NP-MRD: Showing NP-Card for methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate (NP0210179)

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Record Information

Version

2.0

Created at

2022-09-05 07:52:54 UTC

Updated at

2022-09-05 07:52:54 UTC

NP-MRD ID

NP0210179

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate

Description

Methyl (2S,3S,4R,5R,6S)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate belongs to the class of organic compounds known as flavonoid-7-o-glucuronides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to glucuronic acid at the C7-position. methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate is found in Lycopus asper. Based on a literature review very few articles have been published on methyl (2S,3S,4R,5R,6S)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052209522D          

 35 38  0  0  1  0            999 V2000
   -2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.8579   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8579   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 21 24  1  0  0  0  0
 24 25  2  0  0  0  0
 18 25  1  0  0  0  0
 17 26  1  0  0  0  0
 26 27  1  0  0  0  0
 13 27  1  0  0  0  0
 27 28  2  0  0  0  0
  9 28  1  0  0  0  0
  7 29  1  0  0  0  0
 29 30  1  6  0  0  0
 29 31  1  0  0  0  0
 31 32  1  1  0  0  0
 31 33  1  0  0  0  0
  5 33  1  0  0  0  0
 33 34  1  6  0  0  0
 34 35  1  0  0  0  0
M  END

     RDKit          3D

 59 62  0  0  0  0  0  0  0  0999 V2000
   -7.4548    2.4986    1.5722 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7272    1.5275    0.8496 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4786    1.0705    1.2379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0067    1.5744    2.2956 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7161    0.0618    0.4922 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5012   -0.1784    1.1314 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6732   -0.8122    0.1773 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3472   -0.8019    0.5359 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3498   -0.2322   -0.2288 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5295    0.3974   -1.4390 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5008    0.9594   -2.1801 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2887    1.5843   -3.3909 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7810    0.8855   -1.6794 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8657    1.4187   -2.3521 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6444    1.9760   -3.4410 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1182    1.3043   -1.7846 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3268    0.6805   -0.5769 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6418    0.5399    0.0566 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7748   -0.1004    1.2732 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0030   -0.2444    1.8884 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1499    0.2689    1.2701 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3802    0.1115    1.9103 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.5170    0.6421    1.2576 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0311    0.9036    0.0678 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7837    1.0263   -0.5135 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2676    0.1921    0.0206 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0358    0.2695   -0.4728 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9763   -0.2705    0.2196 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2448   -2.2272    0.0712 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.3655   -3.0502   -0.6055 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5812   -2.1000   -0.6295 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.1803   -3.3305   -0.8514 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4430   -1.2322    0.2865 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.6966   -0.9985   -0.2448 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6367   -1.5009    0.6339 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3531    3.5091    1.0945 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1188    2.6061    2.6063 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5279    2.2204    1.5866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4630    0.4823   -0.5253 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9361   -0.3329   -0.7801 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5294    0.4646   -1.8475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6645    1.6222   -3.7323 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9633    1.7226   -2.3140 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8665   -0.4866    1.7254 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1044   -0.7452    2.8390 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.4428    0.3911    1.8142 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.5344    0.2108    0.2292 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.4178    1.7496    1.1200 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9321    1.3013   -0.4075 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7454    1.5361   -1.4627 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1551   -0.7573    1.1667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4479   -2.5578    1.1131 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4112   -3.9459   -0.1656 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4265   -1.5278   -1.5735 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2240   -3.5534   -1.8194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5018   -1.7554    1.2813 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5256   -0.9855    1.6088 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5057   -2.6037    0.7865 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6807   -1.3785    0.2758 H   0  0  0  0  0  0  0  0  0  0  0  0
 35 34  1  0
 34 33  1  0
 33 31  1  0
 31 32  1  0
 31 29  1  0
 29 30  1  0
 29  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
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 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  2  0
 17 26  1  0
 26 27  1  0
 27 28  2  0
 17 18  1  0
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 19 20  1  0
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 22 23  1  0
 21 24  1  0
 24 25  2  0
  7  6  1  0
  6  5  1  0
  5  3  1  0
  3  4  2  0
  3  2  1  0
  2  1  1  0
  5 33  1  0
 28  9  1  0
 25 18  1  0
 27 13  1  0
 35 57  1  0
 35 58  1  0
 35 59  1  0
 33 56  1  1
 31 54  1  6
 32 55  1  0
 29 52  1  1
 30 53  1  0
  7 40  1  6
 10 41  1  0
 12 42  1  0
 16 43  1  0
 28 51  1  0
 19 44  1  0
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 23 46  1  0
 23 47  1  0
 23 48  1  0
 24 49  1  0
 25 50  1  0
  5 39  1  6
  1 36  1  0
  1 37  1  0
  1 38  1  0
M  END


  Mrv1652309052209522D          

 35 38  0  0  1  0            999 V2000
   -2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.8579   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8579   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
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 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
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 24 25  2  0  0  0  0
 18 25  1  0  0  0  0
 17 26  1  0  0  0  0
 26 27  1  0  0  0  0
 13 27  1  0  0  0  0
 27 28  2  0  0  0  0
  9 28  1  0  0  0  0
  7 29  1  0  0  0  0
 29 30  1  6  0  0  0
 29 31  1  0  0  0  0
 31 32  1  1  0  0  0
 31 33  1  0  0  0  0
  5 33  1  0  0  0  0
 33 34  1  6  0  0  0
 34 35  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0210179

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CO[C@H]1[C@H](O)[C@@H](O)[C@H](OC2=CC(O)=C3C(=O)C=C(OC3=C2)C2=CC=C(OC)C=C2)O[C@@H]1C(=O)OC

> <INCHI_IDENTIFIER>
InChI=1S/C24H24O11/c1-30-12-6-4-11(5-7-12)16-10-15(26)18-14(25)8-13(9-17(18)34-16)33-24-20(28)19(27)21(31-2)22(35-24)23(29)32-3/h4-10,19-22,24-25,27-28H,1-3H3/t19-,20-,21+,22+,24-/m1/s1

> <INCHI_KEY>
SQWURSZGOUXLIP-JXSOMUMUSA-N

> <FORMULA>
C24H24O11

> <MOLECULAR_WEIGHT>
488.445

> <EXACT_MASS>
488.131861593

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_ATOM_COUNT>
59

> <JCHEM_AVERAGE_POLARIZABILITY>
48.24500618096747

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
methyl (2S,3S,4R,5R,6S)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate

> <JCHEM_LOGP>
1.693810193999999

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.260065180065855

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.3141993543261705

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6907396107192776

> <JCHEM_POLAR_SURFACE_AREA>
150.21

> <JCHEM_REFRACTIVITY>
118.92830000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
methyl (2S,3S,4R,5R,6S)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0      -4.001   3.850   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -4.001   2.310   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      -2.667   1.540   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      -1.334   2.310   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      -2.667  -0.000   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -1.334  -0.770   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       0.000  -3.080   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       5.335   1.540   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       9.336  -2.310   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      10.669  -3.080   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      10.669  -4.620   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      12.003  -5.390   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      13.337  -4.620   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       9.336  -5.390   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       8.002  -4.620   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       5.335  -3.080   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      -2.667  -4.620   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      -4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      -5.335  -3.080   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0      -4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      -5.335  -0.000   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      -5.335   1.540   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   33                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   29                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   28                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   27                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18   26                                                  
CONECT   18   17   19   25                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22   24                                                  
CONECT   22   21   23                                                       
CONECT   23   22                                                            
CONECT   24   21   25                                                       
CONECT   25   24   18                                                       
CONECT   26   17   27                                                       
CONECT   27   26   13   28                                                  
CONECT   28   27    9                                                       
CONECT   29    7   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31    5   34                                                  
CONECT   34   33   35                                                       
CONECT   35   34                                                            
MASTER        0    0    0    0    0    0    0    0   35    0   76    0
END

View in JSmol

Synonyms

Value	Source
Methyl (2S,3S,4R,5R,6S)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}-3-methoxyoxane-2-carboxylic acid	Generator

Chemical Formula

C₂₄H₂₄O₁₁

Average Mass

488.4450 Da

Monoisotopic Mass

488.13186 Da

IUPAC Name

methyl (2S,3S,4R,5R,6S)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate

Traditional Name

methyl (2S,3S,4R,5R,6S)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate

CAS Registry Number

Not Available

SMILES

CO[C@H]1[C@H](O)[C@@H](O)[C@H](OC2=CC(O)=C3C(=O)C=C(OC3=C2)C2=CC=C(OC)C=C2)O[C@@H]1C(=O)OC

InChI Identifier

InChI=1S/C24H24O11/c1-30-12-6-4-11(5-7-12)16-10-15(26)18-14(25)8-13(9-17(18)34-16)33-24-20(28)19(27)21(31-2)22(35-24)23(29)32-3/h4-10,19-22,24-25,27-28H,1-3H3/t19-,20-,21+,22+,24-/m1/s1

InChI Key

SQWURSZGOUXLIP-JXSOMUMUSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Lycopus asper	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as flavonoid-7-o-glucuronides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to glucuronic acid at the C7-position.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Flavonoids

Sub Class

Flavonoid glycosides

Direct Parent

Flavonoid-7-O-glucuronides

Alternative Parents

Substituents

Flavonoid-7-o-glucuronide
Flavonoid-7-o-glycoside
4p-methoxyflavonoid-skeleton
Hydroxyflavonoid
5-hydroxyflavonoid
Flavone
Phenolic glycoside
1-o-glucuronide
O-glucuronide
Glucuronic acid or derivatives
O-glycosyl compound
Glycosyl compound
Chromone
1-benzopyran
Benzopyran
Phenoxy compound
Anisole
Phenol ether
Methoxybenzene
Pyranone
1-hydroxy-4-unsubstituted benzenoid
Alkyl aryl ether
1-hydroxy-2-unsubstituted benzenoid
Oxane
Monosaccharide
Pyran
Monocyclic benzene moiety
Benzenoid
Heteroaromatic compound
Vinylogous acid
Methyl ester
Secondary alcohol
1,2-diol
Carboxylic acid ester
Monocarboxylic acid or derivatives
Acetal
Ether
Oxacycle
Organoheterocyclic compound
Carboxylic acid derivative
Dialkyl ether
Organooxygen compound
Alcohol
Carbonyl group
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.69	ChemAxon
pKa (Strongest Acidic)	7.31	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	150.21 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	118.93 m³·mol⁻¹	ChemAxon
Polarizability	48.25 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162853136

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate (NP0210179)

MOL for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

3D MOL for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

3D SDF for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

3D-SDF for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

PDB for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

3D PDB for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

SMILES for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

INCHI for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

Structure for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)

3D Structure for NP0210179 (methyl (2s,3s,4r,5r,6s)-4,5-dihydroxy-6-{[5-hydroxy-2-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}-3-methoxyoxane-2-carboxylate)