NP-MRD: Showing NP-Card for ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate (NP0209478)

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Record Information

Version

2.0

Created at

2022-09-05 06:54:03 UTC

Updated at

2022-09-05 06:54:04 UTC

NP-MRD ID

NP0209478

Secondary Accession Numbers

None

Natural Product Identification

Common Name

ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate

Description

9-Hydroxy-10-oxo-9,10-dihydrophenanthrene-9-acetic acid ethyl ester belongs to the class of organic compounds known as hydrophenanthrenes. These are a phenanthrene derivative where at least one ring CC bond is substituted by hydrogenation. ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate is found in Toona ciliata. Based on a literature review very few articles have been published on 9-Hydroxy-10-oxo-9,10-dihydrophenanthrene-9-acetic acid ethyl ester.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 38 40  0  0  0  0  0  0  0  0999 V2000
    4.6874    2.1808   -0.3591 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4868    0.6796   -0.1606 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1105    0.4848    0.1811 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5891   -0.7812    0.3909 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4200   -1.7456    0.2548 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2102   -1.1166    0.7420 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2257   -0.9880   -0.4074 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5670   -1.8020   -1.4728 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0734    0.3995   -0.8408 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0744    0.9875   -1.3653 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1319    1.1955   -0.7328 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1396    2.5397   -1.1498 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2946    3.2627   -1.0356 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4266    2.6874   -0.5208 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4211    1.3460   -0.1027 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2738    0.5954   -0.2077 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2273   -0.7972    0.2142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3790   -1.4129    0.7179 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3647   -2.7437    1.1035 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2225   -3.4936    1.0024 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0915   -2.8876    0.5080 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0771   -1.5476    0.1115 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7682    2.7577   -0.1119 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9366    2.3425   -1.4499 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5060    2.5757    0.2590 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1353    0.3793    0.7094 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8067    0.1045   -1.0320 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1659   -2.1352    1.1958 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8417   -0.4293    1.5427 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5574   -1.9235   -1.5595 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2492    2.9584   -1.5434 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2832    4.3077   -1.3669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3539    3.2168   -0.4117 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3024    0.9249    0.2891 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2850   -0.8843    0.8179 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2511   -3.2122    1.4901 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2036   -4.5583    1.3063 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1838   -3.4675    0.4223 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  1  0
  7  8  1  6
  7  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22  7  1  0
 16 11  1  0
 22 17  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
  2 26  1  0
  2 27  1  0
  6 28  1  0
  6 29  1  0
  8 30  1  0
 12 31  1  0
 13 32  1  0
 14 33  1  0
 15 34  1  0
 18 35  1  0
 19 36  1  0
 20 37  1  0
 21 38  1  0
M  END


  Mrv1652309052208542D          

 22 24  0  0  0  0            999 V2000
    1.7751    0.8515    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4895    1.2640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2040    0.8515    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9185    1.2640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9185    2.0890    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6330    0.8515    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6330    0.0265    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8205    0.1697    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4454    0.1697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7276    0.9450    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9757   -0.4623    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7882   -0.3190    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3185   -0.9510    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0363   -1.7262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2239   -1.8695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6936   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8811   -1.3808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5989   -2.1560    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7865   -2.2993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2562   -1.6673    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5383   -0.8920    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3508   -0.7488    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 17 22  1  0  0  0  0
  7 22  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0209478

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCOC(=O)CC1(O)C(=O)C2=CC=CC=C2C2=CC=CC=C12

> <INCHI_IDENTIFIER>
InChI=1S/C18H16O4/c1-2-22-16(19)11-18(21)15-10-6-5-8-13(15)12-7-3-4-9-14(12)17(18)20/h3-10,21H,2,11H2,1H3

> <INCHI_KEY>
LETAZYCBVRNMHS-UHFFFAOYSA-N

> <FORMULA>
C18H16O4

> <MOLECULAR_WEIGHT>
296.322

> <EXACT_MASS>
296.104858995

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
38

> <JCHEM_AVERAGE_POLARIZABILITY>
30.289142373347033

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
ethyl 2-(9-hydroxy-10-oxo-9,10-dihydrophenanthren-9-yl)acetate

> <JCHEM_LOGP>
2.617710226333333

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.067786933300399

> <JCHEM_PKA_STRONGEST_BASIC>
-4.081349995374404

> <JCHEM_POLAR_SURFACE_AREA>
63.6

> <JCHEM_REFRACTIVITY>
81.86550000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
ethyl (9-hydroxy-10-oxophenanthren-9-yl)acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0       3.313   1.589   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.647   2.359   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       5.981   1.589   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0       7.315   2.359   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       7.315   3.899   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       8.648   1.589   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.648   0.049   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       7.132   0.317   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      10.165   0.317   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      10.691   1.764   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0      11.155  -0.863   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      12.671  -0.595   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      13.661  -1.775   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      13.134  -3.222   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.618  -3.490   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      10.628  -2.310   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       9.111  -2.577   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.585  -4.025   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       7.068  -4.292   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       6.078  -3.112   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       6.605  -1.665   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.121  -1.398   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7                                                       
CONECT    7    6    8    9   22                                             
CONECT    8    7                                                            
CONECT    9    7   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   16                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   11   17                                                  
CONECT   17   16   18   22                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   17    7                                                  
MASTER        0    0    0    0    0    0    0    0   22    0   48    0
END

View in JSmol

Synonyms

Value	Source
9-Hydroxy-10-oxo-9,10-dihydrophenanthrene-9-acetate ethyl ester	Generator

Chemical Formula

C₁₈H₁₆O₄

Average Mass

296.3220 Da

Monoisotopic Mass

296.10486 Da

IUPAC Name

ethyl 2-(9-hydroxy-10-oxo-9,10-dihydrophenanthren-9-yl)acetate

Traditional Name

ethyl (9-hydroxy-10-oxophenanthren-9-yl)acetate

CAS Registry Number

Not Available

SMILES

CCOC(=O)CC1(O)C(=O)C2=CC=CC=C2C2=CC=CC=C12

InChI Identifier

InChI=1S/C18H16O4/c1-2-22-16(19)11-18(21)15-10-6-5-8-13(15)12-7-3-4-9-14(12)17(18)20/h3-10,21H,2,11H2,1H3

InChI Key

LETAZYCBVRNMHS-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Toona ciliata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hydrophenanthrenes. These are a phenanthrene derivative where at least one ring CC bond is substituted by hydrogenation.

Kingdom

Organic compounds

Super Class

Benzenoids

Class

Phenanthrenes and derivatives

Sub Class

Hydrophenanthrenes

Direct Parent

Hydrophenanthrenes

Alternative Parents

Substituents

Hydrophenanthrene
Naphthalene
Aryl alkyl ketone
Aryl ketone
Acyloin
Tertiary alcohol
Carboxylic acid ester
Ketone
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Carbonyl group
Organooxygen compound
Alcohol
Aromatic homopolycyclic compound

Molecular Framework

Aromatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.62	ChemAxon
pKa (Strongest Acidic)	12.07	ChemAxon
pKa (Strongest Basic)	-4.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	63.6 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	81.87 m³·mol⁻¹	ChemAxon
Polarizability	30.29 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

12454672

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate (NP0209478)

MOL for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

3D MOL for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

3D SDF for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

3D-SDF for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

PDB for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

3D PDB for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

SMILES for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

INCHI for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

Structure for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)

3D Structure for NP0209478 (ethyl 2-(9-hydroxy-10-oxophenanthren-9-yl)acetate)