NP-MRD: Showing NP-Card for (1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine (NP0208465)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-05 05:28:49 UTC

Updated at

2022-09-05 05:28:49 UTC

NP-MRD ID

NP0208465

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine

Description

Conessimine belongs to the class of organic compounds known as azaspirodecane derivatives. These are organic compounds containing a spirodecane moiety with at least one nitrogen atom. (1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine is found in Holarrhena pubescens. (1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine was first documented in 2017 (PMID: 28684718). Based on a literature review very few articles have been published on Conessimine (PMID: 32962166).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052207282D          

 25 29  0  0  1  0            999 V2000
   -0.0401   -0.2817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7847   -0.2673    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2579    0.4086    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0468    0.1675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0613   -0.6574    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3836    0.1020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2024    0.2027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6990   -0.4562    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3767   -1.2156    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8733   -1.8745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6921   -1.7738    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0144   -1.0144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8332   -0.9138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1555   -0.1543    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.9744   -0.0537    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.2966    0.7057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4709   -0.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6590    0.5045    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8401    0.4039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5178   -0.3556    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0213    0.3033    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5579   -1.3162    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0847   -1.9921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2958   -1.7510    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2813   -0.9261    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  8  7  1  6  0  0  0
  8  9  1  0  0  0  0
  9 10  1  1  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  6  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 14 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 12 20  1  0  0  0  0
  8 20  1  0  0  0  0
 20 21  1  6  0  0  0
  9 22  1  0  0  0  0
  5 22  1  0  0  0  0
 22 23  1  6  0  0  0
 23 24  1  0  0  0  0
 25 24  1  6  0  0  0
  2 25  1  0  0  0  0
  5 25  1  0  0  0  0
M  END

     RDKit          3D

 63 67  0  0  0  0  0  0  0  0999 V2000
   -6.3848    0.7190   -0.3083 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0624    1.2091    0.2075 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.2620    1.7551   -0.8578 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1164    0.8423   -1.0122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8622    0.4629    0.3974 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1468    1.4714    1.2016 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6897    1.4997    0.8948 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0118    0.1931    0.8435 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7814   -0.9211    0.1933 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1920   -2.2259    0.7360 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2341   -2.2049    0.3238 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8912   -1.0811    0.0505 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3041   -1.2162   -0.3367 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2110   -0.2339    0.3661 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.4950   -0.3567   -0.2179 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.1929    0.8197   -0.5785 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3348   -1.3821    0.3019 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6265    1.1662    0.2329 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2586    1.1631    0.8275 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3104    0.2757    0.0858 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1217    0.7128   -1.3498 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1996   -0.8715    0.5884 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.1179   -1.7956   -0.1181 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4749   -1.2327    0.1922 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2518    0.1248    0.8662 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.6801   -0.2422    0.1689 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3018    0.6395   -1.4136 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1623    1.4584   -0.0474 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2410    1.9917    1.0031 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9500    2.7248   -0.6308 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2960    1.3900   -1.5190 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4745    0.0121   -1.6162 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5639    2.4851    0.9280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3889    1.3465    2.2793 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2195    2.0966    1.7325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4889    2.1101   -0.0130 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2917   -0.0958    1.8880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6674   -0.9206   -0.9064 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7495   -3.1174    0.4432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1635   -2.0949    1.8575 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7344   -3.1483    0.2603 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4064   -1.1287   -1.4197 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7076   -2.2309   -0.0207 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2397   -0.4761    1.4499 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7685    0.6279   -1.5071 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9863    1.0338    0.1986 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5935    1.7224   -0.7369 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8875   -1.8581   -0.5512 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7052   -2.2135    0.7425 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0678   -1.0119    1.0285 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5991    1.4707   -0.8388 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2558    1.8538    0.8334 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8492    2.2075    0.7382 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2792    0.8623    1.8890 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6941    1.6238   -1.5977 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0497    0.9118   -1.5963 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4670   -0.0880   -2.0821 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2837   -1.1081    1.6869 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0234   -2.8407    0.2940 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9262   -1.9090   -1.2088 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0140   -1.9107    0.8876 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0660   -1.1435   -0.7323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3489    0.0765    1.9511 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  5  4  1  6
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 14 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  6
 14 15  1  0
 15 16  1  0
 15 17  1  0
  9 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25  2  1  0
 22  5  1  0
 25  5  1  0
 20  8  1  0
 20 12  1  0
  1 26  1  0
  1 27  1  0
  1 28  1  0
  2 29  1  1
  3 30  1  0
  4 31  1  0
  4 32  1  0
  6 33  1  0
  6 34  1  0
  7 35  1  0
  7 36  1  0
  8 37  1  1
  9 38  1  6
 10 39  1  0
 10 40  1  0
 11 41  1  0
 13 42  1  0
 13 43  1  0
 14 44  1  1
 18 51  1  0
 18 52  1  0
 19 53  1  0
 19 54  1  0
 21 55  1  0
 21 56  1  0
 21 57  1  0
 16 45  1  0
 16 46  1  0
 16 47  1  0
 17 48  1  0
 17 49  1  0
 17 50  1  0
 22 58  1  1
 23 59  1  0
 23 60  1  0
 24 61  1  0
 24 62  1  0
 25 63  1  1
M  END


  Mrv1652309052207282D          

 25 29  0  0  1  0            999 V2000
   -0.0401   -0.2817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7847   -0.2673    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2579    0.4086    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0468    0.1675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0613   -0.6574    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3836    0.1020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2024    0.2027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6990   -0.4562    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3767   -1.2156    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8733   -1.8745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6921   -1.7738    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0144   -1.0144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8332   -0.9138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1555   -0.1543    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.9744   -0.0537    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.2966    0.7057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4709   -0.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6590    0.5045    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8401    0.4039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5178   -0.3556    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0213    0.3033    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5579   -1.3162    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0847   -1.9921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2958   -1.7510    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2813   -0.9261    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  8  7  1  6  0  0  0
  8  9  1  0  0  0  0
  9 10  1  1  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  6  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 14 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 12 20  1  0  0  0  0
  8 20  1  0  0  0  0
 20 21  1  6  0  0  0
  9 22  1  0  0  0  0
  5 22  1  0  0  0  0
 22 23  1  6  0  0  0
 23 24  1  0  0  0  0
 25 24  1  6  0  0  0
  2 25  1  0  0  0  0
  5 25  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0208465

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H]1NC[C@]23CC[C@H]4[C@@H](CC=C5C[C@H](CC[C@]45C)N(C)C)[C@@H]2CC[C@H]13

> <INCHI_IDENTIFIER>
InChI=1S/C23H38N2/c1-15-19-7-8-21-18-6-5-16-13-17(25(3)4)9-11-22(16,2)20(18)10-12-23(19,21)14-24-15/h5,15,17-21,24H,6-14H2,1-4H3/t15-,17-,18+,19+,20-,21-,22-,23-/m0/s1

> <INCHI_KEY>
PHYSDIZFXRPRAH-ALCLCTQTSA-N

> <FORMULA>
C23H38N2

> <MOLECULAR_WEIGHT>
342.571

> <EXACT_MASS>
342.303499232

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
63

> <JCHEM_AVERAGE_POLARIZABILITY>
43.493813965042776

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2S,5S,6S,9R,12S,13R,16S)-N,N,6,13-tetramethyl-7-azapentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icos-18-en-16-amine

> <JCHEM_LOGP>
3.6461086943333343

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
2

> <JCHEM_PKA_STRONGEST_BASIC>
11.505372157758316

> <JCHEM_POLAR_SURFACE_AREA>
15.27

> <JCHEM_REFRACTIVITY>
106.4571

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,5S,6S,9R,12S,13R,16S)-N,N,6,13-tetramethyl-7-azapentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icos-18-en-16-amine

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0      -0.075  -0.526   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.465  -0.499   0.000  0.00  0.00           C+0
HETATM    3  N   UNK     0       2.348   0.763   0.000  0.00  0.00           N+0
HETATM    4  C   UNK     0       3.821   0.313   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.848  -1.227   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.449   0.190   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.978   0.378   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.905  -0.852   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.303  -2.269   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.230  -3.499   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.759  -3.311   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       9.360  -1.894   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      10.889  -1.706   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      11.490  -0.288   0.000  0.00  0.00           C+0
HETATM   15  N   UNK     0      13.019  -0.100   0.000  0.00  0.00           N+0
HETATM   16  C   UNK     0      13.620   1.317   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.946  -1.330   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      10.563   0.942   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       9.035   0.754   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       8.433  -0.664   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       7.506   0.566   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.775  -2.457   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       3.892  -3.719   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.419  -3.268   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.392  -1.729   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   25                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   22   25                                             
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   20                                                  
CONECT    9    8   10   22                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   20                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   18                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15                                                            
CONECT   18   14   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   12    8   21                                             
CONECT   21   20                                                            
CONECT   22    9    5   23                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24    2    5                                                  
MASTER        0    0    0    0    0    0    0    0   25    0   58    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₃₈N₂

Average Mass

342.5710 Da

Monoisotopic Mass

342.30350 Da

IUPAC Name

(1R,2S,5S,6S,9R,12S,13R,16S)-N,N,6,13-tetramethyl-7-azapentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icos-18-en-16-amine

Traditional Name

(1R,2S,5S,6S,9R,12S,13R,16S)-N,N,6,13-tetramethyl-7-azapentacyclo[10.8.0.0^{2,9}.0^{5,9}.0^{13,18}]icos-18-en-16-amine

CAS Registry Number

Not Available

SMILES

C[C@@H]1NC[C@]23CC[C@H]4[C@@H](CC=C5C[C@H](CC[C@]45C)N(C)C)[C@@H]2CC[C@H]13

InChI Identifier

InChI=1S/C23H38N2/c1-15-19-7-8-21-18-6-5-16-13-17(25(3)4)9-11-22(16,2)20(18)10-12-23(19,21)14-24-15/h5,15,17-21,24H,6-14H2,1-4H3/t15-,17-,18+,19+,20-,21-,22-,23-/m0/s1

InChI Key

PHYSDIZFXRPRAH-ALCLCTQTSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Holarrhena pubescens	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as azaspirodecane derivatives. These are organic compounds containing a spirodecane moiety with at least one nitrogen atom.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Azaspirodecane derivatives

Sub Class

Not Available

Direct Parent

Azaspirodecane derivatives

Alternative Parents

Substituents

Azaspirodecane
Pyrrolidine
Tertiary aliphatic amine
Tertiary amine
Azacycle
Secondary amine
Secondary aliphatic amine
Organic nitrogen compound
Hydrocarbon derivative
Organonitrogen compound
Amine
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.65	ChemAxon
pKa (Strongest Basic)	11.51	ChemAxon
Physiological Charge	2	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	15.27 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	106.46 m³·mol⁻¹	ChemAxon
Polarizability	43.49 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00028718

Chemspider ID

31147402

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

12303831

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Nnadi CO, Nwodo NJ, Kaiser M, Brun R, Schmidt TJ: Steroid Alkaloids from Holarrhena africana with Strong Activity against Trypanosoma brucei rhodesiense. Molecules. 2017 Jul 6;22(7). pii: molecules22071129. doi: 10.3390/molecules22071129. [PubMed:28684718 ]
Zahara K, Panda SK, Swain SS, Luyten W: Metabolic Diversity and Therapeutic Potential of Holarrhena pubescens: An Important Ethnomedicinal Plant. Biomolecules. 2020 Sep 18;10(9). pii: biom10091341. doi: 10.3390/biom10091341. [PubMed:32962166 ]
LOTUS database [Link]

Showing NP-Card for (1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine (NP0208465)

MOL for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

3D MOL for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

3D SDF for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

3D-SDF for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

PDB for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

3D PDB for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

SMILES for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

INCHI for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

Structure for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)

3D Structure for NP0208465 ((1r,2s,5s,6s,9r,12s,13r,16s)-n,n,6,13-tetramethyl-7-azapentacyclo[10.8.0.0²,⁹.0⁵,⁹.0¹³,¹⁸]icos-18-en-16-amine)