-1,3-benzodioxol-5-yl)-hexahydrofuro[3,4-c]furan-3a-yl acetate

> <JCHEM_LOGP>
1.8648025796666656

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-3.716517580445585

> <JCHEM_POLAR_SURFACE_AREA>
109.37000000000003

> <JCHEM_REFRACTIVITY>
119.16800000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(1R,3aR,4S,6aS)-1-(4,6-dimethoxy-2H-1,3-benzodioxol-5-yl)-4-(6-methoxy-2H-1,3-benzodioxol-5-yl)-tetrahydro-1H-furo[3,4-c]furan-3a-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0      -3.624  -4.697   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -4.100  -6.161   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      -3.069  -7.306   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.545  -8.770   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.515  -9.915   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.008  -9.595   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.532  -8.130   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.563  -6.986   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.087  -5.521   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      -1.992  -4.275   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0      -1.087  -3.029   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.378  -3.505   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.842  -3.029   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.318  -1.564   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.288  -0.420   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      -0.219  -0.740   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      -1.249   0.404   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.764   1.045   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.270   1.365   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       4.300   0.220   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.824  -1.244   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       4.855  -2.389   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       4.379  -3.853   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       5.707   0.847   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       5.546   2.378   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       4.040   2.698   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       2.747  -4.275   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       1.842  -5.521   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       0.378  -5.045   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       0.378  -6.585   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0       1.711  -7.355   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       1.711  -8.895   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0       3.045  -6.585   0.000  0.00  0.00           O+0
HETATM   34  O   UNK     0      -0.238 -10.928   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      -1.269 -12.073   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      -2.676 -11.446   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   36                                                  
CONECT    6    5    7   34                                                  
CONECT    7    6    8                                                       
CONECT    8    7    3    9                                                  
CONECT    9    8   10   29                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   29                                                  
CONECT   13   12   14   27                                                  
CONECT   14   13   15   21                                                  
CONECT   15   14   16   18                                                  
CONECT   16   15   17                                                       
CONECT   17   16                                                            
CONECT   18   15   19                                                       
CONECT   19   18   20   26                                                  
CONECT   20   19   21   24                                                  
CONECT   21   20   14   22                                                  
CONECT   22   21   23                                                       
CONECT   23   22                                                            
CONECT   24   20   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   19                                                       
CONECT   27   13   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28    9   12   30                                             
CONECT   30   29   31                                                       
CONECT   31   30   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31                                                            
CONECT   34    6   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35    5                                                       
MASTER        0    0    0    0    0    0    0    0   36    0   82    0
END

View in JSmol

Synonyms

Value	Source
(1R,3AR,4S,6as)-1-(4,6-dimethoxy-2H-1,3-benzodioxol-5-yl)-4-(6-methoxy-2H-1,3-benzodioxol-5-yl)-hexahydrofuro[3,4-c]furan-3a-yl acetic acid	Generator

Chemical Formula

C₂₅H₂₆O₁₁

Average Mass

502.4720 Da

Monoisotopic Mass

502.14751 Da

IUPAC Name

(1R,3aR,4S,6aS)-1-(4,6-dimethoxy-2H-1,3-benzodioxol-5-yl)-4-(6-methoxy-2H-1,3-benzodioxol-5-yl)-hexahydrofuro[3,4-c]furan-3a-yl acetate

Traditional Name

(1R,3aR,4S,6aS)-1-(4,6-dimethoxy-2H-1,3-benzodioxol-5-yl)-4-(6-methoxy-2H-1,3-benzodioxol-5-yl)-tetrahydro-1H-furo[3,4-c]furan-3a-yl acetate

CAS Registry Number

Not Available

SMILES

COC1=CC2=C(OCO2)C=C1[C@@H]1OC[C@H]2[C@@H](OC[C@@]12OC(C)=O)C1=C(OC)C=C2OCOC2=C1OC

InChI Identifier

InChI=1S/C25H26O11/c1-12(26)36-25-9-31-21(20-18(28-3)7-19-22(23(20)29-4)35-11-34-19)14(25)8-30-24(25)13-5-16-17(33-10-32-16)6-15(13)27-2/h5-7,14,21,24H,8-11H2,1-4H3/t14-,21+,24-,25-/m0/s1

InChI Key

NEVZOKDDDUKDFR-MTAMAYAYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Phryma leptostachya	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as furanoid lignans. These are lignans with a structure that contains either a tetrahydrofuran ring, a furan ring, or a furofuan ring system, that arises from the joining of the two phenylpropanoid units.

Kingdom

Organic compounds

Super Class

Lignans, neolignans and related compounds

Class

Furanoid lignans

Sub Class

Not Available

Direct Parent

Furanoid lignans

Alternative Parents

Substituents

Furanoid lignan
Furofuran lignan skeleton
Benzodioxole
Anisole
Furofuran
Alkyl aryl ether
Benzenoid
Tetrahydrofuran
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Acetal
Carboxylic acid derivative
Dialkyl ether
Ether
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Organic oxygen compound
Carbonyl group
Organic oxide
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.86	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	109.37 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	119.17 m³·mol⁻¹	ChemAxon
Polarizability	49.08 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163068418

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate (NP0210317)

MOL for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

3D MOL for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

3D SDF for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

3D-SDF for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

PDB for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

3D PDB for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

SMILES for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

INCHI for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

Structure for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)

3D Structure for NP0210317 ((1r,3ar,4s,6as)-1-(4,6-dimethoxy-2h-1,3-benzodioxol-5-yl)-4-(6-methoxy-2h-1,3-benzodioxol-5-yl)-tetrahydro-1h-furo[3,4-c]furan-3a-yl acetate)